prot_H-paniculata_contig12332.1473.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12332.1473.1
Unique Nameprot_H-paniculata_contig12332.1473.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length261
Homology
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: D7G490_ECTSI (Dhm exonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G490_ECTSI)

HSP 1 Score: 475 bits (1222), Expect = 4.400e-162
Identity = 226/251 (90.04%), Postives = 242/251 (96.41%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREARVTEPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSRRKKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRSSKEAE  MAEMV R+GKLP  + RFDSNCITPGTDFMFKL+KAF+AWI+YKMDTDPFWQQNARV+FSGPDVPGEGEHKVMDYIREAR TEPDWRDDLRHCLYGLDADLIMLSLVTHEK+FSLLREK++VRHSRRKKPKDPITYTRNDFEL+EVSLLREMLRLQFQ++A DP+LPFKFELERVIDDFVFMCILVGNDFLPN+PHLDI+DGALNHMMNMYKLLLPKMGGYLT+KD IHHGRLEMFMHEV
Sbjct:  233 RFRSSKEAEVNMAEMVMRDGKLPEVT-RFDSNCITPGTDFMFKLTKAFQAWIEYKMDTDPFWQQNARVVFSGPDVPGEGEHKVMDYIREARETEPDWRDDLRHCLYGLDADLIMLSLVTHEKHFSLLREKMSVRHSRRKKPKDPITYTRNDFELMEVSLLREMLRLQFQSQANDPKLPFKFELERVIDDFVFMCILVGNDFLPNVPHLDISDGALNHMMNMYKLLLPKMGGYLTKKDQIHHGRLEMFMHEV 482          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A835ZEW4_9STRA (5'-3' exoribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW4_9STRA)

HSP 1 Score: 395 bits (1015), Expect = 3.290e-131
Identity = 188/252 (74.60%), Postives = 219/252 (86.90%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREARVTEPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSRRKKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQ-LPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRS+KEAEQT+AE+V REG LP    RFDSNCITPGTDFM+ L +AFR WI  K++ DPFW+  AR++FSGPDVPGEGEHKVMDYIR AR TEPDW+ DLRHCLYGLDADLIMLSLVTHE +F+LLREK++VRHSRR++PKDPI YTR+DFELL VS+LREMLRLQF+AEA     LPF F LERVIDDFVFMC+ VGNDFLPN+PHLDIADGALN M+++Y+ +LP +GGYLT+KD IH GRLE+F+HEV
Sbjct:  166 RFRSAKEAEQTLAELVAREGALPE-GDRFDSNCITPGTDFMYNLGRAFREWIATKIEEDPFWRDGARIVFSGPDVPGEGEHKVMDYIRSARETEPDWKPDLRHCLYGLDADLIMLSLVTHEPHFNLLREKMSVRHSRRRRPKDPIHYTRDDFELLRVSMLREMLRLQFRAEASGAAPLPFPFSLERVIDDFVFMCMFVGNDFLPNMPHLDIADGALNTMLSIYRDMLPALGGYLTKKDEIHRGRLELFLHEV 416          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A7S2AHT5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AHT5_9STRA)

