prot_H-paniculata_contig11952.1243.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11952.1243.1
Unique Nameprot_H-paniculata_contig11952.1243.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length275
Homology
BLAST of mRNA_H-paniculata_contig11952.1243.1 vs. uniprot
Match: D7FVM5_ECTSI (Protein required for ethanol metabolism n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM5_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.820e-145
Identity = 196/270 (72.59%), Postives = 222/270 (82.22%), Query Frame = 0
Query:    3 GHKLCKWSWANRQCVPADLCQYKYQFLDATPSESCRSKVLTHKRKVFKNPDVEVKPAYAIAGAAGLFAGDLVAIRYTDWLKKAPLLFNIVQGFVLFVSGDTLFQVLEQGWQKMVGLKWWRAVRSGLIGALNNGLVHYSYYKWIDRRFPYHMFSEKRWGPPDGAKSRLAIGLTKWAIEWPTIGLYKIVSMYVLTAAMSRSMDTLLDRMQDGVLLTQLRGLQVWPIYDMILYAYVPTAHRPLFNSFMSILWGGYLSHVSQPK--ETEDDEVP 270
            G+ LC WSW  ++C PA LCQYKYQFLDAT SESCR       +  F+  DV+VKPA A+ GAAGLFA DL AIRYTDWLK+ PLLFN+VQGFVL  SGDTLFQVLEQGWQK++GLK+WR  RSG+IGALNNGLVHYSYYKWID RFPY  F+EKRWGP DGAKS+LA+G TKWA+EWPTIGLYKI SMYVLTA +S S   L +R+QD + LT +R LQVWPIYDMILYAYVPTAHRPLFNSFMSI WGGYLSHVSQP   + E+++VP
Sbjct:  123 GNALCSWSWKEKRCEPASLCQYKYQFLDATVSESCRQADFKVTKAAFEQADVQVKPAVALVGAAGLFAADLAAIRYTDWLKRYPLLFNVVQGFVLLASGDTLFQVLEQGWQKVIGLKFWRMARSGIIGALNNGLVHYSYYKWIDGRFPYDKFTEKRWGPKDGAKSKLAVGFTKWALEWPTIGLYKIASMYVLTAVLSGSTKGLWERLQDSLFLTWIRSLQVWPIYDMILYAYVPTAHRPLFNSFMSIAWGGYLSHVSQPHKGDGEEEDVP 392          
BLAST of mRNA_H-paniculata_contig11952.1243.1 vs. uniprot
Match: A0A836CEJ0_9STRA (Protein required for ethanol metabolism n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ0_9STRA)

HSP 1 Score: 327 bits (838), Expect = 5.900e-108
Identity = 156/268 (58.21%), Postives = 191/268 (71.27%), Query Frame = 0
Query:    7 CKWSWANRQCVPADLCQYKYQFLDATPSESCRSKVLTHKRKVFKNPDVEVKPAYAIAGAAGLFAGDLVAIRYTDWLKKAPLLFNIVQGFVLFVSGDTLFQVLEQGWQKMVGLKWWRAVRSGLIGALNNGLVHYSYYKWIDRRFPYHMFSEKRWGPPDGAKSRLAIGLTKWAIEWPTIGLYKIVSMYVLTAAMSRSMDTLLDRMQDGVLLTQLRGLQVWPIYDMILYAYVPTAHRPLFNSFMSILWGGYLSHVSQPKETEDDEVPEATA 274
            CK+SWA+++C P   C+YKYQFLDATPSESCR K +  K K   +    V PA A+ GA  LFA DL  I  T  LKKAPLL N+VQGF LF+SGDT FQV+EQGW   +G    RA ++G+IGALNNGLVH++YYKWIDR FPYH F+  RWGP DG K +L +  TK+ +EWPTIG+YKI S + LTA M+  +  L ++     +LT LR LQVWP+YD   YAY+PT HRPLFN+FMSI WGGYLSH+SQP E + +E  EA A
