prot_H-paniculata_contig1381.2338.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1381.2338.1
Unique Nameprot_H-paniculata_contig1381.2338.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length586
Homology
BLAST of mRNA_H-paniculata_contig1381.2338.1 vs. uniprot
Match: D8LDA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA0_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 2.060e-91
Identity = 213/579 (36.79%), Postives = 256/579 (44.21%), Query Frame = 0
Query:   18 RNANAVRKPSESLLNLSLFCSSGNRRELPLCGDVVAAAGGCYAIDAEMVTVRVRGRDT----RAMVSVGIVNDRLETVLYSRVAVPEGCEVIDGAFARVQGGLWASWGEGIPASCVSDLLVRHTLIGGLIIGWELHGDLEVVGFEKAAALAKEGEREGLPLDVTSLLDNRDDSVAASAASNSSMVQTXXXXXAKAKINQSQPEPQRHQTRNGEPKKTNEYLNATTGHLIGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAASNSNTPMLDKMSRNSDDRTGNEQLGKAPCDVARTTTSDSEAERREPNCRSLQHNGEDEKECEAERVCVAHERGGGVSAGANGGVAGAGIEGGLERIEEKNAAEGLMEGEPTMTVVDVTDLFRTTKGLKCMLSEAYSCVFGRTEQGAHNAATDARMTMELYNVWRRVGEPEGPIGIPLCFFVVNFHSFKNPKSRQEILWNVLRPDRGGRATVS-------EKDSGMNTYKLFFRNERERDAYLTLLQARMAAEGLKWGETKEAVPGRKGAKDGYQLSCGKFKMHVLEHDR 585
            R  NAVRKPS+        C  G           + A    YA+D EMVT+   G +     RAMVSVG+V++RLET+LY RVAVP GC+V DG FAR+QGGL A+W EGIPASCVSD L RH   GG+++GWELH DL V+GFEKAA+  + GERE LP +                               +A I+                               GGS                                                       TA  N +                              T+S S A  R                                                   +E  +AA     G   M VV+VTDLFRT  GLKC L EAY+  F R E+GAHNAA DARMTMEL+N+WRR GEP  P+G+PL FF+VNFHSFK  +SRQ  L  +LRP+ GG   +        EKDSG NTYKL FR+   R+AYL  L+ +M A GL W    E V G+KGA+DGYQLSCG FKMHVLE DR
Sbjct:    5 RPPNAVRKPSQPF-----SCHRG-----------IDAGARYYAVDIEMVTIE--GPEDLPARRAMVSVGVVDERLETLLYGRVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFLTRHVEEGGVLVGWELHSDLNVLGFEKAASQIRSGEREVLPTE-------------------------------RAPID-------------------------------GGSLSFK---------------------------------------------------TAPGNGSN-----------------------------TSSSSTARSR--------------------------------------------------AVESPDAAAWPWVGRRRMRVVEVTDLFRTMNGLKCTLQEAYAHCFDRMEEGAHNAAADARMTMELFNLWRRAGEPREPLGLPLSFFLVNFHSFKPSRSRQASL-GMLRPEGGGAGGLGRGIHGALEKDSGSNTYKLKFRSREGREAYLHCLERKMLAAGLAWEAAPEFVCGKKGARDGYQLSCGSFKMHVLERDR 372          
BLAST of mRNA_H-paniculata_contig1381.2338.1 vs. uniprot
Match: A0A835YNX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.730e-24
Identity = 75/182 (41.21%), Postives = 100/182 (54.95%), Query Frame = 0
Query:  411 GEPTMTVVDVTDLFRTTKGLKCMLSEAYSCVF-GRTEQ--GAHNAATDARMTMELYNVWRRVGEPEGPIGIPLCFFVVNFHSFKNPKSRQE---ILWNVLRPDRGGRATVSEKDSGMNTYKLFFRNERERDAYLTLLQARMAAEGLKWGETKEAVP-GRKGAKDGYQLSCGKFKMHVLEHDR 585
            G  ++ VVD++D FR+    KC LSEAY  VF  R  Q  GAH+AA DAR+ MEL+  WRR G P   + + L F+VVN H  +   + QE    L+  LRP+RG R  V E+D G N +KL FR E ER AY+ +++ RM A     G +  A   G +      + SC  F  H+ E  R
Sbjct:  157 GGVSVRVVDLSDHFRSLHNSKCQLSEAYRAVFEDRPAQHWGAHHAAADARLCMELFRRWRRGGCPRS-VPLNLKFYVVNVHGLRRGGAHQERHQTLFEYLRPERGNRGVVLEQDDGRN-FKLKFREENERAAYMCIVRRRMQAAHEDLGPSLPAQESGSEKVTAAVRYSCRLFTAHLYEITR 336          
BLAST of mRNA_H-paniculata_contig1381.2338.1 vs. uniprot
Match: A0A8J6C368_DIALT (C3H1-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C368_DIALT)

HSP 1 Score: 74.7 bits (182), Expect = 9.910e-11
Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   46 PLCGDVVAAAGGCYAIDAEMVTVRV-RGRDTRAM---VSVGIVNDRLETVLYSRVAVPEGCEVIDGAFARVQGGLWASWGEGIPASCVSDLLVRHTLIGGLIIGWELHGDLEVVGFE 158
            P+ G  +      +A+D E + VR  +G D R     VSVGIV++ LET+LY+RV +P  C+V D AFAR  G L   W  GI       L+      G +++GW++  DL  +  E
Sbjct:   71 PIDGQALNNGQRAFAVDCEFIQVRQGKGLDAREFSVTVSVGIVSEMLETILYARVRMPARCQVWDDAFARTVGALQPDWALGIRVDIACALVREFVDDGHILVGWQIEQDLRGLKLE 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1381.2338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDA0_ECTSI2.060e-9136.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNX9_9STRA1.730e-2441.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J6C368_DIALT9.910e-1136.75C3H1-type domain-containing protein n=1 Tax=Diacro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1381contigH-paniculata_contig1381:3105..12209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1381.2338.1mRNA_H-paniculata_contig1381.2338.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1381 1253..12961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1381.2338.1 ID=prot_H-paniculata_contig1381.2338.1|Name=mRNA_H-paniculata_contig1381.2338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=586bp
MAVVPQRPVVEPEPLHPRNANAVRKPSESLLNLSLFCSSGNRRELPLCGD
VVAAAGGCYAIDAEMVTVRVRGRDTRAMVSVGIVNDRLETVLYSRVAVPE
GCEVIDGAFARVQGGLWASWGEGIPASCVSDLLVRHTLIGGLIIGWELHG
DLEVVGFEKAAALAKEGEREGLPLDVTSLLDNRDDSVAASAASNSSMVQT
TTATTAKAKINQSQPEPQRHQTRNGEPKKTNEYLNATTGHLIGGSGGGGG
GCDNSGAASPISRSSTQQTSQDNGGEAEEHNNAAATSNNSSSSSSGSCCG
TAASNSNTPMLDKMSRNSDDRTGNEQLGKAPCDVARTTTSDSEAERREPN
CRSLQHNGEDEKECEAERVCVAHERGGGVSAGANGGVAGAGIEGGLERIE
EKNAAEGLMEGEPTMTVVDVTDLFRTTKGLKCMLSEAYSCVFGRTEQGAH
NAATDARMTMELYNVWRRVGEPEGPIGIPLCFFVVNFHSFKNPKSRQEIL
WNVLRPDRGGRATVSEKDSGMNTYKLFFRNERERDAYLTLLQARMAAEGL
KWGETKEAVPGRKGAKDGYQLSCGKFKMHVLEHDR*
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