prot_H-paniculata_contig12136.1355.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12136.1355.1
Unique Nameprot_H-paniculata_contig12136.1355.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length767
Homology
BLAST of mRNA_H-paniculata_contig12136.1355.1 vs. uniprot
Match: A0A6H5K102_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K102_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 1.630e-90
Identity = 416/869 (47.87%), Postives = 462/869 (53.16%), Query Frame = 0
Query:    1 MESVNVEMDLRNFIRSARREVASDAAVAAKTAEAAEXXXXXXXXXXXFFAHSDGSPGIAVG-------------TGVLSNRADVRVAAQAFHRLFGVGPDLPPPPTEEPWSPAETEGEMPSSCGQSLLDLFQVPLMTKEDISRYLDAMDPVAGAAASEAAAAAIKALGATTLLAGGR-KASFDAQTDAAIAGLPSHYPMVTPASSVFEVLGFAAQVRHAESYAASEAANEILPKPGGREADADVAAAVAGSAVGAGMMVAPPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDKSTMGIVGSPVPAPPL-----------QVRSSASATAVSA---------------------FATLAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPCLALAAERPSVFAATLADDVLEALGAEGAAAAG-------------------------GEEEDAG----VVVAHAVEALLRDGGEGQGVKGCEVDAAEKACADSSVSSQRLLLALCSLVCGEKNISGVNNSTSTGGTNNGNIIDHKQDEGGFSPILLSPRSFSALARLLRASLDQAAISREFLQARNCLVISALFAVGGAEYVSWLREAKTKGGSSGGKDGGDTL-------AVMADSELVSAAGALDRRQQQQ-----------PGGE---------AGYLLQRELRRHRVWATIELWEVTMSDSVVMALDGGGAKAERWLPADTRTAL 767
            ME+VNVEMDLRNFIRSARREVASD+           XXXXXXXXXX   A    +  +                 GVLS+RAD R AA A  RLFGVG DLPPPPTEE W P E EGE P++C Q+L++LF  PL+TKEDIS YLDA DPVAGAAASEAAAAAIKALGA TL  G R  A+ DA+ DAA+A L SHYP+VTPA+SV+EVLGFAAQ RHA++Y    A        GG     D  +         G     P+                                          XXXXXXXXXXXXXXXXXXXXXX                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXX            P  A P            +  S     AV                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + SPCLALA+ RPSVFAATLADDVLE+L AEGA A                           G  +D G      VA AVEALL  G   + +K  EVDAA +AC+ S  SS RLLLALC   C     +   ++     T             GF+P+ L P SF+ALARLLRASLDQAA  REFLQARNCLV + LFAV G +Y+SWLRE   + GS  GK G           AVMA+SELVSAAG LD                 P GE         AGYLL RELRRH VWA IELWEV+MSDSVVMA++GGG +AERWL  DT  A+
Sbjct:  331 MEAVNVEMDLRNFIRSARREVASDSVAXXXXXXXXXXXXXXXXXXXAVSASGFAASPVEAAHGLXXXXXXXXXXXGVLSSRADRRGAALAIQRLFGVGQDLPPPPTEEAWVPPEVEGETPAACRQTLVELFHAPLITKEDISMYLDATDPVAGAAASEAAAAAIKALGAPTLAGGARGSAAQDAKMDAALAKLSSHYPVVTPAASVYEVLGFAAQARHAKNYKDLLAGASDAGVDGGGVGGVDGGSGNGEIVDAEGRASQRPLPCTGACAPASEQRGGAADGANAPEGSSGSNVAGSSSGNGENTXXXXXXXXXXXXXXXXXXXXXXSSGANAEKATPSPDGVVNDKPMSSSSRREGLDGSVIGGVAAAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAATLAAATPXXXXXXXXXXXXXXXXXPTAATPAPXPXXXXXXXXEEDSQPPPAAVDPQGEDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEVAVTVSPCLALASRRPSVFAATLADDVLESLRAEGAGATDRRRSXXXXXXXXXXXXXXXXXXEGPGVGDDRGGDPATAVARAVEALLT-GXXXRTMKAEEVDAAAEACSRSPSSSNRLLLALCQHACPSTTTTASGDNQGPSATTGSGSTXXGSGPRGFAPVRLQPASFAALARLLRASLDQAASDREFLQARNCLVTAGLFAVEGDDYLSWLRE---QHGSQQGKSGXXXXXXXXXIPAVMANSELVSAAGKLDEVSALSSSAAAAPAADVPSGEGAGEAEEEAAGYLLLRELRRHPVWAAIELWEVSMSDSVVMAMEGGGERAERWLTRDTLDAM 1195          
BLAST of mRNA_H-paniculata_contig12136.1355.1 vs. uniprot
Match: D8LEI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI7_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 1.410e-62
Identity = 317/816 (38.85%), Postives = 356/816 (43.63%), Query Frame = 0
