prot_H-paniculata_contig12139.1357.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12139.1357.1
Unique Nameprot_H-paniculata_contig12139.1357.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: D7FN02_ECTSI (5\'-AMP-activated protein kinase subunit gamma-1 (AMPK gamma-1 chain) (AMPKg) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN02_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.000e-30
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 0
Query:   55 KNLECRLSDIVDQPGNEVLRDRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            +NL+ +LSDI+ QPGNE LRDRLITCSP DTLQTVFEKFAD+RFKRIV VDEE+RCKGIISVSDLLAYFL
Sbjct:  276 ENLDRKLSDILGQPGNEGLRDRLITCSPQDTLQTVFEKFADFRFKRIVVVDEEARCKGIISVSDLLAYFL 345          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A836CIU9_9STRA (5'-AMP-activated protein kinase subunit gamma-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.410e-27
Identity = 50/70 (71.43%), Postives = 62/70 (88.57%), Query Frame = 0
Query:   55 KNLECRLSDIVDQPGNEVLRDRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            +NL+ +L DI+ QPGNEVLRD L+TC+P DTLQ++FEKFA+ +FKRIVCVD + RCKG+ISVSDLLAYFL
Sbjct:  237 RNLDAKLCDILAQPGNEVLRDSLVTCAPSDTLQSIFEKFAEVKFKRIVCVDADHRCKGLISVSDLLAYFL 306          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A7S2XY98_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY98_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.180e-15
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0
Query:   54 AKNLECRLSDIVDQPGNEVLRDRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYF 123
            A+NLE  +SD+++    + + DRL TC   DTLQTVFE FA+ RF+ +VCVDE   C GIISV DLL+YF
Sbjct:  249 ARNLEAVVSDVLNTRREQEMPDRLHTCLATDTLQTVFEMFAEVRFRTLVCVDEAFHCVGIISVHDLLSYF 318          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A7S2SVN1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVN1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 8.770e-13
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
Query:   56 NLECRLSDIVDQ-PGNEVLRDRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYF 123
            NL   L  I++Q P  +V RDRL TCS   +LQ++FE+FA+  F R+VCVD+E RC GI+S  DL+ YF
Sbjct:  263 NLRVTLQQILEQKPTEDVPRDRLETCSVHASLQSIFERFAEVGFHRLVCVDDERRCLGIVSARDLILYF 331          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A7S0GL11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GL11_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.020e-12
Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 0
Query:   55 KNLECRLSDIVDQPGNEVLR-DRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            +NL   LS+I+ +   +V   DRL TCSP  TLQ++FE FA +RF R++  DE  RC G+IS  DL+AYF+
Sbjct:  297 QNLNLTLSEILAEQRTDVTTPDRLHTCSPSHTLQSIFEYFAHHRFNRLIVTDERQRCMGVISARDLVAYFI 367          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A7S2PRW3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRW3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.630e-11
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   75 DRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            DRL TCSP  TLQ++FE FA  +F R++ VDEE RC G++S  DL+AYF+
Sbjct:  178 DRLHTCSPTHTLQSIFEYFAQLKFNRLIVVDEEHRCVGVVSARDLVAYFV 227          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A7S2LPY4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPY4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.240e-10
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   75 DRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            DRL TCSP  TLQ++FE FA  +F R++ VDEE RC G++S  DL+AYF+
Sbjct:  313 DRLHTCSPTHTLQSIFEYFAQLKFNRLIVVDEEHRCVGVVSARDLVAYFV 362          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A7S1BKI0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKI0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.950e-10
Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   55 KNLECRLSDIVDQPGNEVLR---------DRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            +NL   L +I+DQ   E+L          DRL TC+P  TLQ++FE FA  +F R++  D++ RC G++S  DL+AYF+
Sbjct:  262 RNLNLTLGEILDQQ-REILTTQRADVSTPDRLHTCTPSHTLQSIFEYFAQLKFNRLIVTDDDHRCVGVVSARDLVAYFV 339          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: K0T0B7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T0B7_THAOC)

HSP 1 Score: 65.1 bits (157), Expect = 7.840e-10
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   56 NLECRLSDIVDQPGNEVLR-DRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            NL   L  ++ Q   +V   D L TCS   TLQ+VFE FA ++F R++CVDEE R  G++S  DL+AYF+
Sbjct:  297 NLNLTLEVLMAQQRTDVTTPDALHTCSTRHTLQSVFEYFAQWKFNRLICVDEEERVVGVVSARDLVAYFM 366          
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Match: A0A7S4JD72_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4JD72_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.180e-9
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0
Query:   56 NLECRLSDIVDQPGNEVLR-DRLITCSPDDTLQTVFEKFADYRFKRIVCVDEESRCKGIISVSDLLAYFL 124
            NL+  L  ++ Q   +V   D L TC+P  TLQ++FE FA ++F R+V VDEE R  G+IS  DL+AYFL
Sbjct:  380 NLDVPLESLLAQRRTDVTTPDALHTCTPRHTLQSIFEYFAQWKFNRLVVVDEEERPVGVISARDLVAYFL 449          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12139.1357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN02_ECTSI2.000e-3084.295\'-AMP-activated protein kinase subunit gamma-1 (... [more]
A0A836CIU9_9STRA3.410e-2771.435'-AMP-activated protein kinase subunit gamma-1 n=... [more]
A0A7S2XY98_9STRA3.180e-1555.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SVN1_9STRA8.770e-1352.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0GL11_9STRA2.020e-1249.30Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2PRW3_9STRA5.630e-1158.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2LPY4_9STRA1.240e-1058.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1BKI0_9STRA3.950e-1041.77Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
K0T0B7_THAOC7.840e-1047.14Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4JD72_9STRA1.180e-948.57Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 76..124
e-value: 4.2E-8
score: 42.9
IPR000644CBS domainPFAMPF00571CBScoord: 71..123
e-value: 7.3E-12
score: 45.5
IPR000644CBS domainPROSITEPS51371CBScoord: 72..124
score: 11.248
NoneNo IPR availableGENE3D3.10.580.10coord: 45..124
e-value: 3.5E-16
score: 61.2
NoneNo IPR availablePANTHERPTHR13780AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNITcoord: 55..123
NoneNo IPR availablePANTHERPTHR13780:SF35LD22662Pcoord: 55..123
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.48
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 66..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12139contigH-paniculata_contig12139:969..2659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12139.1357.1mRNA_H-paniculata_contig12139.1357.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12139 316..4282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12139.1357.1 ID=prot_H-paniculata_contig12139.1357.1|Name=mRNA_H-paniculata_contig12139.1357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MLPVPLAYLYSFLFVNADSSFAANVPQTTLLTTWAANKKCRSSGGSTAEL
NMDAKNLECRLSDIVDQPGNEVLRDRLITCSPDDTLQTVFEKFADYRFKR
IVCVDEESRCKGIISVSDLLAYFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom