prot_H-paniculata_contig11994.1263.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11994.1263.1
Unique Nameprot_H-paniculata_contig11994.1263.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length324
Homology
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: D7G3B8_ECTSI (DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B8_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 5.190e-163
Identity = 254/333 (76.28%), Postives = 277/333 (83.18%), Query Frame = 0
Query:    1 MDTLVDAGLVPDTSKWKYPPSPDNPRIRVDRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEV----------------DATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            MDTLVDAGLVPDTSKWKY PSP++ R RVDRFRGRLVVPIRDHRG VIGFGARDLSDSQA  G+VGSGFVIP  +KK K K      E                     G GA A + +KK RPPAKYLNSPET+LFKKGKNVFGLDLAKEA+RS+D A VVEGYFDVIKLHDAG+R AVGVLGTAITIDQLQLCARY+KSKRV+LCMDGD AG RAVERLCE+PA+SGLDSLSEAGVSVSVA+IP D GCKDPADFLQAHGAE FR +V+G+A+PW+DWYGD IL +H DFA DANAFRRCTDRLTGF+SDLSIP+DQTFHVHRFAKALA G
Sbjct:  369 MDTLVDAGLVPDTSKWKYRPSPNDARGRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQ-GSVGSGFVIPDVSKKGKAKKKGEQTEAAAXXXXXXXXXXXXAGGKGVGEGADAGKWEKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAMRSEDTAFVVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDPGCKDPADFLQAHGAEEFRAKVMGKAVPWSDWYGDSILADH-DFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGG 699          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: A0A6H5K157_9PHAE (Toprim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K157_9PHAE)

HSP 1 Score: 474 bits (1220), Expect = 3.590e-154
Identity = 252/373 (67.56%), Postives = 277/373 (74.26%), Query Frame = 0
Query:    1 MDTLVDAGLVPDTSKWKYPPSPDNPRIRVDRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDAT--------------------------------------------------------GAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            MDTLVDAGLVPDTSKWKY PSP++ R RVDRFRGRLVVPIRDHRG VIGFGARDLSDSQA  G+VGSGFVIP+ + K K K      E   A                                                         G GA A + +KK RPPAKYLNSPET+LFKKGKNVFGLDLAKEA+RS+D A VVEGYFDVIKLHDAG+R AVGVLGTAITIDQLQLCARY+KSKRV+LCMDGD AG RAVERLCE+PA+SGLDSLSEAGVSVSVA+IP DSGCKDPADFLQAHGAE FR +V+ +A+PW+ WYGD IL +H DFA+DANAFRRCTDRL GF+SDLSIP+DQTFHVHRFAKALA G
Sbjct:  163 MDTLVDAGLVPDTSKWKYRPSPNDARGRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQ-GSVGSGFVIPEVSNKGKAKKKGEQTEAAAAATGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGKGVGEGAVAGKWEKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAMRSEDTAFVVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSVWYGDSILADH-DFASDANAFRRCTDRLAGFMSDLSIPTDQTFHVHRFAKALAGG 533          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: A0A835YIS2_9STRA (Toprim domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS2_9STRA)

HSP 1 Score: 233 bits (593), Expect = 3.770e-69
Identity = 134/288 (46.53%), Postives = 166/288 (57.64%), Query Frame = 0
Query:   29 VDRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDS-GCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALA 315
            +DRFRGRL+VPIRD RG+V+ FG R+L                                                  +R   KYLNSPET +F KG  +FGLD A++AIR +DMAV+VEGYFDVI LH AGVR AVG LGTA+T  QL L AR+S+ +RVVLCMD D AG +AVERLCE  A   L+  +  G+ V VA I   + GCKDP+DF+    A        G   PWT WY D++L  H D   DA AFR C D+LT F+S L+ P+D+T HV+R A AL+
Sbjct:  219 LDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXX-------------------------VRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGA---LEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAPWTVWYTDRVLAAH-DHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALS 477          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: A0A7S3Y9A4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9A4_HETAK)

