prot_H-paniculata_contig13683.2269.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13683.2269.1
Unique Nameprot_H-paniculata_contig13683.2269.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: A0A6H5K9I6_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I6_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 1.340e-95
Identity = 147/164 (89.63%), Postives = 156/164 (95.12%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSKRQREAK 164
            +C EL+ETLLELGVDCTPLHSLLGQRRR AALGKFKSQQTKVL+STDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGT L LCP+V+EDDVLKLLN VAKASRVA+MRLMEQGFDERE  IK+R+ RQRE+K
Sbjct:   58 KCQELSETLLELGVDCTPLHSLLGQRRRTAALGKFKSQQTKVLISTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTPLGLCPEVEEDDVLKLLNQVAKASRVARMRLMEQGFDERETSIKERNSRQRESK 221          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: D7FU40_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU40_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 8.720e-91
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSKRQREAK 164
            +C EL+ETL+ELGVDCTPLHSLLGQRRR AALGKFKSQQTKVL+STDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGT L LCP+V+EDDVLKLLN VAKASRVA+MRLMEQGFDERE  IK+R+ RQRE+K
Sbjct:  403 KCQELSETLVELGVDCTPLHSLLGQRRRTAALGKFKSQQTKVLISTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTPLGLCPEVEEDDVLKLLNQVAKASRVARMRLMEQGFDERETSIKERNSRQRESK 566          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: A0A836CIA6_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIA6_9STRA)

HSP 1 Score: 238 bits (606), Expect = 6.260e-74
Identity = 118/163 (72.39%), Postives = 143/163 (87.73%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSKRQREA 163
            RC E+ ETLL+L +DC  LHS++ Q+RR+AALGKFKS Q+++LVSTDV+SRGLDIP VDLV+NFD+PRVATDYVHRVGRTARAGRRGRA+SLV+QYD+ELVHNIE+YT T L LC +V E DVLKLLNP+ KA+RVA+MRLME GFDE+E + K RS R+R+A
Sbjct:  304 RCQEVCETLLQLRLDCVCLHSMMSQKRRLAALGKFKSSQSRILVSTDVSSRGLDIPEVDLVVNFDMPRVATDYVHRVGRTARAGRRGRALSLVTQYDVELVHNIEEYTSTKLDLCEEVIEKDVLKLLNPINKATRVARMRLMELGFDEKEQQRKSRSTRKRQA 466          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: A0A7S2ALE1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALE1_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.030e-63
Identity = 106/164 (64.63%), Postives = 133/164 (81.10%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSKRQREAK 164
            RC E+   LLELG+DC  +HSLL QRRR AALGKFK+  TK+L++TDVASRGLDIP VDLVINFD+PR  +D+VHRVGRTAR GRRG A+SLV+Q+D+ELVH IE++TG  L+L   + +D+VL LLNPVAKA RVA+ +L+E GFDE+   +K R+ RQR+AK
Sbjct:  301 RCQEVTMVLLELGIDCVCIHSLLSQRRRTAALGKFKTHTTKILIATDVASRGLDIPEVDLVINFDLPRAPSDFVHRVGRTARRGRRGNAISLVTQHDVELVHAIEEFTGFKLSLRKGITDDNVLPLLNPVAKAMRVARQKLVEIGFDEKVQNLKARANRQRKAK 464          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: W7UCM8_9STRA (Atp-dependent rna helicase ddx49-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCM8_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.170e-58
Identity = 99/159 (62.26%), Postives = 126/159 (79.25%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSKR 159
            RC E+AE LLE G+    LHS+L Q+RR+AALGKFKS   +VLVSTDVASRGLDIP V LV+N+D+PR++TDY+HRVGRTARAGR GRAVS+V+QYD+ L+  +E  TG  +  C +V E++V++LLNPVAKA+R A+MRLME GFDE+     +R KR
Sbjct:  344 RCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKR 502          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: A0A7S2Y019_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y019_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.520e-56
Identity = 99/158 (62.66%), Postives = 118/158 (74.68%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSK 158
            +C EL E L E+GV    LHSLL Q RRMAAL KFKSQQ  VLVSTDVASRGLDIP+VDLVIN D+PR   DYVHRVGRTARAG+ G AVSLV+  ++ LV   E Y G  L  CP V + +VL+ LNPVAKA RVAK+RL++QGF+++   +K+R K
Sbjct:   89 KCQELCEVLTEVGVGAVALHSLLTQPRRMAALAKFKSQQVGVLVSTDVASRGLDIPSVDLVINHDLPRTPVDYVHRVGRTARAGKGGTAVSLVTPAEVGLVQAAEAYAGVKLEECPQVVQRNVLRRLNPVAKAQRVAKLRLLQQGFEDKVLAMKERKK 246          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: A0A7S1D8A5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8A5_CYCTE)

