prot_H-paniculata_contig13334.2088.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig13334.2088.1
Unique Name	prot_H-paniculata_contig13334.2088.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	92

Homology

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A6H5JAW2_9PHAE (RCK N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.260e-33
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            D+L+FLA+T AVVP C ++ ISPVLGFL  G +LGPSG SVIK++ EL+TLGELGISFLLFEQGLELSLDRLKALSKYAFGLGT QV
Sbjct:  176 DALMFLAATVAVVPACKKLNISPVLGFLATGAILGPSGISVIKNLNELDTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTAQV 262

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A835ZF36_9STRA (K(+) efflux antiporter 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF36_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.840e-29
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            D+L FLA+T A+VP+  +  +SPVLGFL AG +LGP G   IKD+ +LN LGELGI+FLLFEQGLELSLDRLKAL KYAFGLGTLQV
Sbjct:  116 DALKFLAATVAIVPIAKRFNLSPVLGFLAAGLILGPKGVGAIKDLRDLNALGELGITFLLFEQGLELSLDRLKALGKYAFGLGTLQV 202

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A835ZEK7_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK7_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.830e-29
Identity = 62/87 (71.26%), Postives = 74/87 (85.06%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            DSL+FLA+T  +VPL  ++ +SPVLGFL AG  LGP GF +I+++ +LN LGELGI+FLLFEQGLELSLDRLKAL KYAFGLGTLQV
Sbjct:   17 DSLIFLAATVFLVPLSKKLNVSPVLGFLGAGLALGPHGFKLIRELRDLNALGELGITFLLFEQGLELSLDRLKALGKYAFGLGTLQV 103

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: D8LEI4_ECTSI (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI4_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 6.020e-26
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 0

Query:   24 PVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            PVLGFL  G +LGPSG SVIKD+ EL+TLGELGISFLLFEQGLELSLDRLKALSKYAFGLGT QV
Sbjct:  409 PVLGFLATGAILGPSGISVIKDLNELDTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTAQV 473

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A7R9U8T7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8T7_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.390e-24
Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            D L+FLA+T  VVPL   + +S VLGFL AG LLGP+G  V KD+ +L +L E+GI FLLFEQGLEL+LDRL+ L+KYAFGLG LQ+
Sbjct:   76 DGLIFLAATVIVVPLTKSVKVSSVLGFLFAGFLLGPAGIGVFKDLNDLESLSEIGILFLLFEQGLELTLDRLRNLAKYAFGLGFLQM 162

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A7S1UH40_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH40_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.170e-23
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            D LVFLA+T  V+PL   + IS VLGFL  G +LGP GF + +D+ +L+ LGE+GI FLLFEQGLEL+L+RL++L+K+AFGLG LQV
Sbjct:  100 DGLVFLATTVLVIPLTKYLRISNVLGFLAMGFVLGPRGFGIFRDLQDLDVLGEIGILFLLFEQGLELTLERLRSLAKFAFGLGLLQV 186

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A7S2UWU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWU9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.470e-23
Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            D LVF+A+  AVVP+   + ISP+LGFL AG  LGP G +VI DI +L  L ++GI FLLFEQGLEL++ RLK+L+K+AFGLG LQV
Sbjct:  161 DGLVFMATAVAVVPIFTALDISPILGFLGAGLALGPVGLNVIADIHDLEELADVGILFLLFEQGLELTIPRLKSLAKFAFGLGLLQV 247

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A383WCY8_TETOB (RCK N-terminal domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WCY8_TETOB)

HSP 1 Score: 102 bits (254), Expect = 2.210e-23
Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            D L FLA+T AVVP C  + +SPVLGFL AG  L  +G  ++KD+ ++ TL ELG+ FLL+EQGLELSLDRLKALSKYAFG+G+LQV
Sbjct:  129 DFLTFLATTVAVVPTCKFLKVSPVLGFLAAGVALEQAG--MLKDLKDMETLSELGVLFLLYEQGLELSLDRLKALSKYAFGMGSLQV 213

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: M2VZM4_GALSU (Monovalent cation:H+ antiporter-2, CPA2 family isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZM4_GALSU)

HSP 1 Score: 100 bits (248), Expect = 1.460e-22
Identity = 49/91 (53.85%), Postives = 70/91 (76.92%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQVCENG 92
            D+L  LA+T A+VP+  ++ +SPVLGFL++G +LGP GF ++KD+ ++  L + G+ FLLFE GLELS+DRL+ L KYAFGLG+LQ+   G
Sbjct:   97 DTLELLAATVAIVPVFKRINLSPVLGFLLSGVILGPHGFRLVKDVEDIKHLADFGVLFLLFEMGLELSIDRLRKLRKYAFGLGSLQMLITG 187

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BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Match: A0A7S0ZLB0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLB0_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 3.130e-22
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0

Query:    2 DSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELNTLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQV 88
            D+L  L +T  V+P+  +  +SPVLGFL+AG +LGP G  ++KD+ ++  L + G+ FLLFE GLELSLDRL+ L KYAFGLGTLQV
Sbjct:  112 DTLEILIATVIVIPIFRRFALSPVLGFLLAGVVLGPHGLRIVKDVEDITELADFGVLFLLFEMGLELSLDRLRKLRKYAFGLGTLQV 198

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig13334.2088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JAW2_9PHAE	2.260e-33	78.16	RCK N-terminal domain-containing protein n=1 Tax=E...	[more]
A0A835ZF36_9STRA	1.840e-29	71.26	K(+) efflux antiporter 3 n=1 Tax=Tribonema minus T...	[more]
A0A835ZEK7_9STRA	2.830e-29	71.26	Sodium/hydrogen exchanger family-domain-containing...	[more]
D8LEI4_ECTSI	6.020e-26	86.15	Na_H_Exchanger domain-containing protein n=1 Tax=E...	[more]
A0A7R9U8T7_9STRA	3.390e-24	63.22	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S1UH40_9STRA	1.170e-23	60.92	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S2UWU9_9STRA	1.470e-23	60.92	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A383WCY8_TETOB	2.210e-23	64.37	RCK N-terminal domain-containing protein n=2 Tax=T...	[more]
M2VZM4_GALSU	1.460e-22	53.85	Monovalent cation:H+ antiporter-2, CPA2 family iso...	[more]
A0A7S0ZLB0_9RHOD	3.130e-22	56.32	Hypothetical protein n=1 Tax=Timspurckia oligopyre...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 1..90 e-value: 3.2E-19 score: 71.0
IPR006153	Cation/H+ exchanger	PFAM	PF00999	Na_H_Exchanger	coord: 5..88 e-value: 7.4E-14 score: 51.3
None	No IPR available	PANTHER	PTHR46157	FAMILY NOT NAMED	coord: 1..89
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..92
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig13334	contig	H-paniculata_contig13334:1698..1973 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig13334.2088.1	mRNA_H-paniculata_contig13334.2088.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig13334 1698..1973 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig13334.2088.1 ID=prot_H-paniculata_contig13334.2088.1|Name=mRNA_H-paniculata_contig13334.2088.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MDSLVFLASTCAVVPLCVQMGISPVLGFLVAGGLLGPSGFSVIKDIGELN
TLGELGISFLLFEQGLELSLDRLKALSKYAFGLGTLQVCENG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038770	Na+/solute_symporter_sf
IPR006153	Cation/H_exchanger