HSP 1 Score: 215 bits (547), Expect = 7.740e-65
Identity = 130/289 (44.98%), Postives = 168/289 (58.13%), Query Frame = 0
Query:   29 VDRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            +DRFRGRL+VPIRD  G V+GFGAR L+D Q             KP                                    KYLNSPE  +F KG+ +FGLD AK A R +   ++VEGYFDVI LH   + NAVGVLG+AIT + L+  A+ +K KRVVL MD D AG  AV  LC   A+  L +L+E GVSV VA++  D+  KDPA+FL A  AE +R Q+I +A  W++WYGD +L E+   A D  +FRR  + LT F++ L   +D+TFH +RFAK LA+G
Sbjct:   13 IDRFRGRLMVPIRDGAGEVVGFGARSLTDGQ-------------KP------------------------------------KYLNSPEGPVFSKGRTLFGLDAAKAAARERGEVILVEGYFDVIALHSQNITNAVGVLGSAITDENLRAAAKLTKDKRVVLNMDADAAGAGAVAGLC---ASGRLLALAEEGVSVKVATMAGDA--KDPAEFLIAQSAEEYRSQIIEKAQVWSEWYGDYLLSEYE--ADDPESFRRVVNSLTAFLATLPA-ADRTFHCYRFAKKLANG 244          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: A0A8J6SNQ8_9CYAN (DNA primase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SNQ8_9CYAN)

HSP 1 Score: 171 bits (434), Expect = 6.790e-45
Identity = 110/288 (38.19%), Postives = 150/288 (52.08%), Query Frame = 0
Query:   30 DRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            DRFR RL++PI D +G VIGFG R LSD Q                                                   KYLNSPET LF KGK +FGLD A+ AI  QD AVVVEGYFDVI LH AG+ N V  LGTA+++ Q++L  RY++SK+VVL  D D AG +A ER     A    D   +  V + V + P+    KDP +FLQ+H A+ +R  ++ EA  W DW   Q+L +     + A+ F++ T  +   + +L   + +T ++HR A+ L+ G
Sbjct:  204 DRFRDRLMIPIHDLQGRVIGFGGRTLSDEQP--------------------------------------------------KYLNSPETELFDKGKTLFGLDKARGAIAKQDCAVVVEGYFDVIALHAAGINNVVASLGTALSLVQVRLLLRYTESKQVVLNFDADAAGAKAAERAIGEVA----DLAYKGEVQLRVLNTPQG---KDPDEFLQSHSADDYRA-LLAEAPLWLDWQIQQLLADAD--LSKADQFQQSTQAIVKLLGNLPNATLRTHYIHRCAELLSRG 431          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: A0A1Z4JEI4_LEPBY (DNA primase n=2 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JEI4_LEPBY)

HSP 1 Score: 168 bits (425), Expect = 1.120e-43
Identity = 108/288 (37.50%), Postives = 146/288 (50.69%), Query Frame = 0
Query:   30 DRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            DRFR RL+VPI+D +G VIGFG R L+D Q                                                   KYLNSPET LF KG+ +FGLD AK AI  QD AVVVEGYFDVI LH AGV NAV  LGTA++I Q++   RY++SKRVV   D D AG +A ER     AT       +  V + V ++P     KDP DFL+ H A+A++  ++  A  W DW  +Q +         ++ F++    +   + +L  PS +T ++H  ++ L+ G
Sbjct:  204 DRFRNRLMVPIQDSQGRVIGFGGRTLTDEQP--------------------------------------------------KYLNSPETELFDKGRTLFGLDKAKSAIAKQDQAVVVEGYFDVIALHAAGVTNAVASLGTALSIAQVKQLLRYTESKRVVFNFDADRAGVQAAERAIGEVATLAY----QGEVQLRVLNLPDG---KDPDDFLKNHSAKAYQ-DLLDHAPLWLDWQINQAISNQD--LKQSDQFQQAVMAIVALLGNLPNPSLRTHYIHHCSELLSQG 431          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: K8GMC4_9CYAN (DNA primase n=2 Tax=Leptolyngbyaceae cyanobacterium JSC-12 TaxID=864702 RepID=K8GMC4_9CYAN)

