prot_H-paniculata_contig1213.1351.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1213.1351.1
Unique Nameprot_H-paniculata_contig1213.1351.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length446
Homology
BLAST of mRNA_H-paniculata_contig1213.1351.1 vs. uniprot
Match: A0A6H5JL38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL38_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 4.090e-101
Identity = 165/248 (66.53%), Postives = 191/248 (77.02%), Query Frame = 0
Query:  195 WMEFEGRGEGRL----KAAEGS-LKGALRSYDKLLREHYLKMSFVQATALGVVGDSIAQHLERRWYPGQRFDLTRSAHAGILNMIIGKRAEVDGVFTPRWYNLLDNVNEERTLPVAFGKALAASMVYSPFANGLFLAGARALRYGPKARFNWAEWRRQLMVCTVRDFEMWPPLHVLSFWLLPKHWRPLTSHVVGVALLAVISSTGLTDAGLPLGQRAVPLLMRWARVAADAIVDRVRSKDRRAAAGAP 437
            W +  GR +G +    +  +G+  KGAL SYD LL EHYLKMSF QATALGVVGD++AQ LER   PGQR++  R+ HAGILNMII      DG+FTP WYNL+D VN+E TL +AF KA+A+S+ YSPFANGLFLAGAR LRYG K RF WA WRRQL VCT+RDFEMWPPLHVL+FWL+PKHWRPL  H+ GV LLAVIS TGLTDAGLPLGQRAVPL+MRWAR    A+  R+  K RRA+ GAP
Sbjct:  192 WEKVTGRVDGFIDGWRRDGDGNPFKGALGSYDALLEEHYLKMSFGQATALGVVGDTVAQRLERWRNPGQRYEFLRTVHAGILNMII------DGIFTPHWYNLVDYVNDEMTLGLAFAKAVASSVFYSPFANGLFLAGARVLRYGFKTRFGWAVWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLMMRWAR----AVGGRLSGKGRRAS-GAP 428          
BLAST of mRNA_H-paniculata_contig1213.1351.1 vs. uniprot
Match: D8LNF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF3_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.970e-61
Identity = 102/137 (74.45%), Postives = 114/137 (83.21%), Query Frame = 0
Query:  301 TLPVAFGKALAASMVYSPFANGLFLAGARALRYGPKARFNWAEWRRQLMVCTVRDFEMWPPLHVLSFWLLPKHWRPLTSHVVGVALLAVISSTGLTDAGLPLGQRAVPLLMRWARVAADAIVDRVRSKDRRAAAGAP 437
            TL +AF KA+A+S+ YSPFANGLFLAGAR LRYG K RF WAEWRRQL VCT+RDFEMWPPLHVL+FWL+PKHWRPL  H+ GV LLAVIS TGLTDAGLPLGQRAVPL+MRWAR    A+  R+  K RRA+ GAP
Sbjct:    2 TLGLAFVKAVASSVFYSPFANGLFLAGARVLRYGFKTRFGWAEWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLMMRWAR----AVGGRLSGKGRRAS-GAP 133          
BLAST of mRNA_H-paniculata_contig1213.1351.1 vs. uniprot
Match: A0A7S2UZM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM4_9STRA)

HSP 1 Score: 163 bits (412), Expect = 8.700e-43
Identity = 81/191 (42.41%), Postives = 121/191 (63.35%), Query Frame = 0
Query:  214 KGALRSYDKLLREHYLKMSFVQATALGVVGDSIAQHLERRWYPGQRFDLTRSAHAGILNMIIGKRAEVDGVFTPRWYNLLDNVNEERTLPVAFGKALAASMVYSPFANGLFLAGARALRYGPKA--RFNWAEWRRQLMVCTVRDFEMWPPLHVLSFWLLPKHWRPLTSHVVGVALLAVIS-STGLTDAGLP 401
            +G  + YD LLR HYL MSF QAT LGV+GD +AQ +E R +  + +++ R+ H G L M+I      DG+ TP +YN L+ ++E+RT+PV   K    + ++ P ANG+FLAG   L++G      FN+A W+ QL+V T+RD ++WP L +L+F LLPKHWRPL S +  + ++  +  +TG +    P
Sbjct:  138 RGLFKKYDNLLRRHYLSMSFAQATVLGVLGDLLAQGIELRLFR-RSYNVKRTMHVGFLTMLI------DGLATPHYYNALELISEKRTMPVVLLKTFIGTAIFGPVANGVFLAGVPLLQHGLDIVKMFNFASWKHQLLVATIRDLQIWPLLDMLNFKLLPKHWRPLASSLAALGVITFLGFATGFSQTTTP 321          
BLAST of mRNA_H-paniculata_contig1213.1351.1 vs. uniprot
Match: A0A835YIQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIQ1_9STRA)

HSP 1 Score: 105 bits (263), Expect = 6.180e-23
Identity = 54/145 (37.24%), Postives = 79/145 (54.48%), Query Frame = 0
Query:  261 DLTRSAHAGILNMIIGKRAEVDGVFTPRWYNLLDNVNEERTLPVAFGKALAASMVYSPFANGLFLAGARALRYGPKAR---FNWAEWRRQLMVCTVRDFEMWPPLHVLSFWLLPKHWRPLTSHVVGVALLAVISSTGLTDAGLPL 402
            D+ R    G+L M I      DGV TPRWY +L+  +  + LPV   K +A+S++Y PFANG+FLAG   LRYG       F+W  WRRQL++ T+RD ++  P    +  L+P  ++PL      +    V+S     +  LP+
Sbjct:    6 DVRRMVDVGLLTMAI------DGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPM 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1213.1351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JL38_9PHAE4.090e-10166.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF3_ECTSI1.970e-6174.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UZM4_9STRA8.700e-4342.41Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YIQ1_9STRA6.180e-2337.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..126
NoneNo IPR availableCOILSCoilCoilcoord: 206..226
NoneNo IPR availablePANTHERPTHR11266:SF8MPV17-LIKE PROTEIN 2coord: 220..378
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 341..385
e-value: 1.1E-4
score: 22.4
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 220..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1213contigH-paniculata_contig1213:11203..16709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1213.1351.1mRNA_H-paniculata_contig1213.1351.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1213 10986..17954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1213.1351.1 ID=prot_H-paniculata_contig1213.1351.1|Name=mRNA_H-paniculata_contig1213.1351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=446bp
MKKIGQKVTKQRDNSTYPPPPHDLHPPRVRNIFCVLVPPSTAVFCMPPSA
EATEEEDSIDGTSPTTATTAEDQASSTAQTIATAAAGEAEKDNTAQNGGE
VDGATAAAAAEEVESAREQASEAAGADAAAAAATAGDLENNIDEIAAAGQ
GLEERTEEVLLEKTGNGVGDGDIEASDGEESGSGSTYDSDVDRAWMEFEG
RGEGRLKAAEGSLKGALRSYDKLLREHYLKMSFVQATALGVVGDSIAQHL
ERRWYPGQRFDLTRSAHAGILNMIIGKRAEVDGVFTPRWYNLLDNVNEER
TLPVAFGKALAASMVYSPFANGLFLAGARALRYGPKARFNWAEWRRQLMV
CTVRDFEMWPPLHVLSFWLLPKHWRPLTSHVVGVALLAVISSTGLTDAGL
PLGQRAVPLLMRWARVAADAIVDRVRSKDRRAAAGAPRPLRGSVQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22