Sbjct:  126 CKFSWASKRCEPRAYCEYKYQFLDATPSESCRRKGVL-KAKHALHSGALVSPAAAVGGATALFAADLAVIATTPALKKAPLLTNVVQGFALFLSGDTYFQVIEQGWASKIGYSLARAAKAGVIGALNNGLVHFTYYKWIDRHFPYHKFTVDRWGPKDGTKYKLIVAWTKYWLEWPTIGVYKIASSFALTALMNNDLKALPEKFSKRFMLTWLRSLQVWPLYDTFAYAYIPTDHRPLFNTFMSIAWGGYLSHISQP-EAKVEETEEAAA 391          
BLAST of mRNA_H-paniculata_contig11952.1243.1 vs. uniprot
Match: A0A6H5JN17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN17_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 1.360e-98
Identity = 137/180 (76.11%), Postives = 155/180 (86.11%), Query Frame = 0
Query:   93 QGFVLFVSGDTLFQVLEQGWQKMVGLKWWRAVRSGLIGALNNGLVHYSYYKWIDRRFPYHMFSEKRWGPPDGAKSRLAIGLTKWAIEWPTIGLYKIVSMYVLTAAMSRSMDTLLDRMQDGVLLTQLRGLQVWPIYDMILYAYVPTAHRPLFNSFMSILWGGYLSHVSQPK--ETEDDEVP 270
            +GFVL  SGDTLFQVLEQGWQK++GLK+WR  RSG+IGALNNGLVHYSYYKWID RFPY  F+EKRWGP DGAKS+LA+G TKWA+EWPTIGLYKI SMYVLTA +S S   L +R+QD + LT +R LQVWPIYDMILYAYVPTAHRPLFNSFMSI WGGYLSHVSQP   + E+++VP
Sbjct:    4 KGFVLLASGDTLFQVLEQGWQKVIGLKFWRMARSGIIGALNNGLVHYSYYKWIDGRFPYDKFTEKRWGPKDGAKSKLAVGFTKWALEWPTIGLYKIASMYVLTAVLSGSTKGLWERVQDSLFLTWIRSLQVWPIYDMILYAYVPTAHRPLFNSFMSIAWGGYLSHVSQPHKGDGEEEDVP 183          
BLAST of mRNA_H-paniculata_contig11952.1243.1 vs. uniprot
Match: W7TJZ2_9STRA (Protein required for ethanol metabolism n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJZ2_9STRA)

HSP 1 Score: 292 bits (748), Expect = 4.390e-94
Identity = 147/271 (54.24%), Postives = 185/271 (68.27%), Query Frame = 0
Query:    7 CKWSWANRQCVPADLCQYKYQFLDATPSESCRSKVLTHKRKVFKNPDVEVKPAYAIAGAAGLFAGDLVAIRYTDWLKKAPLLFNIVQGFVLFVSGDTLFQVLEQGWQ---KMVGLKWWRAVRSGLIGALNNGLVHYSYYKWIDRRFPYHMFSEKRWGPPDGAKSRLAIGLTKWAIEWPTIGLYKIVSMYVLTAAMS------RSMDTLLDRMQDGVLLTQLRGLQVWPIYDMILYAYVPTAHRPLFNSFMSILWGGYLSHVSQPKETEDDE 268
            C +++  R+C P   C YKY+FLDAT SESCR KV            +   PA   AGA  LF  D+ AI +T  L+  P+ FN+VQGF+L ++GDT FQ++EQG     K VG+K WRAVRSGLIGALNNGLVHYSYYK+IDRRFPYH+F+E+R+G P+G   +L +   K+ IEWPTIG+YKI SM VLTAA+       +    + ++ +    LT LR LQVWPIYD ILYAYVP +HRPLFN+FMSI WGGYLSH+SQ +  +  E
Sbjct:   58 CHFNYRLRRCEPVAHCHYKYRFLDATFSESCRLKVQRPHTTPLYRSKINGNPALIAAGATALFGVDIAAIIFTPLLQNFPITFNVVQGFILCLAGDTYFQIVEQGGLRGVKRVGVKAWRAVRSGLIGALNNGLVHYSYYKYIDRRFPYHLFTEERFGKPEGTYYKLCVAWAKYWIEWPTIGVYKIASMMVLTAALDGRNGWRKRFAKIPEKFRKRFRLTWLRSLQVWPIYDTILYAYVPASHRPLFNTFMSIAWGGYLSHISQVEGEDGGE 328          
BLAST of mRNA_H-paniculata_contig11952.1243.1 vs. uniprot
