prot_H-paniculata_contig13329.2083.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.970e-42 Identity = 91/221 (41.18%), Postives = 131/221 (59.28%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRD-VPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGR-REKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKV-----KISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAVHEAAVV 214 M VD AYL + ++++++VK PP + + V RLRKSLYGLKQSGR W+ +D + G G + S+ D CLYV GE L++ +YVDDL+IAG R+ VD+F IS+ + M DL L ++G+ ++RN + ISQ +YI +L ++ +C+ V TP+EG + + +PDR EY +VGSL YA TRPDIA AV V+ Sbjct: 84 MDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEM-LVIVLYVDDLIIAGNSRDMVDDFKQAISKEISMKDLKELDWILGMAIKRNREKRFMEISQTAYIDMMLAKFKMADCKPVLTPMEGILTKMNGEGDKPDR-------EYMKLVGSLLYAALVTRPDIAFAVQSVLVM 296
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU) HSP 1 Score: 160 bits (404), Expect = 1.130e-40 Identity = 92/218 (42.20%), Postives = 128/218 (58.72%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRDVPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGR-REKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVKISEPDRGRS---------GNSTEYRGMVGSLTYALTGTRPDIAHAV 208 M V AAYLN + +EL++ PP + + RL++SLYGLKQ+GR WN TLD L G+G NR +++CLYV DD G+ LV VYVDDL++A R +DE ++ + +M DLG S ++GI +RR+ P I +SQ YI VL RY ++C+ TP+ VK S D + G S Y ++GS+ YA+ GTRPDIA+ V Sbjct: 1093 MDVSAAYLNGELDEELYLMPP---DGVAIEPGHCWRLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLV 1306
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 154 bits (389), Expect = 5.590e-39 Identity = 87/210 (41.43%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRDV-PFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGR-REKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVKISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAV 208 M VD AYL + +++++++K PP + + + V RLRKSLYGLKQSGR W+ +D + G GL+ S D CLYV GE L++ +YVDDL+I R D+F +IS+ M DL L ++G+ ++RN N T+ ISQ YI +L ++ +C+ V TP+EG + + + N EY +VGSL YA TRPDIA AV Sbjct: 304 MDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDVKPDN--EYMKLVGSLLYAALVTRPDIAFAV 510
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 150 bits (380), Expect = 6.670e-39 Identity = 86/210 (40.95%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSF-SRDVPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGR-REKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVKISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAV 208 M V+ AYL + ++++++VK PP + + S V RLRKSLYGLKQSGR W+ +D + G G + S+ D CLYV GE L++ +YVDDL+I RE V +F H IS+ M DL L ++G+ ++R+ + ISQ +YI +L ++ +C+ V TP+EG + + + N EY +VGSL YA TRPDIA AV Sbjct: 84 MDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDN--EYMKLVGSLLYAALVTRPDIAFAV 290
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT) HSP 1 Score: 148 bits (373), Expect = 8.670e-38 Identity = 83/211 (39.34%), Postives = 127/211 (60.19%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRD-VPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGRR-EKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVK-ISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAV 208 M V A+L+AP+ E+F++ P F S + V V RL+KSLYGLKQSGR WN LD++L+ G R+ D C+Y GE ++V ++VDDL+IA +K+ +F N+ + RM DLG +S +GI ++ NG I ++Q YI ++L R+ +C+ TP E + + +S+ ++ + YR +VGSL Y +T TRPDI+ V Sbjct: 254 MDVKTAFLHAPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFVRNPVDHCVYQK--QTGEDIIIVVIWVDDLIIASSNTDKIRQFKENMKSKFRMKDLGEISYFLGISFKQG--NGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFEGMSDSEQV---DPRRYREIVGSLIYLMTCTRPDISWVV 457