HSP 1 Score: 329 bits (843), Expect = 4.090e-106
Identity = 164/255 (64.31%), Postives = 197/255 (77.25%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQRE--GKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQN-ARVIFSGPDVPGEGEHKVMDYIREARVTEPDW-RDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSRRKKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRSSKE  Q + E+  R   G +P+   RFDSNCITPGTDFM+KL  AFR WI++KM  D FW +N A VIFSGPDVP EGEHKVM YIR  +  +PDW +  LRH  YGLDADLIMLSLVTHEK F LLREK++VRHSR  KPKDPI Y R DFELLEV+LLR+ML LQF+   +D +LPF+ +L+R+IDDFVF+C+L+GNDFLP++P LDIADG+LN MM+ YK LLP MGGYLT K  IH  RLE+++  +
Sbjct:  166 RFRSSKEQAQLLEELTARAPGGSIPTEDERFDSNCITPGTDFMYKLGVAFRKWIEFKMANDKFWIENGAEVIFSGPDVPEEGEHKVMSYIRRMKAEDPDWSKRGLRHIFYGLDADLIMLSLVTHEKNFMLLREKMSVRHSRGSKPKDPINYVREDFELLEVALLRKMLALQFRGLNEDVELPFELKLDRLIDDFVFICMLIGNDFLPHLPSLDIADGSLNLMMSTYKDLLPVMGGYLTHKVSIHRPRLEIYLQAI 420          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A7S1UDM3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDM3_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.470e-103
Identity = 155/255 (60.78%), Postives = 193/255 (75.69%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQ-NARVIFSGPDVPGEGEHKVMDYIREARVTEPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSRRKK---PKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRS+KEAEQ MA +V +  ++P    RFDSNCITPGT+FM++L  AFR WI +KMDTDP W +   RV+FSGPDVPGEGEHKVMDYIR AR  E DWR  + HCLYGLDADLIML LVTHE  F L RE++  R   R      +DP+ +T +D+E+LEV+++R+ML L+ +   +   LPF++ L+RV+DDFVF+C+LVGNDFLP++PHLDIADGA+N MM  YK LLPKMGGYLT K  IH GR E+FM +V
Sbjct:  102 RFRSAKEAEQMMAGLVAQGEEIPENVERFDSNCITPGTEFMYRLGMAFRKWIQFKMDTDPAWAEAGCRVVFSGPDVPGEGEHKVMDYIRTARGREKDWRAGMTHCLYGLDADLIMLGLVTHEPNFILFRERMQRRGRGRNGNGGQRDPLRFTHDDYEILEVTMIRKMLHLEMRKLVQSGDLPFEYSLQRVVDDFVFLCMLVGNDFLPHVPHLDIADGAINMMMATYKRLLPKMGGYLTDKGAIHFGRFELFMADV 356          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A7S1BBK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BBK1_9STRA)

HSP 1 Score: 299 bits (765), Expect = 1.370e-95
Identity = 154/251 (61.35%), Postives = 187/251 (74.50%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREARVTEPDWRDD-LRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSRRK--KPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFM 258
            RFRSSKEAE+T+A++V R  ++   S  FDSNCITPGTDFM KL+ AF+ WI++K  TDPFW+  A VIFSGPDV GEGEHKVMD+IRE    +P W ++ + HCLYGLDADLIML LVTHEK F LLREK++V    R+  + KD + Y R DFELLE+S+LREM+ LQF     +  L FKF+L+RVIDDFVFMC+LVGNDFLP+ PHLDIA GAL+ M+  Y  LL   GGYLT K+ IH  RL  F+
Sbjct:   40 RFRSSKEAEETLAQLVARGQEIADRSDTFDSNCITPGTDFMLKLNLAFQKWIEFKQRTDPFWRDGATVIFSGPDVEGEGEHKVMDFIREK---DPSWYEEGMTHCLYGLDADLIMLGLVTHEKNFVLLREKMSVVMGSRRGGQKKDMLNYGREDFELLELSVLREMMSLQFTKFRLNNDLGFKFDLDRVIDDFVFMCMLVGNDFLPHGPHLDIASGALSQMLTTYTDLLSNFGGYLTDKEKIHPERLTEFL 287          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A0G4EF62_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EF62_VITBC)

