prot_H-paniculata_contig12508.1574.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12508.1574.1
Unique Nameprot_H-paniculata_contig12508.1574.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
BLAST of mRNA_H-paniculata_contig12508.1574.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.060e-31
Identity = 68/183 (37.16%), Postives = 104/183 (56.83%), Query Frame = 0
Query:    2 GNSVILSDNDAVWFKDPIKELDQ---IEGDVIGSRAPWPAKLGDPIFGVTLCMGFIFFREGAR--GMPEFQQLLEDSMVEKPDDQISVNKAVAGLKPVYNYNITTSDMRFKESAAPGRCVLTALPGT----FRVTLLPHSTYTRFCQDVPITDDTVVGHCHNWGSPERRIQYMKQAGTWILDK 175
            G+ V++SD DA+W  DP+K+      +   ++ SR  +P ++G  ++G T+CMGFI FR  A    M EF  ++   ++E+ DDQI+VN A   L  V+N     SDMR+ ES   G   + +L       F VTLLPHS YTR C   P+++ TVV HC +  +P+ +  +M +   W +D+
Sbjct:   67 GHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGH-VWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQE--DSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDE 246          
BLAST of mRNA_H-paniculata_contig12508.1574.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 3.530e-14
Identity = 62/193 (32.12%), Postives = 86/193 (44.56%), Query Frame = 0
Query:   16 KDPIKELDQIEGDVIGSRAPWPAKLGDPIFGVTLCMGFIFFR-EGARGMPEFQQLLEDSMVEKPDDQISVNKAVAGLKPVYNYN------------------ITTSDMRFKESAAP------GRCVLTA-----LPGTFRVTLLPHSTYTRFCQDVPITDDT-VVGHCHNWGSPER----RIQYMKQAGTWIL 173
            KD     D   GD++ SR  WP       +G TLCMGFI FR     GM  F  ++ D +V+  DDQISVN+A   L  V++ N                  + TS+               G  V+       +   FRVTLLPHS YTR C    +++ T VV HC+    P++    +  +MK+A  W +
Sbjct:  151 KDLFSRGDGGRGDIVASRGSWPNDQWKE-WGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCY---FPQKEAGVKTSWMKKANLWSV 339          
BLAST of mRNA_H-paniculata_contig12508.1574.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 2.220e-9
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    2 GNSVILSDNDAVWFKDPIKELDQ---IEGDVIGSRAPWPAKLGDPIFGVTLCMGFIFFREGAR--GMPEFQQLLEDSMVEKPDDQISV 84
            G+ VI+SD DA+W  DP+K+      I+  ++ SR   P ++G  ++G T+CMGFI FR  A    M +F  ++   + E  DDQI+V
Sbjct:   62 GHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGK-VWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of mRNA_H-paniculata_contig12508.1574.1 vs. uniprot
Match: UPI001FF119D2 (glycosyltransferase family 77 protein n=1 Tax=Starkeya koreensis TaxID=266121 RepID=UPI001FF119D2)

HSP 1 Score: 57.0 bits (136), Expect = 1.640e-6
Identity = 49/176 (27.84%), Postives = 81/176 (46.02%), Query Frame = 0
Query:    2 GNSVILSDNDAVWFKDPIKELDQIEGDVIGSRAPWPAKLGDPIFGVTLCMGFIFFREGARGMPEFQQLLEDSMVE-KPDDQISVNKAVAG-------LKPVYNYNITTSDMRFKESAAPGRCVLTALPGTFRVTLLPHSTYTRFCQDVPITDDTVVGHCHNWGSPERRIQYMKQAG 169
            G SV+ SD DA+W +DP+ ++ + E D+      +P +     +G ++CMGF F R G   +     LLE S+      DQ  +N ++          +P  N+     +  +  S A GRC  T L    R++ LPHS Y R        D   V H ++   P  +++ +++ G
Sbjct:  112 GRSVLYSDVDAIWLRDPVDDILRGEADMAFQPGSFPQE-AKTAWGFSVCMGFFFMRPGEAVI----DLLETSIRRFDGSDQRGLNLSLLEGFDLRWESRPA-NWEHGRIEDGWTRSVA-GRCGRTGL----RLSALPHSFYQRHGTRPETMDHAYVCHPNSPKDPAAKLRILRELG 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12508.1574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G4E2_ECTSI1.060e-3137.16Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LK17_ECTSI3.530e-1432.12Nucleotid_trans domain-containing protein n=1 Tax=... [more]
D7FQM0_ECTSI2.220e-938.64Nucleotid_trans domain-containing protein n=1 Tax=... [more]
UPI001FF119D21.640e-627.84glycosyltransferase family 77 protein n=1 Tax=Star... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005069Nucleotide-diphospho-sugar transferasePFAMPF03407Nucleotid_transcoord: 1..143
e-value: 5.2E-7
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12508contigH-paniculata_contig12508:429..4331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12508.1574.1mRNA_H-paniculata_contig12508.1574.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12508 406..7505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12508.1574.1 ID=prot_H-paniculata_contig12508.1574.1|Name=mRNA_H-paniculata_contig12508.1574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MGNSVILSDNDAVWFKDPIKELDQIEGDVIGSRAPWPAKLGDPIFGVTLC
MGFIFFREGARGMPEFQQLLEDSMVEKPDDQISVNKAVAGLKPVYNYNIT
TSDMRFKESAAPGRCVLTALPGTFRVTLLPHSTYTRFCQDVPITDDTVVG
HCHNWGSPERRIQYMKQAGTWILDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005069Nucl-diP-sugar_transferase