prot_H-paniculata_contig13479.2164.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13479.2164.1
Unique Nameprot_H-paniculata_contig13479.2164.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: A0A6H5KLJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLJ2_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 6.100e-109
Identity = 158/196 (80.61%), Postives = 172/196 (87.76%), Query Frame = 0 
Query:    1 QTRDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGGSKDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKVRKV 196
            ++RDFTGAVTLLEFNRRSGEDE LEDTL+WLGYCAFHLGNY++AI+AYQE+ S+GG+ +VTL              AE AAK+GPEC LKNR+LFHVSHK+LDENKLM YHQKL+DTNEDQLSLA IHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK   V
Sbjct:    9 KSRDFTGAVTLLEFNRRSGEDETLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNV 204
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BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: D8LBC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBC6_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 3.550e-104
Identity = 157/196 (80.10%), Postives = 172/196 (87.76%), Query Frame = 0 
Query:    1 QTRDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGGSKDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKVRKV 196
            ++RDFTGAVTLLEFNRRSGED+ LEDTL+WLGYCAFHLGNY++AI+AYQE+ S+GG+ +VTL              AE AAK+GPEC LKNR+LFHVSHK+LDENKLM YHQKL+DTNEDQLSLA IHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK   V
Sbjct:   26 KSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNV 221
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: A0A836CHL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL9_9STRA)

HSP 1 Score: 254 bits (649), Expect = 8.070e-79
Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = 0 
Query:    3 RDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIG-GSKDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTD-TNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            RD+TGA+ LLEFNRRSG+D+ LED L+W+GYCAFH+G Y++A++AY+EVV+IG G  DV L              AE AA  GP+ PL+ R+L H++HK  DE KLM  HQ+L++ ++EDQLSLA IHYLRSHFQEATDIYK+LLLENRD++ALNVYVAMCYYKLDYYDVS+EILAVYLQA P SAVA+NLK
Sbjct:   40 RDYTGALALLEFNRRSGDDDNLEDMLLWIGYCAFHVGRYQRALEAYEEVVAIGAGGGDVHLYVACCHYYLQSYDQAEEAASRGPKGPLRTRLLLHIAHKQNDERKLMQQHQELSEKSSEDQLSLAAIHYLRSHFQEATDIYKKLLLENRDNIALNVYVAMCYYKLDYYDVSMEILAVYLQAQPSSAVAINLK 231
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: A0A2R5G680_9STRA (Intraflagellar transport protein 56 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G680_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.480e-74
Identity = 119/193 (61.66%), Postives = 153/193 (79.27%), Query Frame = 0 
Query:    1 QTRDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGGS-KDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            ++RD+TGA+ LLEFN+ +  D+   ++ +WLGYCA HLG+Y+KA++A+Q++  +G + K+V L              AE  A +GP C L+NR+LFH++HK  DENKLM YHQKL+DT EDQLSLA IHYLR+H+QEATDIYK+LLL++RDDLALNVYVAMCYYKLDYYDVSLEILAVYLQ+ PDS +A+NLK
Sbjct:   38 KSRDYTGAIALLEFNQHA--DDFDAESCMWLGYCAAHLGDYKKALEAFQDLQRLGDTGKEVHLYLAICMYFLQMYDEAEEEALQGPTCGLQNRLLFHIAHKQNDENKLMVYHQKLSDTKEDQLSLAAIHYLRNHYQEATDIYKQLLLQHRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQSHPDSVIAINLK 228
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BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: A0A7S0T0C7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0C7_9STRA)

HSP 1 Score: 227 bits (579), Expect = 7.220e-72
Identity = 116/191 (60.73%), Postives = 146/191 (76.44%), Query Frame = 0 
Query:    3 RDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGG-SKDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            RDFTGA+TLLEF  +  + E  +D L+W+ YCAFHLG++ +A DAY+E++S    S +V L              AEA A++GP  PLK R+LF++SH++ D+NKLM YHQ L D  EDQL+LA + YLRS +QEA DIYKRLL+E+RDDLALNVYVA+CYYKLDYYDVSLEIL+VYLQA+PDSAVA+NLK
Sbjct:   29 RDFTGALTLLEFKLKCRDGES-KDLLLWIAYCAFHLGHFRRAQDAYKELLSAHEVSDEVYLFLSACMFYQQNYEEAEATAEKGPNTPLKIRLLFNISHRLGDDNKLMKYHQLLRDKREDQLTLASVQYLRSQYQEAIDIYKRLLMESRDDLALNVYVAICYYKLDYYDVSLEILSVYLQAYPDSAVAVNLK 218
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: W4GK49_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GK49_9STRA)

