prot_H-paniculata_contig12716.1705.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12716.1705.1
Unique Nameprot_H-paniculata_contig12716.1705.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1074
Homology
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BLAST of mRNA_H-paniculata_contig12716.1705.1 vs. uniprot
Match: A0A6H5JNI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI7_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 2.200e-71
Identity = 166/406 (40.89%), Postives = 228/406 (56.16%), Query Frame = 0 
Query:  371 IASDLLKTGTPRRRRLVRLDNGSVVVLPTNIYRQAAGVKLDLSLGGLRLNGERPTMKNRAFNFGVMPGINRENILALRAFRNEIIPLDRN---NTIHYLAAVEALRRYDEEHLKPPDGS---ESSSYEGSGGWIPDSQEVLFTVVGSRAELLVPASELRAVDFTEACKTVLEALKVNPDVLAGQLEPAPDN---------------PTTTAITAKDEDV-------------------GIESHTRSGGV----------VASAESGGFQEPKRRGRKKKAVV----------------------------AEDGTAYDLPKYVQHEKMMKNNRSTLKLKMPLAGYLVNGEEISVADLVVAGGLDVTPKNILALRGARDAVMMNFAGPPAVQRVVAAEIFHYWYKRR 698
            IA+       P+R+RL+RL++G +VV+PTNIYRQA GVKLD++LGG R++ E+ T+KNRA+NFGV+PG  REN+LALRAFR+ ++P DR+   ++IH + A EA+ RYDEEH+KPP+GS   E SS+ G+G WIPDS+ +  T  GS  EL V A +LRAV+    CK  LEALK +P VL G+LEPAP +               P  T  +   E +                   G  S   +GG            A+  + GF +    GR +   +                             E    YDLP +VQ  +  K  R +L+LK+PL G++V+GE +  ++LVVA GLD+T KN+LALR   DAV+ NFA P  V+RV+A E+F  W +RR
Sbjct:   91 IAATTKPVAAPKRKRLMRLESGELVVIPTNIYRQAGGVKLDITLGGFRIDNEKCTLKNRAYNFGVLPGFTRENLLALRAFRDTLLPTDRSKMPSSIHTIIAAEAMIRYDEEHVKPPEGSSFAEESSHYGAGRWIPDSRVIHMTYTGSDMELRVKAGDLRAVNRPLQCKMALEALKSDPKVLEGKLEPAPPSVDVYGSGGAETVGPEPGATGFSRSPESLQPASSDPRSGGRRVAGGGEGXXSRAPAGGANAEFSLLFGGAAAFANDGFVDDHDNGRPRTKDLDSTSMHRXXXXXXXXXXXXXXTEEGGEGGEGAVEYDLPLHVQIVEG-KQCRPSLRLKVPLTGFMVDGEIVPSSELVVAHGLDITRKNLLALRACCDAVLANFAAPDLVKRVIAGEVFRVWTRRR 495
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12716.1705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNI7_9PHAE2.200e-7140.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12716contigH-paniculata_contig12716:702..4930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12716.1705.1mRNA_H-paniculata_contig12716.1705.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12716 702..4930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12716.1705.1 ID=prot_H-paniculata_contig12716.1705.1|Name=mRNA_H-paniculata_contig12716.1705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1074bp
QTRNTANGRSAEQHWLTHIIVPFSLVHGYQDMTEPGGSNKSAKAHSENSP
NITNSKQSPPGYNSSNVPRHSSLNSDTTDTDDDAPKDNGLVKSFTTSAPG
PNSTSAKTMAIESRMEEDVGAPIVSRTRGSAGTLQDVSPSPTTHGWEGTA
NTNTAARERPPHEEEGSVTLVTGYEDSSTVVVAGRAAGSSNGGHLAVSST
VGVGTGSAVGVSQQHFMGVGRPICSNPQQHHNDNEGAPPTMSSGLSTEDG
PPPSGQHDATATSSGSGVASVSVEGGRLGQGYATPSLVNPSHEGVSQSSN
NIFPVPATPTRSTSHQQPQAPRAAVAQGEHLSLEVTSSHLQAGVSAGSTA
TGGHGQQLVPKFIRSGGNEDIASDLLKTGTPRRRRLVRLDNGSVVVLPTN
IYRQAAGVKLDLSLGGLRLNGERPTMKNRAFNFGVMPGINRENILALRAF
RNEIIPLDRNNTIHYLAAVEALRRYDEEHLKPPDGSESSSYEGSGGWIPD
SQEVLFTVVGSRAELLVPASELRAVDFTEACKTVLEALKVNPDVLAGQLE
PAPDNPTTTAITAKDEDVGIESHTRSGGVVASAESGGFQEPKRRGRKKKA
VVAEDGTAYDLPKYVQHEKMMKNNRSTLKLKMPLAGYLVNGEEISVADLV
VAGGLDVTPKNILALRGARDAVMMNFAGPPAVQRVVAAEIFHYWYKRRCS
TASTSTPTSASPIPKDADGMEAGASATLDTPSGDAIMAEDGESESESAAD
GFAQGGEEGVSPRAPLSADAKARSDTEEDVGEIAGAVKGRLSKMPVAATA
WPEEEPSTSSPQDGSTTAMDVDADADADADGDAGTSNRAAEGAPPAADSN
AARSSAASISPTHSGEASPSPEAGGTSSHALVTVEARSAVGAFAGLNNDD
ILIISGPPTDQGGTRLEVHMAVRDLIAARAQRAIVFRHLVEAMMGDPVVQ
SGQLEIVAHRSTANDMPSAAPRGGGGEMMPYLPHVQSQQSQAAFPMTHNT
TAIATPLDGGASSSNGYGERIAGVGGNLQRGCDEMDAASLLAAKVQQPPL
DRPGYADWSGSRAVGTRGGSGGGG
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