prot_H-paniculata_contig1215.1364.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1215.1364.1
Unique Nameprot_H-paniculata_contig1215.1364.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2P6UYX8_9CHLO (Retrotransposon Ty1-copia subclass n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYX8_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 2.840e-24
Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   17 ARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            AR M +P+ + ++  K + RYL+  PD+GITFG  S G  L+ F DAD AGD++ R+STT Y F  NGGAISW SR Q  V  S+TEAEY+AA    KEG +L
Sbjct:  210 ARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWL 310          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI)

HSP 1 Score: 102 bits (255), Expect = 3.620e-24
Identity = 55/110 (50.00%), Postives = 68/110 (61.82%), Query Frame = 0
Query:   15 TSARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNG---HGLE--GFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            T ++    P  E ++    +FRYL     L +T+G        HGL   G+ DADWAGD  DR+ST+ YVFKL GGAISWCSRKQ+ +  SSTEAEYVA   A KEG +L
Sbjct:   78 TLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWL 187          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2N9GS71_FAGSY (Uncharacterized protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GS71_FAGSY)

HSP 1 Score: 102 bits (255), Expect = 3.620e-24
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    9 IQHTQYTSARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            + H   T +R M +P RE ++  K IFRYL    + GI F  +   + + G++DAD+AG+V+DR+STT YVF L+GG I W S  Q +V  S+TEAEY+A  EA KE  +L
Sbjct:   83 LAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWL 193          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2N9HGZ8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HGZ8_FAGSY)

HSP 1 Score: 104 bits (260), Expect = 5.020e-24
Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    9 IQHTQYTSARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            + H   T +R M +P RE ++  K IFRYL    + GI F  +   + + G++DAD+AG+V+DR+STT YVF L+GG I W S  Q +VT S+TEAEY+AA E  KE  +L
Sbjct:  260 LAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVTMSTTEAEYMAAAETAKEALWL 370          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2P6UYV9_9CHLO (Retrovirus-related Pol poly from transposon TNT 1-94 n=3 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV9_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 6.200e-24
Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   17 ARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            AR M +P+ + ++  K + RYL+  PD+GITFG  S G  L+ F DAD AGD++ R+STT Y F  NGGAISW SR Q  V  S+TEAEY+AA    KEG +L
Sbjct:  762 ARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWL 862          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2P6UYV5_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV5_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 6.370e-24
Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   17 ARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            AR M +P+ + ++  K + RYL+  PD+GITFG  S G  L+ F DAD AGD++ R+STT Y F  NGGAISW SR Q  V  S+TEAEY+AA    KEG +L
Sbjct:  866 ARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWL 966          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2P6UZ08_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ08_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 6.450e-24
Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   17 ARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            AR M +P+ + ++  K + RYL+  PD+GITFG  S G  L+ F DAD AGD++ R+STT Y F  NGGAISW SR Q  V  S+TEAEY+AA    KEG +L
Sbjct: 1028 ARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWL 1128          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: UPI001262FCA1 (secreted RxLR effector protein 161-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262FCA1)

HSP 1 Score: 99.0 bits (245), Expect = 8.200e-24
Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 0
Query:   17 ARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLE--GFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            +R M +P +E +S  K + RYL    DL + +G  + G  L+  GF+DADW GD++ R+ST+ YVF L G A+ W S++Q  V  SSTEAEY+A   AGKE  +L
Sbjct:   32 SRFMSNPGKEHWSAVKRVLRYLRGTSDLSLCYGGMATGDELDVIGFVDADWGGDLDSRRSTSGYVFSLFGAAVCWMSKRQSTVALSSTEAEYMALTHAGKEAMWL 136          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2N9HJ76_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HJ76_FAGSY)

HSP 1 Score: 104 bits (260), Expect = 1.150e-23
Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    9 IQHTQYTSARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            + H   T +R M +P RE ++  K IFRYL    + GI F  +S  + + G++DAD+AG+V+DR+STT YVF L+GG I W S  Q +V  S+TEAEY+A  EA KE  +L
Sbjct:  778 LAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWL 888          
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Match: A0A2N9GRR2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GRR2_FAGSY)

HSP 1 Score: 104 bits (260), Expect = 1.170e-23
Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    9 IQHTQYTSARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGDKSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWSSTEAEYVAAGEAGKEGGYL 119
            + H   T +R M +P RE ++  K IFRYL    + GI F  +S  + + G++DAD+AG+V+DR+STT YVF L+GG I W S  Q +V  S+TEAEY+A  EA KE  +L
Sbjct: 1060 LAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWL 1170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1215.1364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6UYX8_9CHLO2.840e-2452.43Retrotransposon Ty1-copia subclass n=1 Tax=Micract... [more]
A0A060SU91_PYCCI3.620e-2450.00Uncharacterized protein n=2 Tax=Pycnoporus cinnaba... [more]
A0A2N9GS71_FAGSY3.620e-2445.95Uncharacterized protein n=3 Tax=Fagus sylvatica Ta... [more]
A0A2N9HGZ8_FAGSY5.020e-2446.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6UYV9_9CHLO6.200e-2452.43Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2P6UYV5_9CHLO6.370e-2452.43Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
A0A2P6UZ08_9CHLO6.450e-2452.43Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
UPI001262FCA18.200e-2445.71secreted RxLR effector protein 161-like n=1 Tax=Pi... [more]
A0A2N9HJ76_FAGSY1.150e-2346.85Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9GRR2_FAGSY1.170e-2346.85Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 17..113
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 17..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1215contigH-paniculata_contig1215:10314..10682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1215.1364.1mRNA_H-paniculata_contig1215.1364.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1215 10162..11098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1215.1364.1 ID=prot_H-paniculata_contig1215.1364.1|Name=mRNA_H-paniculata_contig1215.1364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
MPQQELDLIQHTQYTSARRMEDPSREDFSTCKCIFRYLSTVPDLGITFGD
KSNGHGLEGFLDADWAGDVEDRKSTTKYVFKLNGGAISWCSRKQEVVTWS
STEAEYVAAGEAGKEGGYLGSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like