prot_H-paniculata_contig12137.1356.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12137.1356.1
Unique Nameprot_H-paniculata_contig12137.1356.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A2I0WJT9_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WJT9_9ASPA)

HSP 1 Score: 105 bits (261), Expect = 1.470e-25
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDEE 113
            MAR+ +I  ++ ++FWAEAV +A+Y LNR PT+     TP E W  +    DH  +F C  YV    Q+RHKL++K   G+FLGY   S  Y  +NL+ + +  SR V+FDE+
Sbjct:  104 MARSMLIAKDIPKKFWAEAVNTAVYVLNRCPTKAVKDITPIEAWSGDKPSVDHFRIFGCLCYVHIPKQKRHKLEEKPDKGIFLGYSSQSKGYIFFNLKTQQLVTSRDVKFDED 216          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A1R3HGA4_COCAP (Integrase, catalytic core n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HGA4_COCAP)

HSP 1 Score: 109 bits (272), Expect = 2.090e-25
Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDE 112
            M+R  +    + ++FWAEAV +++Y LNR  TR  NG TPYE W+      DHL +F C  Y      +R KLD KA  G+FLGY  +   YR YNL+ + V LSR+V+FDE
Sbjct:  456 MSRCLLFEKKLPKKFWAEAVSTSVYLLNRLSTRAINGKTPYEAWYGVKPSVDHLRIFGCICYAYVPEVKRDKLDHKADTGIFLGYSSNVKGYRVYNLKTEKVILSRNVKFDE 567          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A7C8ZAD7_OPUST (Uncharacterized protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZAD7_OPUST)

HSP 1 Score: 103 bits (257), Expect = 1.180e-24
Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDE 112
            M R+ M    + +RFWAEAV +A+Y LN +PT+   G TPYE W     K  HL VF C AY +  SQ RHKLD+K+   +F+GY   S +Y+ YN  +  V +SR V FDE
Sbjct:    1 MGRSMMNARAVPKRFWAEAVATAVYLLNISPTKAVYGRTPYEAWTGNKPKVSHLRVFGCIAYALVHSQLRHKLDEKSEKCIFVGYSTQSKAYKLYNPISGKVLVSRDVVFDE 112          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A0S3RLE5_PHAAN (Uncharacterized protein (Fragment) n=3 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RLE5_PHAAN)

HSP 1 Score: 96.7 bits (239), Expect = 1.050e-23
Identity = 47/106 (44.34%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSR 106
            MAR+ +   +M   FWAEAV +A+Y LNR PT+     TP E W        HL VF    Y+    Q+RHKL+DK   G+FLGY   S  YR YNL+ K + +SR
Sbjct:    3 MARSMLKEKSMPNTFWAEAVYTAVYILNRCPTKAVQDKTPIEAWSGRKPSAKHLRVFGSICYIHVPDQRRHKLEDKTIRGIFLGYSTQSKGYRVYNLQTKKLIISR 108          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A6A3C4D2_HIBSY (FAD-binding Berberine family protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C4D2_HIBSY)

HSP 1 Score: 102 bits (255), Expect = 4.110e-23
Identity = 52/115 (45.22%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDEEDF 115
            MAR+ +    + R FWAEAVR A+Y LNR PT+     TP E W  +     HL +F C AY     Q R KLDD+    +F+GYDE S +YR YN   K + +SR V FDE D+
Sbjct:  457 MARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 571          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY)

HSP 1 Score: 102 bits (255), Expect = 4.120e-23
Identity = 52/115 (45.22%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDEEDF 115
            MAR+ +    + R FWAEAVR A+Y LNR PT+     TP E W  +     HL +F C AY     Q R KLDD+    +F+GYDE S +YR YN   K + +SR V FDE D+
Sbjct:  399 MARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 513          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 102 bits (255), Expect = 4.140e-23
Identity = 52/115 (45.22%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDEEDF 115
            MAR+ +    + R FWAEAVR A+Y LNR PT+     TP E W  +     HL +F C AY     Q R KLDD+    +F+GYDE S +YR YN   K + +SR V FDE D+
Sbjct: 1425 MARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 1539          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A151S1R8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S1R8_CAJCA)