HSP 1 Score: 301 bits (771), Expect = 7.260e-94
Identity = 147/271 (54.24%), Postives = 193/271 (71.22%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGK-----LPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREARVTEPDWRDD------LRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSR---------RKKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRS+KE E  + +M           +     RFDSNCITPGTDFM+KL  A R W+ YK+ TDP W   A+VI SGPDVPGEGEHK+MDYIREA  T+P W+        L+HC+YGLDADLIMLSLV+H+  F LLREK+ V H R         R + +DP+T++R DFE+L+VS+LRE+L +QF+  AK P L F+++LER+IDDF+F+C L+GNDFLP+IPHLDIA+G++N ++ +Y  LLPK+GGYLT K  +H  RLE+F+  +
Sbjct:  102 RFRSAKEGELLLEQMKSSTNPDHSRWVDGDRKRFDSNCITPGTDFMYKLGLALRKWVAYKIQTDPVWADGAKVILSGPDVPGEGEHKIMDYIREASATDPTWKGTADNPAPLQHCMYGLDADLIMLSLVSHQPNFILLREKMAVIHPRKTRRDPGTGRVRKRDPMTFSREDFEILDVSILREVLYMQFRGIAKHPDLTFEWDLERLIDDFIFLCFLIGNDFLPHIPHLDIAEGSINDILALYIKLLPKLGGYLTDKAKLHPQRLEVFLRAI 372          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A7S2LFH0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LFH0_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.020e-91
Identity = 149/266 (56.02%), Postives = 184/266 (69.17%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREA---------RVTEPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITV------RHSRRKKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRSSKEAE   A+++ R+G LP  ++ FDSNCITPGTDFM KL  A R W++YK  TDP W+    V+ SGPDVPGEGEHKVMDYIRE            + P W   L H LYGLDADLIML L THE  F LLREK++V      RH  RKK KD + YTR+DFELLE+  LREM  +QF+  A   +L  ++++ RVIDDF+F+C+ VGNDFLP++PHL+I +GAL+ M+N Y  LLP+ GGYLT K  IH GRLE F + +
Sbjct:  175 RFRSSKEAEALAAKLLARDGSLPEQAA-FDSNCITPGTDFMLKLGLAMRKWVEYKQKTDPVWKNGCDVVISGPDVPGEGEHKVMDYIRETYSQYDPDDPSKSHPHWSPGLTHVLYGLDADLIMLGLATHEPNFMLLREKMSVVMAGRGRHKHRKK-KDMLEYTRDDFELLELRALREMFTIQFRKFADPGRLDAEYDVRRVIDDFIFICMFVGNDFLPHVPHLEIDNGALSLMLNNYIDLLPEWGGYLTNKGAIHPGRLEHFFYNL 438          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: K0S1C0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S1C0_THAOC)

HSP 1 Score: 291 bits (745), Expect = 5.510e-90
Identity = 149/265 (56.23%), Postives = 186/265 (70.19%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREARVT--------EPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITV------RHSRRKKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRSSKEAE+  A ++ R+G LP   + FDSNCITPGTDFM KL  A R WI+YK  TDP W+    V+ SGPDVPGEGEHKVMD+IR+ +           P W+  L H LYGLDADLIML L THE +F LLREK++V      RH  RKK KD + YTRNDF+LLE+S LREM ++QF+  A   +L  ++++ RVIDDF+FMC+ VGNDFLP++PHL+I +GAL+ M+N Y  LLP+ GGYLT K  IH  RLE F + +
Sbjct:  162 RFRSSKEAEKLAATILARDGSLPERDA-FDSNCITPGTDFMLKLGLAMRKWIEYKQQTDPAWKNGCDVVVSGPDVPGEGEHKVMDFIRDTKALYDPDDLEKSPHWQPSLTHVLYGLDADLIMLGLATHEPHFLLLREKMSVVMAGRGRHKHRKK-KDMLEYTRNDFDLLELSSLREMFKIQFRKFADSDRLKVQYDVCRVIDDFIFMCMFVGNDFLPHVPHLEIDNGALSLMLNNYIDLLPEWGGYLTDKGKIHPARLEQFFYNL 424          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A7S2SNR3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNR3_9STRA)