HSP 1 Score: 181 bits (460), Expect = 1.250e-55
Identity = 95/153 (62.09%), Postives = 119/153 (77.78%), Query Frame = 0
Query:   14 VDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDE-----REGRIKDRSKRQR 161
            V+   LHSLL Q RR+AALGKFKSQ  ++LV+TDVASRGLDIP+VDLVIN ++PR A  YVHRVGRTARAGRRGRAVSLV++ D+ LVH  E+ TG  L  C D+ +D  +KLL PV KASR+AKM+LM+ GFDE     +E +++DR +R+R
Sbjct:    1 VENVALHSLLSQNRRLAALGKFKSQHVRILVATDVASRGLDIPSVDLVINAELPRDAVSYVHRVGRTARAGRRGRAVSLVAETDVSLVHATEKLTGRPLEKCNDITDDMAIKLLGPVTKASRLAKMKLMDIGFDELVKKMKERKVRDRKERER 153          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: A0A7S2K3W1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3W1_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.990e-53
Identity = 89/148 (60.14%), Postives = 112/148 (75.68%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDE 148
            R   +   L ELGVDC  LHS+L Q RR AALGKFKSQ  +VLV+TDVASRGLDIP VDLV+N ++PR A DY+HRVGRTARAGRRG AVSLV + D+ LVH  E+ +G +L  C  V + D L+++NPVAKA+R+ K+++ E GFD+
Sbjct:   73 RAARMEGMLFELGVDCVALHSILSQDRRRAALGKFKSQHVRVLVATDVASRGLDIPEVDLVLNAELPRKAADYIHRVGRTARAGRRGLAVSLVGEGDVALVHAAEKLSGRSLEKCDAVTDKDALRMMNPVAKATRLTKVKMAEVGFDD 220          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: A0A7S1Z4R2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4R2_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.590e-52
Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSKRQR 161
            R   ++  L ELGVD   LHSLL Q RR+AALGKFKSQQ +VLV+TDVASRGLDIP VDLV+N  +PR A DY+HRVGRTARAGRRGRAVSLV + D+ LVH  E+ +G  +  C DV +DD ++LL  V+KA+R+ KM+LM+ GFD+   R K+R  R R
Sbjct:  422 RSAHVSGILSELGVDNVSLHSLLSQNRRLAALGKFKSQQVRVLVATDVASRGLDIPTVDLVVNAQLPRRAVDYIHRVGRTARAGRRGRAVSLVCETDVSLVHAAEEMSGRKMDKCNDVTDDDAVRLLGSVSKAARLTKMKLMDIGFDDLVKRQKERKARDR 582          
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Match: K0SBG2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBG2_THAOC)

HSP 1 Score: 184 bits (466), Expect = 4.790e-52
Identity = 96/164 (58.54%), Postives = 122/164 (74.39%), Query Frame = 0
Query:    1 RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDEREGRIKDRSKRQREAK 164
            RC  +A  L ELG+    LHSLL Q RR+A+LG F+SQ+ +V+V+TDVASRGLD+P VDLVIN ++PR   DYVHRVGRTARAGRRGRAVSLV + DI+LVH  E+ +G  L  C DV ++  ++LL PVAKASR+ KM+LM+ GFDE   R + R +R R A+
Sbjct:  430 RCAHIAGILTELGISNVALHSLLSQNRRLASLGMFQSQRVRVMVATDVASRGLDVPEVDLVINAELPRRDVDYVHRVGRTARAGRRGRAVSLVGEQDIDLVHQAERISGRKLEKCSDVTDNMAVRLLGPVAKASRLTKMKLMDIGFDELVERHRKRKRRDRRAR 593          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13683.2269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9I6_9PHAE1.340e-9589.63Helicase C-terminal domain-containing protein n=1 ... [more]
D7FU40_ECTSI8.720e-9189.02DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836CIA6_9STRA6.260e-7472.39DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2ALE1_9STRA1.030e-6364.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7UCM8_9STRA2.170e-5862.26Atp-dependent rna helicase ddx49-like protein n=2 ... [more]
A0A7S2Y019_9STRA2.520e-5662.66Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1D8A5_CYCTE1.250e-5562.09Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2K3W1_9STRA1.990e-5360.14Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S1Z4R2_9STRA3.590e-5260.25Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0SBG2_THAOC4.790e-5258.54Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 3..84
e-value: 8.6E-30
score: 115.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 9..84
e-value: 3.0E-23
score: 82.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..124
score: 19.621
NoneNo IPR availableGENE3D3.40.50.300coord: 1..163
e-value: 7.7E-42
score: 145.5
NoneNo IPR availablePANTHERPTHR24031:SF676ATP-DEPENDENT RNA HELICASE DDX49-RELATEDcoord: 9..158
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 9..158
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13683contigH-paniculata_contig13683:532..2311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13683.2269.1mRNA_H-paniculata_contig13683.2269.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13683 532..2311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13683.2269.1 ID=prot_H-paniculata_contig13683.2269.1|Name=mRNA_H-paniculata_contig13683.2269.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
RCHELAETLLELGVDCTPLHSLLGQRRRMAALGKFKSQQTKVLVSTDVAS
RGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIEL
VHNIEQYTGTALALCPDVKEDDVLKLLNPVAKASRVAKMRLMEQGFDERE
GRIKDRSKRQREAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase