prot_H-paniculata_contig12.1275.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12.1275.1
Unique Nameprot_H-paniculata_contig12.1275.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length385
Homology
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: D7G6C1_ECTSI (RanBD1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C1_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 3.230e-48
Identity = 146/380 (38.42%), Postives = 202/380 (53.16%), Query Frame = 0
Query:   30 RSVRAPFGEGTTAAKGTRLNKHFATWLSHSVEANSACSLEHGLRDYIAYAAEIRLRVELSTDDTAPQASTAFKHPSMPSAAV-----ASKAAETPLLAVASTASASASPVXXXXXXXXXXXXXXXXEXXAPAPLVPAAAPAPTLPA------------------FSFASPSTLPPVSAPSGKFLFSLPSAPSSTAPVGGIPSGDLLRRFPLNPPASRGVSFKTPAAQTPFRGFQLPSGGAIAPP----APAAEPDEEAMPKEDPSKLQRAQGEELEEILHEVRAKLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNVSATKNTIKFIANVVDVGPSTLMIKVKPDALPPLHKKVLKQLP 382
            R V   FGEG TA +G RLNK F +W+S+ + A     L+ G+R+Y A AAEIR R   +  +    ++TAF HP   +AAV       K +E  + ++A+ AS S +                      P+   PA+APAP + +                            P    +   L S+  AP +T+P+GG         F  +      V     A    F GF++PSG AI PP    + AA+ +E+ MPKEDPSKL+RA GEE EE++   RAKLFRFK ++ TW DMG+G+LRLM+H TN++ RL+LRNDMGKVLLN A+Y GM+V+  K  IKF ANV D G ++ M+KV  D +  LH +V+  +P
Sbjct:  164 RWVGGAFGEGKTAVQGARLNKRFLSWVSNHL-AEGELFLDSGMREYAACAAEIRDRANHA--EAGAVSTTAFLHPRGSAAAVPPPQTVQKPSEDSI-SMAAEASVSTA---------------------TPSVTAPASAPAPDVKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPGSTPGALTSV--APPATSPLGG---------FKFDGGGLGAVGSSAGA----FNGFKVPSGVAIPPPVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRAKLFRFKMEDKTWGDMGVGMLRLMKHTTNDSRRLVLRNDMGKVLLNAAVYKGMSVTRAKKMIKFAANVGD-GLTSFMVKVTADEVDDLHTRVVGLVP 502          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: A0A836CJC8_9STRA (RanBD1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.790e-13
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 0
Query:  259 EAMPKEDPSKLQRAQGEEL-EEILHEVRAKLFRF--KKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNVS--ATKNTIKFIANVVDVGP-STLMIKVKPDALPPLHKKVLKQLPS 383
            E M K  P++L R + EE  EE LHEVRAKLF+   K  E    D+G+GVLRL +H+  +  R+++RND+GKV+LN  +YAGM     A  + +KF A     G  +   ++VK   L  L  K+   +PS
Sbjct:  513 EEMEKLKPAELGRNEDEEAQEETLHEVRAKLFKLDTKDGEKANVDLGVGVLRLTKHRATDLRRMVMRNDIGKVMLNAQVYAGMKFKGDARSSAVKFTAPQESSGELAVYTLRVKKGGLTELMDKLQSMVPS 643          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: A0A067BM64_SAPPC (RanBD1 domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BM64_SAPPC)

HSP 1 Score: 77.8 bits (190), Expect = 2.790e-12
Identity = 47/143 (32.87%), Postives = 84/143 (58.74%), Query Frame = 0
Query:  239 FQLPSGGAIAPPAPAAEPDE--EAMPKEDPSKLQRAQGEELEEILHEVRA-KLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNVSATKNTIKFIANVVDVG-PSTLMIKVKPDALPPLHKKV 377
            F LP       PAPAA  DE  E + +E+ + + ++  E  E +L+EV A ++  FK DE  W+D+G    +++++KT  ASR++ RN +GK+++N ALY G+ V+ T N    +  ++  G P+++++ +  D +  L  K+
Sbjct:  188 FNLPKAA----PAPAATEDEDDENIGREEATVIIKSSSEADETVLYEVDAIRIRHFKTDEKRWADIGRHPFKILQNKTTKASRILSRNSIGKIVINAALYKGLEVTVTSNKKSVMLTLLHDGEPTSMLLGIAADRVEELKAKI 326          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: UPI0020071E23 (uncharacterized protein n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI0020071E23)

