prot_H-paniculata_contig13414.2132.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13414.2132.1
Unique Nameprot_H-paniculata_contig13414.2132.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length351
Homology
BLAST of mRNA_H-paniculata_contig13414.2132.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.010e-5
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    8 CFHQGCPKQPSYGVEGTKKAEFCARHAENGMVDVL 42
            C H GCPKQP YGV GTKK EFC+ H + GMVDV+
Sbjct:    4 CGHAGCPKQPKYGVAGTKKREFCSGHRKAGMVDVV 38          
BLAST of mRNA_H-paniculata_contig13414.2132.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.430e-5
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    6 KRCFHQGCPKQPSYGVEGTKKAEFCARHAENGMV 39
            +RC H+ C K P+YGV GT+KAEFCA HA +GMV
Sbjct:   15 RRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMV 48          
BLAST of mRNA_H-paniculata_contig13414.2132.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.660e-5
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    6 KRCFHQGCPKQPSYGVEGTKKAEFCARHAENGMV 39
            KRC H GC K+PSYG +G+KKAE CA+HA  GMV
Sbjct:    7 KRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40          
BLAST of mRNA_H-paniculata_contig13414.2132.1 vs. uniprot
Match: D8LCI2_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 2.600e-5
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    7 RCFHQGCPKQPSYGVEGTKKAEFCARHAENGMVDV 41
            RC H GC K  SYGV+GTK+ EFC RHA+ GMVDV
Sbjct:    5 RCGHPGCGKHSSYGVKGTKEREFCGRHAKMGMVDV 39          
BLAST of mRNA_H-paniculata_contig13414.2132.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 8.760e-5
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    6 KRCFHQGCPKQPSYGVEGTKKAEFCARHAENGMVDV 41
            K C H GC  + ++GV G+KKAEFC+RHAE+GMVD+
Sbjct:    7 KTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGMVDL 42          
BLAST of mRNA_H-paniculata_contig13414.2132.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 9.810e-5
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    6 KRCFHQGCPKQPSYGVEGTKKAEFCARHAENGM 38
            +RC H GC K+PS+G +G+KK EFCA+HA  GM
Sbjct:    7 RRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13414.2132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KW71_9PHAE1.010e-568.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBM3_9PHAE1.430e-564.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUJ6_ECTSI1.660e-567.65EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LCI2_ECTSI2.600e-568.57EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2... [more]
D8LCH9_ECTSI8.760e-561.11EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB1_ECTSI9.810e-560.61EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13414contigH-paniculata_contig13414:4598..5650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13414.2132.1mRNA_H-paniculata_contig13414.2132.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13414 4410..6375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13414.2132.1 ID=prot_H-paniculata_contig13414.2132.1|Name=mRNA_H-paniculata_contig13414.2132.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp
MLRQRKRCFHQGCPKQPSYGVEGTKKAEFCARHAENGMVDVLKKKCSHQG
CSTRASSGVAGTKKAEFCARHAENGMVDVLKKKCSHQGCSTQPSYGVAGT
KKADFCARHAENGMVDVLNKRCSHQGCSTRASYGVAGMKKAEFCAQHAIN
GMVDVRNKRCSHQGCFTRASYGVAGTVKIEFCARHAENGMVDVINKRCSH
QGCSRHPSYGVAGTKKAEFCARHAENGMVNARTSNSINRGGHLKKPSSPS
QVKLEVSSEDLDGHCGCCGTVEKVRKRHSALTFPSHSGSSTSRESRSAKR
ARVSVRLSMTEQLAYGTPSAGISSLDNEANIKTEVAASRRSVPGTVLQQQ
*
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