HSP 1 Score: 230 bits (586), Expect = 9.310e-71
Identity = 120/194 (61.86%), Postives = 144/194 (74.23%), Query Frame = 0 
Query:    3 RDFTGAVTLLEFNRRSGEDEMLEDT---LIWLGYCAFHLGNYEKAIDAYQEVVSIGGSKDVTLXXXXXXXXXXXXXXAEAAAKEGPEC-PLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            RDFTGA T+LEFN +S +D  +ED    L+WL YC FHLG+Y++A+D Y+EV      +DV L              A   A +GP   PL+NRILFH +HK+ DE+KL+ YHQKL+   EDQLSLA IHYLR+HFQEATDIYKRLLLENRDD+ALNVYVAMCYYKLDYYDVSLEI+  YLQAFPDS +A+N+K
Sbjct:   36 RDFTGAATILEFNVKS-DDTKVEDKRMHLLWLAYCYFHLGHYQRALDTYEEVRD--PPEDVFLFRACCMYYLQLYKEATKEALKGPSSNPLQNRILFHCAHKLGDEDKLLVYHQKLSQCKEDQLSLAAIHYLRNHFQEATDIYKRLLLENRDDIALNVYVAMCYYKLDYYDVSLEIMQTYLQAFPDSVIAINVK 226
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: F7GKU0_MACMU (Intraflagellar transport protein 56 n=16 Tax=Boreoeutheria TaxID=1437010 RepID=F7GKU0_MACMU)

HSP 1 Score: 223 bits (567), Expect = 2.960e-70
Identity = 110/191 (57.59%), Postives = 140/191 (73.30%), Query Frame = 0 
Query:    3 RDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGG-SKDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            RDFTGA+TLLEF R  GE+E  EDT +W+GYCAFHLG+Y++A++ Y+        + +V +              AEAA  +  +  L+NR+LFH++HK  DE KLM++HQ L D  EDQLSLA IHY+RSH+QEA DIYKR+LL+NR+ LALNVYVA+CYYKLDYYDVS E+LAVYLQ  PDS +A+NLK
Sbjct:   37 RDFTGAITLLEFKRHVGEEE--EDTNLWIGYCAFHLGDYKRALEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKSRLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLK 225
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: UPI0004BD93B0 (tetratricopeptide repeat protein 26 isoform X1 n=3 Tax=Equus przewalskii TaxID=9798 RepID=UPI0004BD93B0)

HSP 1 Score: 223 bits (568), Expect = 3.680e-70
Identity = 111/191 (58.12%), Postives = 139/191 (72.77%), Query Frame = 0 
Query:    3 RDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGG-SKDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            RDFTGA+TLLEF R  GE E  EDT +W+GYCAFHLG+Y++A++ Y+        + +V +              AEAA  + P+  L+NR+LFH++HK  DE KLM +HQ L D  EDQLSLA IHY+RSH+QEA DIYKR+LL+NR+ LALNVYVA+CYYKLDYYDVS E+LAVYLQ  PDS +A+NLK
Sbjct:   37 RDFTGAITLLEFKRHVGEQE--EDTNLWIGYCAFHLGDYKRALEEYENATKEENCNPEVWVNLACTYFFLGMYKQAEAAGFKAPKSRLQNRLLFHLAHKFNDEKKLMNFHQNLQDITEDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLK 225
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: A0A8C6Y3M5_NAJNA (Intraflagellar transport protein 56 n=4 Tax=Sauria TaxID=32561 RepID=A0A8C6Y3M5_NAJNA)