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA) HSP 1 Score: 151 bits (382), Expect = 8.840e-38 Identity = 87/210 (41.43%), Postives = 124/210 (59.05%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRD-VPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGR-REKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVKISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAV 208 M V+ AYL + ++++++VK P + + + V RLRKSLYGLKQSGR W+ +D + G G + S+ D CLYV GE L++ +YVDDL+I RE VD+F IS+ M DL L ++G+ ++RN + ISQ +YI VL ++ +CR V TP+EG + + + N EY +VGSL YA TRPDIA AV Sbjct: 313 MDVETAYLQSDLEEKVYVKQPIGYEQYGLNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGTLTKMDGKDAKPDN--EYMKLVGSLLYAALVTRPDIAFAV 519
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 150 bits (379), Expect = 2.380e-37 Identity = 82/210 (39.05%), Postives = 126/210 (60.00%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRDVPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGRRE-KVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVE-GKVKISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAV 208 + + AYLN+ + +E++++ P F S V +L+K++YGLKQSGR WNNTLD+ L +G RS ++CLYV G + +AVYVDDL+I E ++ IS + M+D GSLS +G+E++R+ G +++ Q +YI +LK Y + CR V TP++ G + + D N T+Y+ ++GSL Y +RPDI HAV Sbjct: 928 IDISNAYLNSSLDEEVYMRQPQNFISTEHPNK-VLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAV 1134
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 147 bits (371), Expect = 9.020e-37 Identity = 82/211 (38.86%), Postives = 126/211 (59.72%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRD-VPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGRR-EKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVK-ISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAV 208 M V A+L+ P+ E+F++ P F S + V V RL+KSLYGLKQSGR WN LD++L+ G R+ D C+Y GE ++V ++VDDL+IA +K+ +F N+ + RM DLG +S +GI ++ NG I ++Q YI ++L R+ +C+ TP E + + +S+ ++ + YR +VGSL Y +T TRPDI+ V Sbjct: 279 MDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVYQK--QTGEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFKQG--NGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFEGMSDSEQV---DPRRYREIVGSLIYLMTCTRPDISWVV 482
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.010e-36 Identity = 85/210 (40.48%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSF-SRDVPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGR-REKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVKISEPDRGRSGNSTEYRGMVGSLTYALTGTRPDIAHAV 208 M V+ AYL + ++++++VK P + + S V RLRKSLYGLKQSGR W+ +D + G G + S+ D CLYV GE L++ +YVDDL+I RE V++F H IS+ M DL L ++G+ ++R+ + ISQ +YI +L ++ +C+ V TP+EG + + + N EY +VGSL YA TRPDIA AV Sbjct: 524 MDVETAYLQSDLEEKVYVKQPIGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVNKFKHAISREFSMKDLKELDWILGMAIKRDREKRVMEISQTAYIDMMLAKFGMADCKPVLTPMEGTLTKMDGKDVKPDN--EYMKLVGSLLYAALVTRPDIAFAV 730
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA) HSP 1 Score: 148 bits (374), Expect = 1.110e-36 Identity = 85/212 (40.09%), Postives = 124/212 (58.49%), Query Frame = 0 Query: 1 MGVDAAYLNAPVKQELFVKPPPEFSSFSRDVPFVRRLRKSLYGLKQSGRKWNNTLDDFLVGIGLNRSTTDSCLYVSCDDGGETNLLVAVYVDDLVIAGRR-EKVDEFNHNISQRLRMNDLGSLSRVMGIEVRRNCPNGTITISQGSYICEVLKRYCFEECRGVPTPVEGKVKISEPDRGRSGNSTE---YRGMVGSLTYALTGTRPDIAHAV 208 M V A+L+ + QELF++ P F +D V L+KSLYGLKQS R WN + F+ G RS DSC+YV +GG LL+ YVDD++IA + ++D +S M D+G+ SR++GI+++R+ G + +SQ SY+ +V+KR+ E + V TP+ G K+S TE Y VGS+ YA+ GTRPDIA+A+ Sbjct: 950 MDVKTAFLHGDLDQELFMEQPEGFE-VDKDKDQVCLLKKSLYGLKQSPRLWNKKFNQFITGEKFIRSHQDSCVYVKKVEGGYVYLLL--YVDDMLIAAKEMAEIDRLKSALSSEFEMKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSAVKEVSECIDTEKYPYSSAVGSVMYAMIGTRPDIAYAI 1158 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13329.2083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig13329.2083.1 ID=prot_H-paniculata_contig13329.2083.1|Name=mRNA_H-paniculata_contig13329.2083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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