prot_H-paniculata_contig1216.1372.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1216.1372.1
Unique Nameprot_H-paniculata_contig1216.1372.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 6.130e-29
Identity = 66/160 (41.25%), Postives = 99/160 (61.88%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNP 165
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+ +A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P
Sbjct:   52 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 203          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 7.840e-28
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+ +A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P   H
Sbjct:  195 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 350          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.420e-27
Identity = 64/164 (39.02%), Postives = 99/164 (60.37%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+ +A  L++ Q  Y+ SM ERF V+ T+R PA   +P    G +     E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P   H
Sbjct:  131 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVQSTSRIPA---TPGADLGPQ----REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 286          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.110e-27
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+ +A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P   H
Sbjct:  908 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1063          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.160e-27
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+ +A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P   H
Sbjct: 1287 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1442          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.170e-27
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+ +A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P   H
Sbjct: 1307 FEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1462          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.170e-27
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+ +A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P   H
Sbjct: 1450 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1605          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 3.560e-27
Identity = 67/164 (40.85%), Postives = 99/164 (60.37%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+  A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAVAR +  P   H
Sbjct:  543 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 698          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 7.300e-27
Identity = 67/164 (40.85%), Postives = 98/164 (59.76%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L + F  K+LG+ E++ GC + R+ +A  L++ Q  Y+ SM ERF VK T+R PA   +P    G  PK   E EE   +  REA+G++MW +T  RP+++  VRAV R +  P   H
Sbjct:  845 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKMFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA---TPGADLG--PKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVVRHAHAPAKRH 1000          
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 9.410e-27
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    6 FEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFATELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKKTNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPNIACVVRAVARFSDNPGPAH 169
            FEQ +ADPC+FRK+VD  V M++ ++V DIL    +    E  A+ L ++F  K+LG+ +++ GC + R+  A  L++ Q  Y+ SM ERF VK T+R PA   +    K ++ K  E       +  REAVG++MW +T  RP+++  VRAVAR +  P   H
Sbjct:  499 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE-------WPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 654          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1216.1372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRS6_9PHAE6.130e-2941.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTL3_9PHAE7.840e-2840.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVD4_9PHAE1.420e-2739.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE2.110e-2740.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.160e-2740.85Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.170e-2740.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.170e-2740.85Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K164_9PHAE3.560e-2740.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE9_9PHAE7.300e-2740.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE9.410e-2739.02Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..103
e-value: 3.1E-13
score: 49.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1216contigH-paniculata_contig1216:18785..19312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1216.1372.1mRNA_H-paniculata_contig1216.1372.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1216 18287..19807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1216.1372.1 ID=prot_H-paniculata_contig1216.1372.1|Name=mRNA_H-paniculata_contig1216.1372.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MTAIEFEQSRADPCMFRKVVDGEVEMVVAVHVGDILAHQQNRATTEWFAT
ELERRFKLKDLGDAEFYMGCHVTRNRKAHELKLDQQMYVQSMAERFGVKK
TNRTPAMSESPALLKGDEPKTPEEKEEMKTFSYREAVGALMWAATTMRPN
IACVVRAVARFSDNPGPAHRRRWLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2