prot_H-paniculata_contig128.1759.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig128.1759.1
Unique Nameprot_H-paniculata_contig128.1759.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length229
Homology
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: D7FTS3_ECTSI (CAB/ELIP/HLIP superfamily of protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS3_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 4.190e-114
Identity = 175/229 (76.42%), Postives = 192/229 (83.84%), Query Frame = 0
Query:    1 MKAVLAICAATVASVQAFVPPTTLVGAFTPSAALSTSRVSSTGPRMAVGA-GVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLLL 228
            MKAV A+CAA VA  QAFVP TT       ++  S S  ++T PRMA G+  VF++AQA+FA EFPEYSKYGWGPTAKAERWNGRHAMFGWAAII TGYCQAHNLIP+AD  LD KVWGTLAYT GTE+IT ERA+I+ GH+HALAVSVCATVAPLSFQDKLFLD D  EKD PAPGLIPSFVPGLTPEAEIFNGRMAMMGLV+T+T ALTTG  FLEVVN GLGGLL+
Sbjct:    1 MKAVFALCAAMVAGAQAFVPTTTAFSGARVASPASASAATTT-PRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDADVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A6U4CWQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CWQ9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 2.470e-72
Identity = 119/204 (58.33%), Postives = 145/204 (71.08%), Query Frame = 0
Query:   25 VGAFTPSAALSTSRVSSTGPRMAVGAGVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLLL 228
            VG   P  AL   R ++   R  V   VF+ A  DF K+FPE+ + GWGPT KAERWNGRHAMFGW AI+ TGY QAH LIP+ D+ LD K WGTLA   G  +IT  RAVIL GH+HAL +SVCAT+APLSFQDKLFL+  E E D+PA GLIP+   GLT  AE++NGR+AM+GL++    ++ +GTP L VV+ GLGGLLL
Sbjct:   36 VGFMAPRPALQ--RGAAVSARRGVQMSVFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 235          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A6U4CP98_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CP98_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.620e-71
Identity = 111/177 (62.71%), Postives = 135/177 (76.27%), Query Frame = 0
Query:   52 VFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLLL 228
            VF+ A  DF K+FPE+ + GWGPT KAERWNGRHAMFGW AI+ TGY QAH LIP+ D+ LD K WGTLA   G  +IT  RAVIL GH+HAL +SVCAT+APLSFQDKLFL+  E E D+PA GLIP+   GLT  AE++NGR+AM+GL++    ++ +GTP L VV+ GLGGLLL
Sbjct:  113 VFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 287          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A7S2MHN0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHN0_9STRA)

HSP 1 Score: 213 bits (541), Expect = 3.530e-66
Identity = 105/176 (59.66%), Postives = 130/176 (73.86%), Query Frame = 0
Query:   52 VFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLL 227
            VF  A  +FA ++P  +KYGWGP+ KAERWNGRHAMFGW AI+ TGYCQAH+LIP+AD++LD K WGTLA   G  +I+ ERA+IL  H+HAL VSVCAT+AP+   D L L+P   E D+PA G+ P F  GLT  AE++NGRMAMMGL+  S+ +L TGT FL  V+  LGGLL
Sbjct:   48 VFTDATTEFANDYPMMAKYGWGPSTKAERWNGRHAMFGWFAIVCTGYCQAHHLIPDADKLLDLKEWGTLATISGKATISNERAIILIAHVHALMVSVCATMAPM--MDTLLLEP--GEADEPAAGVFPPFETGLTSAAELWNGRMAMMGLITASSYSLMTGTSFLNTVDLWLGGLL 219          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A7S2W341_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W341_9STRA)

HSP 1 Score: 204 bits (520), Expect = 5.690e-63
Identity = 100/185 (54.05%), Postives = 132/185 (71.35%), Query Frame = 0
Query:   44 PRMAVGAGVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLLL 228
