prot_H-paniculata_contig11984.1257.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11984.1257.1
Unique Nameprot_H-paniculata_contig11984.1257.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length323
Homology
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: D7FK64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK64_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 1.950e-76
Identity = 186/330 (56.36%), Postives = 206/330 (62.42%), Query Frame = 0
Query:    5 GDNLRFREHRKLISGRMSGRNRPEQLD----GGADAGPTTTSSTVGLDDIDM-MDVDEEGAALXXXXXXXXXXXXXVPPLRGWAEEVEAEEERKGLEMEWWDEAFLTKETRDQKAEGKLEPQQRNIESLYALLQLENAKTFKYVQHPTKP-------ETGPREGGDGDSGVXXXXXXXXXXXXXXXXXXKVYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMCT 322
            GDNLRFREHRK +SGRMSGR   EQLD    GG+  GPT  +S++ +                XXXXXXXXXX   VP LR   +++E        E+EWWDEAFLTKETRD KA GKLE +    ++LY +L LENAKTFKY+QHP KP                     XXXXXXXXXX        KVYL                                     MSNFMQVLGDQAVVDPSKVEALVMGQV RRK EHEARNQAAKLTPQEKRDK+KRKLLEDTSKE+QVAV+RV+DMSDPK+RFKVD NA QRYLTGGVVMCT
Sbjct:  229 GDNLRFREHRKFLSGRMSGRVNAEQLDTPAGGGSGGGPTAGTSSLSVYSAQAEAXXXXXXXXXXXXXXXXXXXAEAVPALREVGQDLE--------EIEWWDEAFLTKETRDAKAAGKLEAEACTTDALYPVLLLENAKTFKYIQHPKKPLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSDAAAMKVYLTKKERKRIRRTTRMEREREKQDKIALGLLPTPEPKMSMSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCT 550          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A6H5K0L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L2_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 9.800e-49
Identity = 91/100 (91.00%), Postives = 96/100 (96.00%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMCT 322
            MSNFMQVLGDQAVVDPSKVEALVMGQV RRK EHEARNQAAKLTPQEKRDK+KRKLLEDTSKE+QVAV+RV+DMSDPK+RFKVD NA QRYLTGGVVMCT
Sbjct:   43 MSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCT 142          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A7S4D475_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D475_HETAK)

HSP 1 Score: 125 bits (314), Expect = 1.260e-31
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            +SNFM+V+G+QAV DPSKVE LV  QV  R+  HE RNQA KLTPQE++DKK++K +ED +    VAVFRV D+SDP+KRFKVD NA Q YLTGGV++C
Sbjct:   37 LSNFMKVIGEQAVADPSKVEKLVTAQVRARERNHEMRNQARKLTPQERKDKKRQKAMEDGAAGNHVAVFRVRDLSDPQKRFKVDVNAQQHYLTGGVLLC 135          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A7S2RZ89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ89_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.880e-26
Identity = 103/324 (31.79%), Postives = 142/324 (43.83%), Query Frame = 0
Query:    4 QGDNLRFREHRKLISGRMSGRNRPEQLDGGADAGPTTTSSTVGLDDIDMMDVDEEGAALXXXXXXXXXXXXXVPPLRGWAEEVEAEEERKGLEMEWWDEAFLTKETRDQKAEGKLEPQQRNIESLYALLQLENAKTFKYVQHP--TKP----ETGPREGGDGDSGVXXXXXXXXXXXXXXXXXXKVYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            Q D L+ RE +K+ +G  SGRN+   +  G    P       G D ++      + + L              P     A  +  + +     +EWWD AFL  + R            ++  + Y L +L N+K    V HP  TKP    E GP+                            V+L                                     ++NFM+VLGDQAV DPSK+E  VM QV +R   HE RN A KLTPQE++DKK+RKL EDTS+++ VAV+RV D+S+ + +FKVD NA Q  LTGGV+ C
Sbjct:  153 QDDLLQAREQKKMQAGFSSGRNQNAYVKVGMSDLPIEPEVVPGGDAVN------KASQLLDSEALPQLPEEASPVAPKPAASLVGQTQSVPHSVEWWDVAFLPSDKR------------KDAAAAYDLAKLTNSKFHALVVHPAPTKPLGYDEKGPQ--------------------------LPVFLTKKERKRIRRQAREERRNEMLDKIALGLMPAPEPKLKLANFMKVLGDQAVADPSKIEKKVMEQVQQRVMNHEMRNMAQKLTPQERKDKKRRKLTEDTSRQVVVAVYRVKDLSNQQHQFKVDMNAQQNSLTGGVLTC 432          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A7S2G0F4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0F4_9STRA)

