prot_H-paniculata_contig1275.1729.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1275.1729.1
Unique Nameprot_H-paniculata_contig1275.1729.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig1275.1729.1 vs. uniprot
Match: D7G4U8_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4U8_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 9.390e-25
Identity = 88/247 (35.63%), Postives = 116/247 (46.96%), Query Frame = 0
Query:    1 MWSWGVLQRTGTEGWFPHNYVGTTFKPLPGIHEMAAKIRERREKQEAALALKGVATAEIQGG----AASDAVTTHVPLP-------------STENQEPGDVSVSALGSTTTQVEHTTKSPGSVSGERTAISGKRSEGVGGVGEVGGVGAAANPALAHGKAPPAQEMMSNVKSAGGLK-AVSAELPTLPPFFSSGKACNVDATASIPTQQATDQRQTSELLETAQIQGVGNAGESVAKDGGCKCAVM 229
            MWSWGVL R G EGWFPHNYVGTTFKPLPGIHEMAAK++ R EK  AA A +     + +      ++ DA   H                   ++   GD+      S  T        P + +G     +    + V   G V GV  A       G      E+ +  K+    K A+ +  P+LPPF          ATA +PT  A  +  ++E+++T Q+ GVG AGES A   GCKC VM
Sbjct:  142 MWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAAKLKARNEKAAAAKAREDEPNPQSENADPTASSLDATADHTAXXXXXXXXXXQDATSDVKSAPGGDIVADGATSNETHPIPNEHLPDTSTGXXXXTAAVSEDVV--PGPVDGV--AREDEEVGGGVGNDVELKTTPKTENADKPALVSATPSLPPFLKGPTNTTGAATAVLPTSGAVREADSAEVVDTTQVHGVGFAGESPATRTGCKCTVM 384          
BLAST of mRNA_H-paniculata_contig1275.1729.1 vs. uniprot
Match: A0A836C9Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.420e-11
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MWSWGVLQRTGTEGWFPHNYVGTTFKPLPGIHEMAAKIRERREKQEA 47
            +WSWG L RTG EG+FPHNYV  TFKPLPG+HE+  K+  +R +QEA
Sbjct:   48 LWSWGQLVRTGEEGYFPHNYVQATFKPLPGMHELKMKMAIKRARQEA 94          
BLAST of mRNA_H-paniculata_contig1275.1729.1 vs. uniprot
Match: D7FJI7_ECTSI (Pleckstrin homology (PH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI7_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 7.380e-10
Identity = 25/47 (53.19%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MWSWGVLQRTGTEGWFPHNYVGTTFKPLPGIHEMAAKIRERREKQEA 47
            +WSWG L+++G EGWFPHNYV  +F+PLPG+HE+  +I  ++ ++EA
Sbjct:   78 LWSWGKLEKSGEEGWFPHNYVQASFQPLPGMHELQQRILIKKAREEA 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1275.1729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4U8_ECTSI9.390e-2535.63SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836C9Y6_9STRA5.420e-1163.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FJI7_ECTSI7.380e-1053.19Pleckstrin homology (PH) domain-containing protein... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1275contigH-paniculata_contig1275:2397..26443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1275.1729.1mRNA_H-paniculata_contig1275.1729.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1275 1051..26492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1275.1729.1 ID=prot_H-paniculata_contig1275.1729.1|Name=mRNA_H-paniculata_contig1275.1729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MWSWGVLQRTGTEGWFPHNYVGTTFKPLPGIHEMAAKIRERREKQEAALA
LKGVATAEIQGGAASDAVTTHVPLPSTENQEPGDVSVSALGSTTTQVEHT
TKSPGSVSGERTAISGKRSEGVGGVGEVGGVGAAANPALAHGKAPPAQEM
MSNVKSAGGLKAVSAELPTLPPFFSSGKACNVDATASIPTQQATDQRQTS
ELLETAQIQGVGNAGESVAKDGGCKCAVM*
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