            P  A  +GVF++A A F +++PE+S  GWGP+ KAERWNGRHAMFGW  II TGY QAH LIP  D++LD K WGTLA   GT++I+ ERA+IL  ++HA  V + A  APLS+ D L L+  + E D+   G+ P F  G+T  AE++NGRMAMMG+V T++ +L TGTPF++ VN  LGGLL+
Sbjct:   40 PLEAKTSGVFDNAVAKFKEDYPEFSAAGWGPSTKAERWNGRHAMFGWFFIICTGYAQAHGLIPEGDKLLDLKEWGTLATISGTKTISNERAIILIANVHAFMVGILAAFAPLSYMDTLLLE--DGEADEEPAGVFPPFDTGITSAAELWNGRMAMMGIVTTTSYSLLTGTPFMQTVNLWLGGLLI 222          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A835Z6M5_9STRA (CAB/ELIP/HLIP superfamily of protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M5_9STRA)

HSP 1 Score: 199 bits (507), Expect = 4.650e-61
Identity = 111/224 (49.55%), Postives = 151/224 (67.41%), Query Frame = 0
Query:    4 VLAICAATVASVQAFVPPTTLVGAFTPSAALSTSRVSSTGPRMAVGAGVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLL 227
            V A+ A  +ASV AF+P T    +F   A  +  + S++  +M+V    F  A   F+K++P++ K GWGPT KAERWNGRHAMFGW  I+ TGY +AH LIP+ +  L+ K WGTL+   G ++I+ ERAV+L  ++HAL +S+CA  APLSFQD L +   + +KD+PA GLIP+ VPGLT EAE+ NGR+AM+GLV+    +L TGTPFL  V+  LG  L
Sbjct:    3 VFALFALLLASVSAFMPATP-ASSFVAKAGAAV-KPSASSMQMSV----FTDATEAFSKDYPDFYKAGWGPTTKAERWNGRHAMFGWVLIVATGYAKAHGLIPDPEVALNLKEWGTLSILAGPQTISNERAVVLIANVHALFMSLCAAFAPLSFQDPLLIP--KGQKDEPAAGLIPAIVPGLTKEAELLNGRLAMLGLVLVMGHSLATGTPFLNSVDLFLGNRL 218          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A7S3JY58_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY58_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.120e-60
Identity = 99/177 (55.93%), Postives = 124/177 (70.06%), Query Frame = 0
Query:   53 FESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAY-TQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLLL 228
            F  A   F  ++P ++ YGWG + KAERWNGRHAMFGW  II TGY Q+H LIP+AD+ LD  VWGTLA  T    +IT ERA+IL  ++HAL VS+CA  AP   QDKL L+P E ++D PA G+IP F PGL P+AE+ NGR+AM+G+   S  +L  G PF++VVN  LGGLLL
Sbjct:   39 FTEATDKFKSDYPSFAAYGWGVSPKAERWNGRHAMFGWFFIICTGYAQSHGLIPDADKTLDLSVWGTLAQITPRVSTITNERAIILVANIHALMVSLCAAFAPFPTQDKLLLEPGEADED-PA-GIIPKFTPGLNPDAEMINGRLAMLGITTVSAYSLIYGVPFMDVVNSMLGGLLL 213          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A7S1BP97_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP97_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.010e-59
Identity = 113/223 (50.67%), Postives = 140/223 (62.78%), Query Frame = 0
Query:    5 LAICAATVASVQAFVPPTTLVGAFTPSAALSTSRVSSTGPRMAVGAGVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLL 227
            LAI +  +A V AF P  +   AF+P A    S  +    R  V   VFE A  ++  E+P+++K+GWGP+ KAERWNGRHAMFGW  I+ + Y   HNLIPNAD  LD K WGTLA   G  +IT ERAVIL  ++HAL VS  A +AP SF D+L L   E E D+   GL+P  V GLTPEAEI NGRMAMMGL+     +     P ++VVN+ LGGLL
Sbjct:   34 LAIVSCLLAGVSAFSPSGSRF-AFSPKAVTELSAFND--GRSLVSDAVFEDAMGEWKAEYPKFAKFGWGPSTKAERWNGRHAMFGWFVIVASAYAHGHNLIPNADMALDLKQWGTLATISGKSTITNERAVILIANVHALFVSFLAAMAPSSFADQLLLK--EGEVDEEPYGLVPPLVTGLTPEAEIMNGRMAMMGLIALVGTSAINQMPMVDVVNEWLGGLL 251          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A8J6CBU4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBU4_DIALT)

HSP 1 Score: 196 bits (498), Expect = 1.210e-59
Identity = 104/184 (56.52%), Postives = 125/184 (67.93%), Query Frame = 0
Query:   50 AGVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVP-----GLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLLL 228
