prot_H-paniculata_contig12723.1714.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12723.1714.1
Unique Nameprot_H-paniculata_contig12723.1714.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length50
Homology
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BLAST of mRNA_H-paniculata_contig12723.1714.1 vs. uniprot
Match: D7FJZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ5_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 7.000e-11
Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 0 
Query:    9 GSSEVLDPARVAMSMLKEEDHVWTIETCMETINLLRARNKCV 50
            GS    D AR AM +LKEEDHVWTIETCMETINLLRARN  +
Sbjct:   31 GSPTSFDAARAAMCLLKEEDHVWTIETCMETINLLRARNNAL 72
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12723.1714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJZ5_ECTSI7.000e-1173.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12723contigH-paniculata_contig12723:6962..7111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12723.1714.1mRNA_H-paniculata_contig12723.1714.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12723 6962..7111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12723.1714.1 ID=prot_H-paniculata_contig12723.1714.1|Name=mRNA_H-paniculata_contig12723.1714.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp
MSSSGEKEGSSEVLDPARVAMSMLKEEDHVWTIETCMETINLLRARNKCV
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