prot_H-paniculata_contig1359.2218.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1359.2218.1
Unique Nameprot_H-paniculata_contig1359.2218.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length589
Homology
BLAST of mRNA_H-paniculata_contig1359.2218.1 vs. uniprot
Match: A0A6H5JQ60_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQ60_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 4.760e-24
Identity = 77/259 (29.73%), Postives = 128/259 (49.42%), Query Frame = 0
Query:  326 RWIALTAALQVSDIPVASGCMGAAQHDSAALIAADMPRLQGEPDDKQVVEMVLRNFCTMYPGVGYNQGYDSACMAIYLATGRNSGATLSVFAKWAACTGVFMFQVAEGEHQAACEKAAAYARLALRKHASFVFLWLSRDPVMVDGFDIGDSQTLLANVFLRPLVSLCSRLQFRDEVLGDIVDKVLVQGKDGSAVSLWVACTLMCIAAREDGGRRRRRGEVMSVARRLDQVSANVHSWNRLEASACISLHNFIRGFRIAV 584
            R + L   + V D+P  +G     +  S  L   D  RL         V+ +      ++P +GYNQG+D++C AI++  G N G   +VF KWA     +M        Q     A  Y    ++ HA+ V  WL RDP++    D   + T+LA++F+ PL + CSRL     V+ DIV++ +  G  G AV+++V  +L+C+A ++          V+ V   L   +++V S+  +   A +SL +F+ G+R A+
Sbjct:  182 RLLDLARKINVQDMPRRAGFR---RQGSDELFEVDRSRLGVSDAVAAAVKEICTKLAAVFPVIGYNQGFDASCKAIFICVGGNLGVAAAVFTKWAVPL-AWMMMNPYRHGQLGINTAMRYTWSVIKMHAAPVSGWLCRDPIVGCDEDNEMADTILAHIFMEPLSTFCSRLGLPQCVINDIVEETMRAGVHGPAVTIFVVMSLLCLAEKQGA---EDADVVVMVKVPLMAAASSVKSFQDILEHAPVSLEHFLTGYRAAM 433          
BLAST of mRNA_H-paniculata_contig1359.2218.1 vs. uniprot
Match: A0A6H5K5C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C0_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 6.460e-23
Identity = 77/259 (29.73%), Postives = 127/259 (49.03%), Query Frame = 0
Query:  326 RWIALTAALQVSDIPVASGCMGAAQHDSAALIAADMPRLQGEPDDKQVVEMVLRNFCTMYPGVGYNQGYDSACMAIYLATGRNSGATLSVFAKWAACTGVFMFQVAEGEHQAACEKAAAYARLALRKHASFVFLWLSRDPVMVDGFDIGDSQTLLANVFLRPLVSLCSRLQFRDEVLGDIVDKVLVQGKDGSAVSLWVACTLMCIAAREDGGRRRRRGEVMSVARRLDQVSANVHSWNRLEASACISLHNFIRGFRIAV 584
            R + L   + V D+P  +G     +  S  L   D  RL         V+ +      ++P +GYNQG+D++C AI++  G N G   +VF KWA     +M        Q     A  Y    ++ HA+ V  WL RDP++    D   + T+LA++F+ PL + CSRL     V+ DIV++ +  G  G AV+++V  +L+C+A ++          V+ V   L   +++V S+  +   A +SL +F+ G R A+
Sbjct:  187 RLLDLARKINVQDMPRRAGFR---RQGSDELFEVDRSRLGVSDAVAAAVKEICTKLAAVFPVIGYNQGFDASCKAIFICVGGNLGVAAAVFTKWAVPL-AWMMMNPYRHGQLGINTAMRYTWSVIKMHAAPVSGWLCRDPIVGCDEDNEMADTILAHIFMEPLSTFCSRLGLPQCVINDIVEETMRAGVHGPAVTIFVVMSLLCLAEKQGA---EDADVVVMVKVPLMAAASSVKSFQDILEHAPVSLEHFLTGCRAAM 438          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1359.2218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQ60_9PHAE4.760e-2429.73Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K5C0_9PHAE6.460e-2329.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1359contigH-paniculata_contig1359:15960..26156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1359.2218.1mRNA_H-paniculata_contig1359.2218.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1359 15671..26735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1359.2218.1 ID=prot_H-paniculata_contig1359.2218.1|Name=mRNA_H-paniculata_contig1359.2218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=589bp
MGPHSAIGTLRVGITSPEDMMDASVSLRTAPPESSYRLCDHPSIMCCSGS
PQTSAKSFWVSARDNCVPLQNRSVGAETSRTATATPASSTHTSQNISSVD
HKTRTRFADEVEDGDDFFDIRPALLLYDRCTVADHCCSNGDTHDVICGGI
KPQIEPVLVENIGDDGEPVLSSVRGSSSAPPCQQQPPPHPTTQPNQVLTS
AASVVSETLLFSVEEPHQIIRDNSAEAWATGGRTHSATRHHRAAVVVHHS
PKDSSSNRRVTNRRIQGGDENRRRYRRSQPQQQEPLIEVLWKGTFEFLDE
FARKSWRKALEFIRHFTGGSYRRAMRWIALTAALQVSDIPVASGCMGAAQ
HDSAALIAADMPRLQGEPDDKQVVEMVLRNFCTMYPGVGYNQGYDSACMA
IYLATGRNSGATLSVFAKWAACTGVFMFQVAEGEHQAACEKAAAYARLAL
RKHASFVFLWLSRDPVMVDGFDIGDSQTLLANVFLRPLVSLCSRLQFRDE
VLGDIVDKVLVQGKDGSAVSLWVACTLMCIAAREDGGRRRRRGEVMSVAR
RLDQVSANVHSWNRLEASACISLHNFIRGFRIAVGSTS*
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