Match: J3JS56_NYCOV (MPV17 protein (Fragment) n=1 Tax=Nyctotherus ovalis TaxID=70075 RepID=J3JS56_NYCOV)

HSP 1 Score: 55.1 bits (131), Expect = 1.490e-5
Identity = 49/196 (25.00%), Postives = 86/196 (43.88%), Query Frame = 0
Query:   74 VAIRYTDWLKKAPLLFNIVQGFVLFVSGDTLFQVLEQ-------GWQKMVGLK---WWRAVRSGLIGALNN-GLVHYSYYKWIDRRFPYHMFSEKRWGPPDGAKSRLAIGLTKWAIEWPTIGLYKIVSMYVLTAAMSRSMDTLLDRMQDGVLLTQLRGLQVWPIYDMILYAYVPTAHRPLFNSFMSILWGGYLSHV 258
            +A +YTD LK+ PLL   + G +L  + D   Q +E+       G  K+ G +   + R +R GL   + N  ++HY         +  H+  +    P  G  + L           P   ++  +    LT    R M   +D+ ++ +  T      +WP+ ++I +  VP  ++ LF++  S  WG YLS+V
Sbjct:    3 IARKYTDLLKRYPLLTKAITGGILAFASDFTSQTIEKRTHVDTVGMLKIEGSQSFDYKRNIRFGLFNLIINVPILHY---------YTAHLLPKIC--PVTGVPTLLRKVAFDQIFAAP---VFLTIFFGGLTLCEFRGMQAAVDKCRERLWPTLKTNWMIWPLVNLINFGLVPIHYQVLFSNVASFGWGTYLSYV 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11952.1243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVM5_ECTSI1.820e-14572.59Protein required for ethanol metabolism n=1 Tax=Ec... [more]
A0A836CEJ0_9STRA5.900e-10858.21Protein required for ethanol metabolism n=1 Tax=Tr... [more]
A0A6H5JN17_9PHAE1.360e-9876.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TJZ2_9STRA4.390e-9454.24Protein required for ethanol metabolism n=2 Tax=Mo... [more]
J3JS56_NYCOV1.490e-525.00MPV17 protein (Fragment) n=1 Tax=Nyctotherus ovali... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 200..256
e-value: 2.6E-9
score: 37.2
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 74..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11952contigH-paniculata_contig11952:608..5508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11952.1243.1mRNA_H-paniculata_contig11952.1243.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11952 441..7178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11952.1243.1 ID=prot_H-paniculata_contig11952.1243.1|Name=mRNA_H-paniculata_contig11952.1243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MKGHKLCKWSWANRQCVPADLCQYKYQFLDATPSESCRSKVLTHKRKVFK
NPDVEVKPAYAIAGAAGLFAGDLVAIRYTDWLKKAPLLFNIVQGFVLFVS
GDTLFQVLEQGWQKMVGLKWWRAVRSGLIGALNNGLVHYSYYKWIDRRFP
YHMFSEKRWGPPDGAKSRLAIGLTKWAIEWPTIGLYKIVSMYVLTAAMSR
SMDTLLDRMQDGVLLTQLRGLQVWPIYDMILYAYVPTAHRPLFNSFMSIL
WGGYLSHVSQPKETEDDEVPEATA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22