HSP 1 Score: 166 bits (420), Expect = 8.100e-43
Identity = 105/289 (36.33%), Postives = 151/289 (52.25%), Query Frame = 0
Query:   30 DRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAG-VSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            DRFR RL++PI D +G V+GFG R L+D Q                                                   KYLNSPET LF KGK +FGLD A+ AI  QD AVVVEGYFDVI LHDAG+ N V  +GTA++  Q++   RY++SKR+VL  D D+AG++A ER     A S ++ L+  G + + V +IP     KDP +FL++H A  ++ +++  A  W DW  ++ + E     AD   F+     +   + +L   + +T ++HR A+ L+ G
Sbjct:  235 DRFRDRLMIPIHDLQGRVVGFGGRTLTDEQP--------------------------------------------------KYLNSPETELFDKGKLLFGLDKARAAIAKQDQAVVVEGYFDVIALHDAGITNVVASMGTALSSAQVRQLLRYTESKRIVLNFDADNAGNQAAER-----AVSEVEMLAYRGDIQLRVLNIPAG---KDPDEFLKSHSAAEYQ-ELVDTAPLWLDWQIERAIAERDPKQADQ--FQTMVQAMVKLLGNLPSATLRTHYIHRCAERLSQG 462          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: UPI001682F21C (DNA primase n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001682F21C)

HSP 1 Score: 164 bits (415), Expect = 3.720e-42
Identity = 106/288 (36.81%), Postives = 144/288 (50.00%), Query Frame = 0
Query:   30 DRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            DRFR RL++PIRD +  VIGFG R L D               KP                                    KYLNSP+T LF KGK ++GLD+AK AI   D A+VVEGYFDVI LH AG  NAV  LGTA+   Q++L  RY++SK+++L  D D AG +A ER     AT  L       V + V +IP     KDP +FLQ H AE +R  ++  A  W DW   Q+LK+       A+ F++ T  +   +S+++    +T ++   A+  + G
Sbjct:  204 DRFRDRLMIPIRDAQSRVIGFGGRSLGDE--------------KP------------------------------------KYLNSPDTELFDKGKMLYGLDMAKAAIAKDDRAIVVEGYFDVIALHAAGFANAVAALGTALNAAQVRLLLRYTESKQILLNFDADAAGVKAAERAIGEVATMAL----RGDVQLRVLNIPEG---KDPDEFLQTHVAEEYRA-LLDAAPLWIDWQIQQVLKDRD--LRQADQFQQTTQDIVTVLSEIANADTRTHYIRHCAEIFSHG 431          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: A0A7C3VI04_9CYAN (DNA primase n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3VI04_9CYAN)

HSP 1 Score: 162 bits (411), Expect = 1.170e-41
Identity = 107/288 (37.15%), Postives = 149/288 (51.74%), Query Frame = 0
Query:   30 DRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            D FR R+++PI D RG +IGFG R        +G V                      +E D++     A +E       AKYLNSPET LF KGK +F LD AK AI  +D AVVVEGYFD I LH  G++NAV  LGTAI+I Q++   RYS+SK++VL  D D AG +A  R     A    D   +  V++ +  IP     KD  ++L+  GA A   Q++  A  W DW  +QIL   G     A+ +++    +   + D+     +T++V+R A+ LA G
Sbjct:  200 DIFRNRIIIPIHDDRGRIIGFGGRLQPPHHLGLGEV----------------------QEADSS-----AIKE-------AKYLNSPETQLFDKGKTLFALDKAKAAITKEDRAVVVEGYFDAIALHAHGIQNAVATLGTAISITQVRQLLRYSESKQIVLNFDADAAGTKAANRAIGEIA----DLAYKGEVNLRILGIPEG---KDADEYLKTPGAAASYRQLLEAAPLWLDWQIEQILL--GKNLKQADQYQQVARAMVALLKDIQHSDTRTYYVNRCAEFLAMG 444          
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Match: A0A0S3U313_9CYAN (DNA primase n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A0S3U313_9CYAN)

