prot_H-paniculata_contig12217.1412.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12217.1412.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.590e-28 Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 0 Query: 1 MGTEIVPVAVAGPPRRIRVVFSSETGCIPRSNASLTQRWALIPPELKLVGDLAHHLGRQVAKHAGRG--SKSLVLTLDGFALPPTENLDVLRETDVVSLEL 99 M T +P AVA PRRIRVVF ++ GC+P SN +LT+RW IPP L ++GDLAHHL RQ+ + GR S SLVLTLDGF LPPTE+LDVLRETDVV+L L Sbjct: 54 MDTVALPPAVASSPRRIRVVFKADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLKRRKGRKARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTL 154
BLAST of mRNA_H-paniculata_contig12217.1412.1 vs. uniprot
Match: A0A452ZID7_AEGTS (Coilin n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZID7_AEGTS) HSP 1 Score: 60.1 bits (144), Expect = 3.260e-6 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 0 Query: 7 PVAVAGPPRRIRVVFSSETGCIPRSNASLTQRWALIPPELKLVGDLAHHLGRQVAKHAGRGSKSLVLTLDGFALPPTENLDVLRETDVVSLE 98 P A P R+R+VF +T + R+ L + W L+ PEL V DL+ H+ + H +VLT+DGFALPP E+ + R+ D++ ++ Sbjct: 30 PPAXXPSPVRLRLVFD-KTRLLRRAQRDLRRCWLLLRPELATVADLSAHVAARFRLHRSCPG-GVVLTMDGFALPPFESTCIFRDKDIIRVQ 119
BLAST of mRNA_H-paniculata_contig12217.1412.1 vs. uniprot
Match: A0A3B5ZYF5_WHEAT (Coilin n=23 Tax=Triticinae TaxID=1648030 RepID=A0A3B5ZYF5_WHEAT) HSP 1 Score: 60.5 bits (145), Expect = 5.940e-6 Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 0 Query: 7 PVAVAGPPRRIRVVFSSETGCIPRSNASLTQRWALIPPELKLVGDLAHHLGRQVAKHAGRGSKSLVLTLDGFALPPTENLDVLRETDVVSLE 98 P A + P R+R+VF +T + R+ L + W L+ PEL V DL+ H+ + H +VLT+DGFALPP E+ + R+ D++ ++ Sbjct: 4 PPAPSPSPVRLRLVFD-KTRLLRRAQRDLRRCWLLLRPELATVADLSAHVAARFRLHRSCPG-GVVLTMDGFALPPFESTCIFRDKDIIRVQ 93
BLAST of mRNA_H-paniculata_contig12217.1412.1 vs. uniprot
Match: A0A0P0Y9A7_ORYSJ (Coilin n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0Y9A7_ORYSJ) HSP 1 Score: 53.9 bits (128), Expect = 1.680e-5 Identity = 30/89 (33.71%), Postives = 50/89 (56.18%), Query Frame = 0 Query: 16 RIRVVFSSETGCIPRS--NASLTQRWALIPPELKLVGDLAHHLGRQVAKHAGRGSKSLVLTLDGFALPPTENLDVLRETDVVSLELLDT 102 R+R+VF ++ + RS + L + W L+PPEL V DLA H+ + S ++L++DGF LPP E+ + R+ D++ + T Sbjct: 10 RLRLVFDNQR-ILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARFRLRRSCPS-CVILSIDGFVLPPFESTCIFRDNDIIRQQFAHT 96
BLAST of mRNA_H-paniculata_contig12217.1412.1 vs. uniprot
Match: A0A8I6X8P6_HORVV (Coilin n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6X8P6_HORVV) HSP 1 Score: 58.9 bits (141), Expect = 1.830e-5 Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 0 Query: 14 PRRIRVVFSSETGCIPRSNASLTQRWALIPPELKLVGDLAHHLGRQVAKHAGRGSKSLVLTLDGFALPPTENLDVLRETDVVSLE 98 P R+R+VF +T + R+ L + W L+ PEL V DL+ H+ + H +VLT+DGFALPP E+ + R+ D++ ++ Sbjct: 11 PVRLRLVFD-KTRLLRRAQRDLRRCWVLLRPELATVADLSAHVATRFRLHRSCPG-GVVLTMDGFALPPFESTCIFRDKDIIRVK 93 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12217.1412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig12217.1412.1 ID=prot_H-paniculata_contig12217.1412.1|Name=mRNA_H-paniculata_contig12217.1412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=518bpback to top |