HSP 1 Score: 279 bits (714), Expect = 4.440e-89
Identity = 141/211 (66.82%), Postives = 163/211 (77.25%), Query Frame = 0
Query:   53 KLSKAFRAWIDYKMDTDPFWQQN-ARVIFSGPDVPGEGEHKVMDYIREARVTEPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSRR-KKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            KLS AF  WID+K   DPFW+ N A+VIFSGPDVPGEGEHKVM+Y+R AR T+ DW   LRH  YGLDADLIMLSLVTHEK F LLREK++VRH R  K PKDP  Y R DFELLE+SLLR+ML LQF+      +  FK ELER+IDDFVF+C+L+GNDFLP++PHLDIADG+LN MM  YK LLP MGGYLT K  IH  R E+F+ E+
Sbjct:    2 KLSLAFVKWIDFKCKNDPFWRSNGAQVIFSGPDVPGEGEHKVMEYVRRARETDEDWSPRLRHVFYGLDADLIMLSLVTHEKNFMLLREKMSVRHGRGGKAPKDPGNYGREDFELLEISLLRKMLSLQFKDLENPEKYTFKLELERLIDDFVFICMLIGNDFLPHLPHLDIADGSLNLMMTTYKDLLPVMGGYLTDKTSIHLPRFELFIREI 212          
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Match: A0A7S3PY69_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY69_9STRA)

HSP 1 Score: 288 bits (736), Expect = 8.280e-89
Identity = 149/266 (56.02%), Postives = 187/266 (70.30%), Query Frame = 0
Query:   11 RFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDFMFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREARVT---------EPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITV------RHSRRKKPKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDFVFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIHHGRLEMFMHEV 261
            RFRSS+EAE+  A ++ R+GKLP   S FDSNCITPGTDFM KLS A   WI++K  TDPFW+  A V+F+GP+VPGEGEHKVMDYIRE +            P W  ++ H LYGLDADLIML L+THE  F LLREK++V      RH  RKK KD + YTR+DFELLE+  LR+M ++QF+  A       K + +R+IDDFVFMC+LVGNDFLP+ PHL+I +GAL+ M+N Y  LLP+ GGYLT K+ IH  R E F++ +
Sbjct:  171 RFRSSREAEELAATILARDGKLPEGKS-FDSNCITPGTDFMLKLSIAMTKWIEFKQKTDPFWKNGADVVFTGPNVPGEGEHKVMDYIRECKEQYDPENPEKCHPHWSPEMTHVLYGLDADLIMLGLITHEPTFMLLREKMSVVMAGRGRHKHRKK-KDMLEYTRDDFELLELKALRQMFQIQFRKFADSDSFGDKHDSDRIIDDFVFMCMLVGNDFLPHNPHLEIDNGALSLMLNNYIDLLPEWGGYLTDKEKIHPHRFEHFLYNL 434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12332.1473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G490_ECTSI4.400e-16290.04Dhm exonuclease n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A835ZEW4_9STRA3.290e-13174.605'-3' exoribonuclease n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2AHT5_9STRA4.090e-10664.31Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1UDM3_9STRA1.470e-10360.78Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1BBK1_9STRA1.370e-9561.35Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A0G4EF62_VITBC7.260e-9454.24Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S2LFH0_9STRA2.020e-9156.02Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
K0S1C0_THAOC5.510e-9056.23Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2SNR3_9STRA4.440e-8966.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PY69_9STRA8.280e-8956.02Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 12..140
e-value: 2.9E-44
score: 151.3
NoneNo IPR availableGENE3D3.40.50.12390coord: 11..239
e-value: 2.5E-48
score: 166.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.599
IPR041412Xrn1, helical domainPFAMPF17846XRN_Mcoord: 190..261
e-value: 1.4E-23
score: 83.6
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 11..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12332contigH-paniculata_contig12332:218..7601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12332.1473.1mRNA_H-paniculata_contig12332.1473.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12332 218..7601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12332.1473.1 ID=prot_H-paniculata_contig12332.1473.1|Name=mRNA_H-paniculata_contig12332.1473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MFFFCFLFFVRFRSSKEAEQTMAEMVQREGKLPSTSSRFDSNCITPGTDF
MFKLSKAFRAWIDYKMDTDPFWQQNARVIFSGPDVPGEGEHKVMDYIREA
RVTEPDWRDDLRHCLYGLDADLIMLSLVTHEKYFSLLREKITVRHSRRKK
PKDPITYTRNDFELLEVSLLREMLRLQFQAEAKDPQLPFKFELERVIDDF
VFMCILVGNDFLPNIPHLDIADGALNHMMNMYKLLLPKMGGYLTRKDHIH
HGRLEMFMHEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR041412Xrn1_helical
IPR0270735_3_exoribonuclease