HSP 1 Score: 162 bits (410), Expect = 1.430e-41
Identity = 107/289 (37.02%), Postives = 147/289 (50.87%), Query Frame = 0
Query:   30 DRFRGRLVVPIRDHRGSVIGFGARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAAREDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYFDVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHRAVERLCENPATSGLDSLSEAG-VSVSVASIPRDSGCKDPADFLQAHGAEAFRIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIPSDQTFHVHRFAKALADG 317
            DRFR RL+VPI D +G VIGFG R LSD Q                                                   KYLNSPET LF KGK +FGLD AK AI  QD AVVVEGYFDVI LH AGV NAV  LGTA+++ Q++   RY++SKRVV   D D AG +A ER     A   + +L+  G V + + +IP     KDP D+L+ H A+ ++  ++  +  W DW  +Q +         ++ F++    +   + +L  P+ +T ++H  A+ L+ G
Sbjct:  204 DRFRNRLMVPIHDSQGRVIGFGGRTLSDEQP--------------------------------------------------KYLNSPETDLFDKGKTLFGLDKAKGAIAKQDQAVVVEGYFDVIALHAAGVTNAVASLGTALSVAQVKQLLRYTESKRVVFNFDADRAGVQAAER-----AIGEIANLAYQGEVQLRILNIPDG---KDPDDYLKNHPAQDYQ-NLLDRSPLWLDWQIEQAILNQD--LKQSDQFQQAVTAIVSLLGNLPNPALRTHYIHYCAELLSQG 431          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11994.1263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3B8_ECTSI5.190e-16376.28DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K157_9PHAE3.590e-15467.56Toprim domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YIS2_9STRA3.770e-6946.53Toprim domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S3Y9A4_HETAK7.740e-6544.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J6SNQ8_9CYAN6.790e-4538.19DNA primase n=4 Tax=Cyanobacteria TaxID=1117 RepID... [more]
A0A1Z4JEI4_LEPBY1.120e-4337.50DNA primase n=2 Tax=Leptolyngbya TaxID=47251 RepID... [more]
K8GMC4_9CYAN8.100e-4336.33DNA primase n=2 Tax=Leptolyngbyaceae cyanobacteriu... [more]
UPI001682F21C3.720e-4236.81DNA primase n=1 Tax=Pseudanabaena sp. FACHB-2040 T... [more]
A0A7C3VI04_9CYAN1.170e-4137.15DNA primase n=2 Tax=Oscillatoriales TaxID=1150 Rep... [more]
A0A0S3U313_9CYAN1.430e-4137.02DNA primase n=6 Tax=Cyanobacteria TaxID=1117 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006171TOPRIM domainSMARTSM00493toprim5coord: 141..214
e-value: 6.3E-9
score: 45.7
IPR006171TOPRIM domainPFAMPF13662Toprim_4coord: 143..225
e-value: 2.7E-17
score: 63.0
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 141..230
score: 13.421
IPR013264DNA primase, catalytic core, N-terminalPFAMPF08275Toprim_Ncoord: 109..133
e-value: 6.3E-6
score: 26.3
coord: 28..59
e-value: 1.0E-7
score: 32.0
IPR037068DNA primase, catalytic core, N-terminal domain superfamilyGENE3D3.90.980.10coord: 1..65
e-value: 6.4E-9
score: 37.6
NoneNo IPR availableGENE3D3.40.1360.10coord: 123..256
e-value: 1.3E-35
score: 124.2
NoneNo IPR availablePANTHERPTHR30313DNA PRIMASEcoord: 102..314
coord: 29..58
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 26..60
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 109..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11994contigH-paniculata_contig11994:563..7389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11994.1263.1mRNA_H-paniculata_contig11994.1263.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11994 563..7404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11994.1263.1 ID=prot_H-paniculata_contig11994.1263.1|Name=mRNA_H-paniculata_contig11994.1263.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
MDTLVDAGLVPDTSKWKYPPSPDNPRIRVDRFRGRLVVPIRDHRGSVIGF
GARDLSDSQASIGNVGSGFVIPKPTKKSKLKGNKALVEEVDATGAGAGAA
REDKKIRPPAKYLNSPETSLFKKGKNVFGLDLAKEAIRSQDMAVVVEGYF
DVIKLHDAGVRNAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDDAGHR
AVERLCENPATSGLDSLSEAGVSVSVASIPRDSGCKDPADFLQAHGAEAF
RIQVIGEAMPWTDWYGDQILKEHGDFAADANAFRRCTDRLTGFISDLSIP
SDQTFHVHRFAKALADGMWWRWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006171TOPRIM_domain
IPR013264DNA_primase_core_N
IPR037068DNA_primase_core_N_sf