            A VFE A A+F K+FPE+SK G+GPT KAERWNGRHAMFGW  I+ TGY Q+HNLIPN D  LD   WG LA      SIT  RA+IL  H+HAL VS+ ++++P  FQD L L+    E+D+ A GL   FVP     GLT  AE+ NGR+AM+GL+     +L TG P LEVVN GLGGLLL
Sbjct:   43 ASVFEGAMANFEKDFPEFSKRGFGPTTKAERWNGRHAMFGWVVILATGYAQSHNLIPNFDAPLDLSAWGPLARQGDYSSITNGRAIILIAHVHALFVSLASSLSPFGFQDSLTLNMKAAERDEAAYGL---FVPIPGQAGLTAAAEMMNGRLAMLGLIAAVGASLATGQPLLEVVNTGLGGLLL 223          
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Match: A0A7S3ZNW5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNW5_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.640e-58
Identity = 98/182 (53.85%), Postives = 127/182 (69.78%), Query Frame = 0
Query:   51 GVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQAHNLIPNADQMLDTKVWGTLAYTQGTE----SITQERAVILAGHMHALAVSVCATVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVITSTIALTTGTPFLEVVNQGLGGLLL 228
            G  E     F ++FPE++ YGWG + KAERWNGRHAMFGWA II TGYC+AH LIP+ +++LD K WGTLA   G +    +IT ERA IL  ++H L VS+CA   PL FQD L L+P E +++ PA GL+P+F  GLTP AE++NGR+AM+GL+I S  ++    PFL  V+  LGGLLL
Sbjct:   42 GFMEQGTEMFQEQFPEFNSYGWGVSVKAERWNGRHAMFGWAFIIATGYCKAHGLIPDPEKLLDFKQWGTLAIISGGKGGGITITNERACILVANIHFLVVSLCAAFCPLPFQDTLLLEPGEPDEE-PA-GLVPAFDTGLTPAAELWNGRLAMLGLIIFSAYSMIYQIPFLNAVDNALGGLLL 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig128.1759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTS3_ECTSI4.190e-11476.42CAB/ELIP/HLIP superfamily of protein n=2 Tax=Ectoc... [more]
A0A6U4CWQ9_9STRA2.470e-7258.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4CP98_9STRA3.620e-7162.71Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2MHN0_9STRA3.530e-6659.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W341_9STRA5.690e-6354.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z6M5_9STRA4.650e-6149.55CAB/ELIP/HLIP superfamily of protein n=1 Tax=Tribo... [more]
A0A7S3JY58_9STRA3.120e-6055.93Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1BP97_9STRA1.010e-5950.67Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J6CBU4_DIALT1.210e-5956.52Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3ZNW5_9STRA2.640e-5853.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 58..223
e-value: 2.8E-7
score: 32.8
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 76..203
e-value: 2.5E-7
score: 31.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..228
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.67
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 69..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig128contigH-paniculata_contig128:36290..38385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig128.1759.1mRNA_H-paniculata_contig128.1759.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig128 34620..38492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig128.1759.1 ID=prot_H-paniculata_contig128.1759.1|Name=mRNA_H-paniculata_contig128.1759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
MKAVLAICAATVASVQAFVPPTTLVGAFTPSAALSTSRVSSTGPRMAVGA
GVFESAQADFAKEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIILTGYCQ
AHNLIPNADQMLDTKVWGTLAYTQGTESITQERAVILAGHMHALAVSVCA
TVAPLSFQDKLFLDPDENEKDDPAPGLIPSFVPGLTPEAEIFNGRMAMMG
LVITSTIALTTGTPFLEVVNQGLGGLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind