prot_H-paniculata_contig11905.1220.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11905.1220.1
Unique Nameprot_H-paniculata_contig11905.1220.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
[Close]
BLAST of mRNA_H-paniculata_contig11905.1220.1 vs. uniprot
Match: A0A6H5KLD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD9_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 9.480e-25
Identity = 56/97 (57.73%), Postives = 75/97 (77.32%), Query Frame = 0 
Query:    1 MGQTVNMISVRITIGMSGHTMTKIKALEEDRAVAAGGELLAEGFVYGVAGALVIWEYMSSASDKEAKDVLAKAKKAKEQEGLKDALEAINRRLTVLE 97
            MGQ  N IS RI+I ++GHT TKIK LEED+A+A GG +LAEGF+YG+  +L+++EYMS+A DKEAK+ ++K KK +E+  +  ALE INRRL  LE
Sbjct:   42 MGQATNRISARISIRLAGHTTTKIKPLEEDKAIADGGNMLAEGFIYGLGTSLMVFEYMSNAKDKEAKEAISKLKKEEEKREIAQALEDINRRLARLE 138
[Close]
BLAST of mRNA_H-paniculata_contig11905.1220.1 vs. uniprot
Match: A0A835YQK9_9STRA (Optic atrophy 3 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQK9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 8.810e-9
Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 0 
Query:    1 MGQTVNMISVRITIGMSGHTMTKIKALEEDRAVAAGGELLAEGFVYGVAGALVIWEYMSSASDKEAKDVLAKAKKAKEQEGLKDALEAINRRLTVLE 97
            MGQ+ + +S  I++  +G T + IK L+E +A+A GG+LL+E F++ VAG L++W+Y +SA+   AK              LK +LEAI+ RL  +E
Sbjct:   42 MGQSSHKVSTIISVRAAGFTASNIKPLDESKALAIGGDLLSEIFIFSVAGGLLVWDYNNSAAKAAAKAXXXXXXXXXXARQLKASLEAIHARLDEIE 138
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11905.1220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLD9_9PHAE9.480e-2557.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQK9_9STRA8.810e-939.18Optic atrophy 3 protein-domain-containing protein ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010754Optic atrophy 3-likePFAMPF07047OPA3coord: 1..73
e-value: 6.0E-14
score: 51.9
IPR010754Optic atrophy 3-likePANTHERPTHR12499OPTIC ATROPHY 3 PROTEIN OPA3coord: 1..151
NoneNo IPR availablePANTHERPTHR12499:SF0OPTIC ATROPHY 3 PROTEINcoord: 1..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11905contigH-paniculata_contig11905:292..7185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11905.1220.1mRNA_H-paniculata_contig11905.1220.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11905 246..7474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11905.1220.1 ID=prot_H-paniculata_contig11905.1220.1|Name=mRNA_H-paniculata_contig11905.1220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MGQTVNMISVRITIGMSGHTMTKIKALEEDRAVAAGGELLAEGFVYGVAG
ALVIWEYMSSASDKEAKDVLAKAKKAKEQEGLKDALEAINRRLTVLEMTR
LERAEDQSDTLHRDDVKASISFPLVRWIPFRPLGTEVHKAAAEGSTLPDL
EEGRENGRGVRSDKCESQQTGVVRQGSEGGQAGTRSSNPPNRVQENTESE
ARIGSTLTSEGNARELKDRGAAVKYNGSGRGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010754OPA3-like