HSP 1 Score: 115 bits (287), Expect = 9.120e-25
Identity = 61/99 (61.62%), Postives = 76/99 (76.77%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            ++NFM+VLGDQAV DPSK+E  VM QV  R   HE RNQA KLTP E+++KK++KL EDTS ++ VA+FRV DMSD + +FKVD NA Q  LTGGV+ C
Sbjct:  442 LANFMKVLGDQAVADPSKIERKVMEQVQARVMNHEMRNQARKLTPAERKEKKRKKLAEDTSLQVTVALFRVLDMSDKQLQFKVDMNAQQNNLTGGVLQC 540          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A7S1BTC7_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTC7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.400e-24
Identity = 61/99 (61.62%), Postives = 73/99 (73.74%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            +SNFM+VLGDQAV+DPSK+EA+ +GQ+  RK  HE  N    LTP+E+R KK RKLLEDTSK + VA+F V DMS P  R KVD NA Q  LTGGV+ C
Sbjct:  447 LSNFMKVLGDQAVLDPSKMEAVALGQMRNRKLRHEKMNAERALTPEERRAKKSRKLLEDTSKGLSVAIFYVMDMSHPYHRAKVDLNAQQNNLTGGVIEC 545          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A5D6XZ83_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ83_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.820e-23
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            +SN M+VL DQAV DPS +E  V  QVA+R+  HE RN A KLTP+E+R+KK RK+ ED + ++ VAVFRV D+S+P+ RFKVD NA Q +LTGGV++C
Sbjct:  413 LSNMMRVLADQAVADPSAIERKVREQVAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFRVPDLSNPQHRFKVDVNAQQYHLTGGVLIC 511          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A2D4CF61_PYTIN (U4/U6 small nuclear ribonucleoprotein Prp3, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF61_PYTIN)

HSP 1 Score: 110 bits (276), Expect = 2.080e-23
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            +SN M+VLG+QAV DPS VE  V  Q+A+R+  HE RN A KLTP+E+R+KK +K+ ED S ++  AVFRVSD+S+P+ RFKVD NA Q +LTGGV+ C
Sbjct:  362 LSNMMKVLGEQAVADPSAVERKVRQQMAQREKNHEMRNLARKLTPEERREKKLKKIKEDASGDIHAAVFRVSDLSNPQHRFKVDXNAQQFHLTGGVLCC 460          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A6A3TVC5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TVC5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.300e-23
Identity = 56/99 (56.57%), Postives = 77/99 (77.78%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            +SN M+VL +QAV DPS +E  V  Q+A+R+N HE RN A KLTP+E+R+KK RK+ ED + ++ VAVF+V D+S+P+ RFKVD NA Q +LTGGV++C
Sbjct:  420 LSNMMRVLSEQAVADPSAIERKVREQIAQRENNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFKVPDLSNPQHRFKVDVNAQQYHLTGGVLIC 518          
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Match: A0A1Y1ZMZ1_9FUNG (Pre-mRNA-splicing factor 3 n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1ZMZ1_9FUNG)

HSP 1 Score: 108 bits (269), Expect = 5.820e-23
Identity = 56/99 (56.57%), Postives = 80/99 (80.81%), Query Frame = 0
Query:  223 MSNFMQVLGDQAVVDPSKVEALVMGQVARRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPKKRFKVDKNATQRYLTGGVVMC 321
            +SN M+VLG++AV+DP+KVEA V  Q+  R++ H+  N+  KLT +E+R+K K+KL+EDTSK +QVAVF+V+D+SD +KR+KVD NA Q YLTG V++C
Sbjct:  189 ISNLMRVLGNEAVLDPTKVEAQVREQMKSRQDAHKKHNEEKKLTKEERREKLKKKLMEDTSKVVQVAVFKVNDLSDGQKRYKVDINAQQLYLTGIVIVC 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11984.1257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK64_ECTSI1.950e-7656.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0L2_9PHAE9.800e-4991.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4D475_HETAK1.260e-3164.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RZ89_9STRA2.880e-2631.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G0F4_9STRA9.120e-2561.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1BTC7_9STRA4.400e-2461.62Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A5D6XZ83_9STRA1.820e-2358.59Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4CF61_PYTIN2.080e-2358.59U4/U6 small nuclear ribonucleoprotein Prp3, putati... [more]
A0A6A3TVC5_9STRA3.300e-2356.57Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A1Y1ZMZ1_9FUNG5.820e-2356.57Pre-mRNA-splicing factor 3 n=1 Tax=Neocallimastix ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010541Domain of unknown function DUF1115PFAMPF06544DUF1115coord: 289..320
e-value: 3.0E-7
score: 30.7
IPR013881Pre-mRNA-splicing factor 3PFAMPF08572PRP3coord: 86..266
e-value: 2.0E-47
score: 161.8
IPR027104U4/U6 small nuclear ribonucleoprotein Prp3PANTHERPTHR14212U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATEDcoord: 61..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11984contigH-paniculata_contig11984:1804..7589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11984.1257.1mRNA_H-paniculata_contig11984.1257.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11984 1804..7589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11984.1257.1 ID=prot_H-paniculata_contig11984.1257.1|Name=mRNA_H-paniculata_contig11984.1257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=323bp
MAWQGDNLRFREHRKLISGRMSGRNRPEQLDGGADAGPTTTSSTVGLDDI
DMMDVDEEGAALAAAAAKRAAVAAAVPPLRGWAEEVEAEEERKGLEMEWW
DEAFLTKETRDQKAEGKLEPQQRNIESLYALLQLENAKTFKYVQHPTKPE
TGPREGGDGDSGVGGGEGDRAAGDGGAALAMKVYLTKKERKRIRRTTRME
REREKQDKIALGLMPAPEPKMKMSNFMQVLGDQAVVDPSKVEALVMGQVA
RRKNEHEARNQAAKLTPQEKRDKKKRKLLEDTSKEMQVAVFRVSDMSDPK
KRFKVDKNATQRYLTGGVVMCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010541DUF1115
IPR013881Pre-mRNA_splic_Prp3
IPR027104Prp3