HSP 1 Score: 223 bits (567), Expect = 7.120e-70
Identity = 111/191 (58.12%), Postives = 140/191 (73.30%), Query Frame = 0 
Query:    3 RDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGGSK-DVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            RDFTGA+ LLEF R+ GE E  ED  +W+GYCAFHLG+Y++A++ Y+++      K DV +              AE AA + P+  L+NR+LFH++HK  DE KLM +HQ L D  EDQLSLA IHY+RSH+QEA DIYKR+LL+NR+ LALNVYVA+CYYKLDYYDVS E+LAVYLQ  PDS +A+NLK
Sbjct:   36 RDFTGAIALLEFKRQVGEQE--EDADLWIGYCAFHLGDYKRALEEYEDLTKGSACKPDVWVNLACTYFFLGMYTQAEQAALKAPKSRLQNRMLFHLAHKFGDEKKLMNFHQNLQDITEDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQVPDSTIALNLK 224
[Close]
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Match: A0A2K5VLF4_MACFA (Intraflagellar transport protein 56 n=2 Tax=Cercopithecinae TaxID=9528 RepID=A0A2K5VLF4_MACFA)

HSP 1 Score: 223 bits (567), Expect = 1.000e-69
Identity = 110/191 (57.59%), Postives = 140/191 (73.30%), Query Frame = 0 
Query:    3 RDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQEVVSIGG-SKDVTLXXXXXXXXXXXXXXAEAAAKEGPECPLKNRILFHVSHKILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLK 192
            RDFTGA+TLLEF R  GE+E  EDT +W+GYCAFHLG+Y++A++ Y+        + +V +              AEAA  +  +  L+NR+LFH++HK  DE KLM++HQ L D  EDQLSLA IHY+RSH+QEA DIYKR+LL+NR+ LALNVYVA+CYYKLDYYDVS E+LAVYLQ  PDS +A+NLK
Sbjct:   37 RDFTGAITLLEFKRHVGEEE--EDTNLWIGYCAFHLGDYKRALEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKSRLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLK 225
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13479.2164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLJ2_9PHAE6.100e-10980.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBC6_ECTSI3.550e-10480.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CHL9_9STRA8.070e-7966.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R5G680_9STRA2.480e-7461.66Intraflagellar transport protein 56 n=1 Tax=Hondae... [more]
A0A7S0T0C7_9STRA7.220e-7260.73Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
W4GK49_9STRA9.310e-7161.86Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
F7GKU0_MACMU2.960e-7057.59Intraflagellar transport protein 56 n=16 Tax=Boreo... [more]
UPI0004BD93B03.680e-7058.12tetratricopeptide repeat protein 26 isoform X1 n=3... [more]
A0A8C6Y3M5_NAJNA7.120e-7058.12Intraflagellar transport protein 56 n=4 Tax=Sauria... [more]
A0A2K5VLF4_MACFA1.000e-6957.59Intraflagellar transport protein 56 n=2 Tax=Cercop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 96..196
e-value: 2.9E-7
score: 32.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..92
e-value: 2.3E-10
score: 42.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 23..179
NoneNo IPR availablePFAMPF14559TPR_19coord: 133..188
e-value: 8.5E-6
score: 26.2
NoneNo IPR availablePFAMPF12895ANAPC3coord: 22..81
e-value: 2.0E-6
score: 27.9
IPR030511Tetratricopeptide repeat protein 26PANTHERPTHR14781UNCHARACTERIZEDcoord: 2..193
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 25..58
score: 8.688
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 118..185
score: 8.284
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 25..58
score: 8.673
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 118..151
score: 5.546

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13479contigH-paniculata_contig13479:384..6827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13479.2164.1mRNA_H-paniculata_contig13479.2164.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13479 384..6827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13479.2164.1 ID=prot_H-paniculata_contig13479.2164.1|Name=mRNA_H-paniculata_contig13479.2164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
QTRDFTGAVTLLEFNRRSGEDEMLEDTLIWLGYCAFHLGNYEKAIDAYQE
VVSIGGSKDVTLFLGCCYYYMQMYDKAEAAAKEGPECPLKNRILFHVSHK
ILDENKLMAYHQKLTDTNEDQLSLAGIHYLRSHFQEATDIYKRLLLENRD
DLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKVRKVGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR030511TTC26
IPR013026TPR-contain_dom
IPR019734TPR_repeat