HSP 1 Score: 79.0 bits (193), Expect = 3.270e-12
Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 0
Query:  273 QGEELEEILHEVRAKLFRFKKDEN---TWSDMGIGVLRLMEHKTNNASRLILRND-MGKVLLNVALYAGMNVSATKNTIKFIAN 352
            +GE+ EE +HE++ K+FR   D++   TWSD+G+GVLRL   K  +A R++LRN   GK+ +N  +Y+GMN S  KN + F+ +
Sbjct:  529 EGEQGEETVHEIKTKVFRMSADKDGNPTWSDLGVGVLRLKRDKETDARRMLLRNSGTGKITINFRIYSGMNASVAKNVVSFMGH 612          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: A0A662X9V3_9STRA (RanBD1 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9V3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.310e-11
Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 0
Query:  194 PSAPSSTAPVGGIPSGDLLRRFP---LNPPASRGVSFKTPAAQTPFRGFQLPSGGAIAPPAPAAEPDEEAMPKEDPSKLQRAQGEELEEILHEVRAKLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNV-----SATKNTIKFIANVVDVGPSTLMIKV 365
            PSA ++ +P GG   G+L    P     PPA  G+   +  A  P     +PS  A      A + DEE + +E+ + + +A   + E      +AK+F FK DE  W+D G+  L+++ +K   ++R+++RN++GK++LN +LY G+ V        K  +     V D   +  ++KV
Sbjct:  410 PSA-AAASPSGGFSFGNLTAPKPSTMATPPAFSGLKPFSFGASAPAASTAVPSSAA------AQDEDEETVGREEATVILKADAPDDECTFEAEKAKVFEFKNDEKRWADKGVHPLKVLVNKETKSARILVRNEIGKIVLNSSLYKGLTVRPHEVKGKKTGVTLALQVEDGSMAQFLLKV 582          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: A0A507FGI1_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FGI1_9FUNG)

HSP 1 Score: 72.4 bits (176), Expect = 5.070e-10
Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 0
Query:  255 EPDEEAMPKE---DPSKLQRAQGEELEEILHEVRAKLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRND-MGKVLLNVALYAGMNVSATKNTIKFIANVVDVGP----STLMIKVK 366
            E D+E  PK+   D + L R  GEE E  +HEVR K +  +K +  W D+G+G+L+L  H+    SRLILR D  G+VLLN+A++ GMN+ A  N+       + VG     S  +I+VK
Sbjct:  758 EDDDEDAPKDEQIDSAILMRGAGEEGERTVHEVRCKAYVLRKAK--WDDVGLGLLKLNTHRDTGKSRLILRADGSGRVLLNLAVFEGMNMKAEPNSGGKAVGFMGVGDGGALSKYLIRVK 875          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: A0A329S328_9STRA (RanBD1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S328_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.320e-10
Identity = 44/146 (30.14%), Postives = 74/146 (50.68%), Query Frame = 0
Query:  195 SAPSSTAPVGGIPSGDLLRRFPLNPPASRGVSFKTPAAQTPFRGFQLPSGGAIAPPAPAAEPDEEAMPKEDPSKLQRAQGEELEEILHEVRAKLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNV 340
            S  SST   GG   G+L       P    G SF +             S      PA   + +EE + +E+ + + +A   + +      +AK+F FKKDE  W+D G+  L+++  K   ++R+++RN++GK++LN ALY GM++
Sbjct:  314 STTSSTPATGGFSFGNLSAPKSTTPAPXXGFSFGS-------------SAXXXXXPAATGDDEEENIGREEATVIIKADSPDDDCTFEAEKAKIFEFKKDEKRWADKGVHPLKVLVSKETKSARILVRNEIGKIVLNSALYKGMSI 446          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: S3CQF7_GLAL2 (PH n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3CQF7_GLAL2)

HSP 1 Score: 72.0 bits (175), Expect = 7.970e-10
Identity = 43/114 (37.72%), Postives = 72/114 (63.16%), Query Frame = 0
Query:  254 AEPDEEAMPKEDPSKLQRAQGEELEEILHEVRAKLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNVSATKNTIKFIANVVD-VGPSTLMIKVK 366
            A+PD E   + D S  ++A GEE E+ L E+RAK  ++  D N WS  G G+LR+++H   N +R+++R D+G ++LN +L +G++  AT+ T+K +    D  G  T +++VK
Sbjct: 1617 ADPDAEKHAQLDLS--EQAPGEEDEKRLFEIRAKASKY--DNNAWSTKGTGLLRVLKHNDTNNTRILIRTDIGNIVLNKSLLSGVDYVATQKTVKLMTASEDGKGLETWILQVK 1726          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: W2KID0_PHYPR (RanBD1 domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2KID0_PHYPR)