HSP 1 Score: 95.5 bits (236), Expect = 4.430e-23
Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDE 112
            MAR+ +    +   F AEAV +A+Y LNR PT+     TP E W ++     HL VF    Y+    ++RHKL+DK   G+FLGY+  S  YR YNL+ K + +SR +  DE
Sbjct:    7 MARSMLKEKGLPNTFRAEAVYTAVYLLNRCPTKAVRDKTPIEAWSEKKPSAKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYNSQSKGYRVYNLQTKRLTISRDIEVDE 118          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A0L9VQR0_PHAAN (Integrase catalytic domain-containing protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9VQR0_PHAAN)

HSP 1 Score: 97.1 bits (240), Expect = 4.810e-23
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 0
Query:    2 ARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDEED 114
            A++  + + + ++FWAEAV +A Y +NR+P+ P     P E W  + +K  HL VF C AYV    Q R+KLD K+    FLGY ED   YR ++ ENK +  SR V F+E+D
Sbjct:   62 AKSMRVQSGLPKQFWAEAVNTAAYLINRSPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVAYVHISDQVRNKLDPKSKKCTFLGYGEDEFGYRIWDDENKKMTRSRDVIFNEKD 174          
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Match: A0A6A1WU20_9ROSI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1WU20_9ROSI)

HSP 1 Score: 100 bits (249), Expect = 7.170e-23
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query:    1 MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLKFDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENKSVQLSRHVRFDE 112
            MA + ++   + + FWAEAV +A+Y LNR PT+     TP E W        HL VF    Y+   +Q+RHKL++K+  G+FLGY   S  YR YNLE K +  SR V+FDE
Sbjct:   67 MAISMLMEKGLPKMFWAEAVYTAVYLLNRCPTKAVQDKTPVEAWSGLKSSAKHLRVFGSICYIHIPAQRRHKLEEKSQKGIFLGYGLVSKGYRVYNLETKKLTFSRDVKFDE 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12137.1356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I0WJT9_9ASPA1.470e-2542.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A1R3HGA4_COCAP2.090e-2545.54Integrase, catalytic core n=1 Tax=Corchorus capsul... [more]
A0A7C8ZAD7_OPUST1.180e-2446.43Uncharacterized protein n=2 Tax=Opuntia streptacan... [more]
A0A0S3RLE5_PHAAN1.050e-2344.34Uncharacterized protein (Fragment) n=3 Tax=Phaseol... [more]
A0A6A3C4D2_HIBSY4.110e-2345.22FAD-binding Berberine family protein n=1 Tax=Hibis... [more]
A0A6A3ACL1_HIBSY4.120e-2345.22Putative cyclic nucleotide-gated ion channel 8 n=1... [more]
A0A6A2WXP0_HIBSY4.140e-2345.22Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
A0A151S1R8_CAJCA4.430e-2341.07Retrovirus-related Pol polyprotein from transposon... [more]
A0A0L9VQR0_PHAAN4.810e-2342.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A1WU20_9ROSI7.170e-2343.75Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..114
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 9..114
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 10..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12137contigH-paniculata_contig12137:496..840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12137.1356.1mRNA_H-paniculata_contig12137.1356.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12137 496..1365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12137.1356.1 ID=prot_H-paniculata_contig12137.1356.1|Name=mRNA_H-paniculata_contig12137.1356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MARANMITANMGRRFWAEAVRSALYYLNRAPTRPHNGGTPYEKWHDETLK
FDHLCVFSCTAYVVFQSQQRHKLDDKAWAGVFLGYDEDSPSYRTYNLENK
SVQLSRHVRFDEEDF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf