prot_H-paniculata_contig12155.1369.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12155.1369.1
Unique Nameprot_H-paniculata_contig12155.1369.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
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BLAST of mRNA_H-paniculata_contig12155.1369.1 vs. uniprot
Match: D8LF54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF54_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.540e-11
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0 
Query:    1 SEHGRHYHTLNHLADLLESAERDFDSFRNPRVVRLAIFFHESAENIVTYQPRPSAENE 58
            SE GRHYHT  H+AD+LE A+RDF + R+PR+V+LAIFFH+     V Y P+  +  E
Sbjct:   37 SEEGRHYHTFEHVADMLEQADRDFPNLRHPRLVQLAIFFHD-----VVYDPKSGSNEE 89
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12155.1369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF54_ECTSI3.540e-1153.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12155contigH-paniculata_contig12155:3428..7125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12155.1369.1mRNA_H-paniculata_contig12155.1369.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12155 2800..7125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12155.1369.1 ID=prot_H-paniculata_contig12155.1369.1|Name=mRNA_H-paniculata_contig12155.1369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
SEHGRHYHTLNHLADLLESAERDFDSFRNPRVVRLAIFFHESAENIVTYQ
PRPSAENERKFCVNFLPPAAFMLPTNTGKNENPRRALTWKPRLHYSTRET
WRHSNSWLVRAHDV*
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