Query:    1 MESVNVEMDLRNFIRSARREVASDAAVAAKTAEAAEXXXXXXXXXXXFFAHSDGSPGIAVGT----------------GVLSNRADVRVAAQAFHRLFGVGPDLPPPPTEEPWSPAETEGEMPSSCGQSLLDLFQVPLMTKEDISRYLDAMDPVAGAAASEAAAAAIKALGATTLLAGGR-KASFDAQTDAAIAGLPSHYPMVTPASSVFEVLGFAAQVRHAESY-----AASEAANEILPKPGGREADADVAAAVAGSAVGAGMMVAPPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDKSTMGIVGSPVPAPPLQVRSSASATAVSAFATLAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPCLALAAERPSVFAATLADDVLEALGAEGAAAAGGEEEDAGVVVAHAVEALLRDGGEGQGVKGCEVDAAEKACADSSVSSQRLLLALCSLVCGEKNISGVNNSTSTGGTNNGNIIDHKQDEGGFSPILLSPRSFSALARLLRASLDQAAISREFLQARNCLVISALFAVGGAEYVSWLREAKTKGGSSGGKDGGDTLA-----VMADSELVSAAGALDRRQQQQ-------------PGGE---------AGYLLQRELRRHRVWATIELWEVTMSDSVVMALDGGGAKAERWLPADTRTAL 767
            ME+VNVEMDLRNFIRSARREVASD+           XXXXXXXXXXX    + GS    V                  GVLS+RAD R AA A  RLFGVG DLPPPPTEE W P E EGE P++C Q+L++LF  PL+TKEDIS YLDA DPVAGAAASEAAAAAIKALGA TL  G R  A+ DA+ DAA+A L SHYP+VTPA+SV+EVLGFAAQ RHA++Y      AS+A             DA+            G +  PP+        XXXXXXXXXXXXXXXXXXX                                                                                                                                                                   S  A  A AT  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                               +K  +VDAA +AC+                           ++     T               +P+ L P SF ALARLLRASLDQAA  REFLQARNCLV + LFAV G  YVSWLRE   + GS  GK G          VMAD+ELVSAA  L                    PGGE         AGYLL RELRRH VWA IELWEV+MSDSVVMA++GGGA+AERWL  DT  A+
Sbjct:  335 MEAVNVEMDLRNFIRSARREVASDSVAXXXXXXXXXXXXXXXXXXXXXXXSAPGSATSLVEAANGVGXXXXXXXXXXXGVLSSRADRRGAALALQRLFGVGQDLPPPPTEEEWVPPEVEGETPAACRQTLVELFHAPLITKEDISMYLDATDPVAGAAASEAAAAAIKALGAPTLAGGARGAAAMDAKMDAALAKLSSHYPVVTPAASVYEVLGFAAQARHAKNYKDLLAGASDAGLGXXXXXXXXXGDAE------------GRVSQPPIPCPDAGAGXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------SLRADGAGATERRGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------------------------------------------------MKADQVDAAAEACSXXXXXXXXXXXXXXQHXXXXXXXXASGDNQGPSATTGSGSXXXXXXXXXXAPVRLQPASFVALARLLRASLDQAASDREFLQARNCLVTAGLFAVDGGNYVSWLRE---QDGSQQGKSGXXXXXXXXXXVMADNELVSAARKLXXXXXXXXXXXXXXXPAADVPGGEGAGDADEEAAGYLLLRELRRHPVWAAIELWEVSMSDSVVMAMEGGGARAERWLTRDTLDAM 924          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12136.1355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K102_9PHAE1.630e-9047.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEI7_ECTSI1.410e-6238.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 350..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12136contigH-paniculata_contig12136:82..6577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12136.1355.1mRNA_H-paniculata_contig12136.1355.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12136 76..6577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12136.1355.1 ID=prot_H-paniculata_contig12136.1355.1|Name=mRNA_H-paniculata_contig12136.1355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=767bp
MESVNVEMDLRNFIRSARREVASDAAVAAKTAEAAEREAAEGGGGGGFFA
HSDGSPGIAVGTGVLSNRADVRVAAQAFHRLFGVGPDLPPPPTEEPWSPA
ETEGEMPSSCGQSLLDLFQVPLMTKEDISRYLDAMDPVAGAAASEAAAAA
IKALGATTLLAGGRKASFDAQTDAAIAGLPSHYPMVTPASSVFEVLGFAA
QVRHAESYAASEAANEILPKPGGREADADVAAAVAGSAVGAGMMVAPPMS
SEGSVAGGGGGSGVNKGESGAAATAAGEEKGSGVVAAVLNKVSEATADES
KKPRKSGGGGGSGGNGGGGGMAGIFAAAAAAFGAADSPRDPAVATAVAVV
EEEEEEEDEFGAKEEEKNEETPSGSGGGGTAVVNGASGAVASSTSTAVAP
AVAAIYAGNSSSSSSVDKSTMGIVGSPVPAPPLQVRSSASATAVSAFATL
AQQQQQQQQQQRLSISGGSAKSLMVTTSGSSSSASSLILSSSPCLALAAE
RPSVFAATLADDVLEALGAEGAAAAGGEEEDAGVVVAHAVEALLRDGGEG
QGVKGCEVDAAEKACADSSVSSQRLLLALCSLVCGEKNISGVNNSTSTGG
TNNGNIIDHKQDEGGFSPILLSPRSFSALARLLRASLDQAAISREFLQAR
NCLVISALFAVGGAEYVSWLREAKTKGGSSGGKDGGDTLAVMADSELVSA
AGALDRRQQQQPGGEAGYLLQRELRRHRVWATIELWEVTMSDSVVMALDG
GGAKAERWLPADTRTAL
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