HSP 1 Score: 71.2 bits (173), Expect = 8.270e-10
Identity = 46/146 (31.51%), Postives = 77/146 (52.74%), Query Frame = 0
Query:  195 SAPSSTAPVGGIPSGDLLRRFPLNPPASRGVSFKTPAAQTPFRGFQLPSGGAIAPPAPAAEPDEEAMPKEDPSKLQRAQGEELEEILHEVRAKLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNV 340
            SA SST   GG   G+L       P  + G SF          G   P+  + +    AA  DEE + +E+ + + +A   + +      +AK+F FKKDE  W+D G+  L+++  +   ++R+++RN++GK++LN ALY GM +
Sbjct:  303 SATSSTPATGGFSFGNLTAPKSAAPAPTGGFSF----------GASAPAATSAS--TAAAVEDEENIGREEATVIIKADSPDDDCTFEADKAKIFEFKKDEKRWADKGVHPLKVLVSQETKSARILVRNEIGKIVLNSALYKGMAI 436          
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Match: K3WSW0_GLOUD (RanBD1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSW0_GLOUD)

HSP 1 Score: 65.1 bits (157), Expect = 2.060e-9
Identity = 31/90 (34.44%), Postives = 57/90 (63.33%), Query Frame = 0
Query:  280 ILHEVRAKLFRFKKDENTWSDMGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNVSAT----KNTIKFIANVVDVGPSTLMIKV 365
            +    +AK+F FKKDE  W+D G+  L+++ +K +  +R+++RN++GK++LN +LY GM++ A     K T   ++  VD   +  ++KV
Sbjct:    9 VFDAEKAKVFEFKKDEKRWADKGLHPLKVLVNKDSKKARILVRNEIGKIVLNSSLYKGMSIKAHETKGKKTGVIVSLQVDGAMTQYLLKV 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12.1275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C1_ECTSI3.230e-4838.42RanBD1 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A836CJC8_9STRA1.790e-1341.22RanBD1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A067BM64_SAPPC2.790e-1232.87RanBD1 domain-containing protein (Fragment) n=1 Ta... [more]
UPI0020071E233.270e-1244.05uncharacterized protein n=1 Tax=Epithele typhae Ta... [more]
A0A662X9V3_9STRA1.310e-1129.44RanBD1 domain-containing protein n=1 Tax=Nothophyt... [more]
A0A507FGI1_9FUNG5.070e-1040.83Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
A0A329S328_9STRA6.320e-1030.14RanBD1 domain-containing protein n=2 Tax=Phytophth... [more]
S3CQF7_GLAL27.970e-1037.72PH n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / ... [more]
W2KID0_PHYPR8.270e-1031.51RanBD1 domain-containing protein n=8 Tax=Phytophth... [more]
K3WSW0_GLOUD2.060e-934.44RanBD1 domain-containing protein n=1 Tax=Globispor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainSMARTSM00160ranbd_3coord: 263..381
e-value: 1.1E-9
score: 46.6
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 273..345
e-value: 1.1E-15
score: 58.0
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 258..341
score: 14.714
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 218..382
e-value: 3.0E-28
score: 100.9
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 47..366
NoneNo IPR availablePANTHERPTHR23138:SF141NUCLEAR PORE COMPLEX PROTEIN NUP50coord: 47..366
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 266..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12contigH-paniculata_contig12:43522..45835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12.1275.1mRNA_H-paniculata_contig12.1275.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12 42471..46749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12.1275.1 ID=prot_H-paniculata_contig12.1275.1|Name=mRNA_H-paniculata_contig12.1275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=385bp
MSNAVVKAPNGLHMESGETAFAVATKVVTRSVRAPFGEGTTAAKGTRLNK
HFATWLSHSVEANSACSLEHGLRDYIAYAAEIRLRVELSTDDTAPQASTA
FKHPSMPSAAVASKAAETPLLAVASTASASASPVSATPAPSPPLAAPPAL
ETPAPAPLVPAAAPAPTLPAFSFASPSTLPPVSAPSGKFLFSLPSAPSST
APVGGIPSGDLLRRFPLNPPASRGVSFKTPAAQTPFRGFQLPSGGAIAPP
APAAEPDEEAMPKEDPSKLQRAQGEELEEILHEVRAKLFRFKKDENTWSD
MGIGVLRLMEHKTNNASRLILRNDMGKVLLNVALYAGMNVSATKNTIKFI
ANVVDVGPSTLMIKVKPDALPPLHKKVLKQLPSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf