prot_H-paniculata_contig12044.1301.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12044.1301.1
Unique Nameprot_H-paniculata_contig12044.1301.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
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BLAST of mRNA_H-paniculata_contig12044.1301.1 vs. uniprot
Match: A0A6H5KPQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ2_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.480e-10
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:   21 PSVEVAQPKVRGNIIAGSLIGATFARSFGADGMWEGTVVK 60
            P +E++ P VRG++IAG LIGATFA++FG DGMWEGTV K
Sbjct:  103 PLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTK 142
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BLAST of mRNA_H-paniculata_contig12044.1301.1 vs. uniprot
Match: D8LS02_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS02_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.800e-9
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:   21 PSVEVAQPKVRGNIIAGSLIGATFARSFGADGMWEGTVVK 60
            P +E++ P VRG++IAG LIGATFA++FG DGMWEGTV K
Sbjct:  204 PLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTK 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12044.1301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPQ2_9PHAE2.480e-1067.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS02_ECTSI1.800e-967.50Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12044contigH-paniculata_contig12044:301..1298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12044.1301.1mRNA_H-paniculata_contig12044.1301.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12044 301..1298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12044.1301.1 ID=prot_H-paniculata_contig12044.1301.1|Name=mRNA_H-paniculata_contig12044.1301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
EIVPTTAAAVGDMQAYGLLAPSVEVAQPKVRGNIIAGSLIGATFARSFGA
DGMWEGTVVK
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