prot_H-paniculata_contig1186.1194.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1186.1194.1
Unique Nameprot_H-paniculata_contig1186.1194.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length342
Homology
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BLAST of mRNA_H-paniculata_contig1186.1194.1 vs. uniprot
Match: D7FWZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ2_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.310e-16
Identity = 97/188 (51.60%), Postives = 112/188 (59.57%), Query Frame = 0 
Query:    6 GARGATGAVDVGVSHLNMNINVTGGGVGGLGSSVVGLAGTSDSGXXXXXXXXXXXXXXXXXPPLVGFGATNGGLPSGRSRSPGFDVDPPGMPSKPSAMGDGTASNSAAAAFLANATVVTGACSASSGGSAPAGGRVW-GAAPGSSGDSPXXXXAAAVAAASKVNSDMDHAFAGAMLQRSSSAPPMSDH 192
            G+RGATGAVDVGVSHLNMNINV GGG G LGS +      S +G     XXXXXXXXXXXX   +   ++NGGLPSGRSRSPGFDVD P   +                   A ATVVTG  SA            W GA  G +G   XXXX    +     ++++DHAFAGAMLQRS+SAPP+SDH
Sbjct:    3 GSRGATGAVDVGVSHLNMNINVIGGGHG-LGSGLS-AGDKSAAGDSTVSXXXXXXXXXXXXXXXMATSSSNGGLPSGRSRSPGFDVDKP--TTXXXXXXXXXXXXXXXXXXXAGATVVTG--SAPGAXXXXXXXXXWLGAGDGFAGSXXXXXXXXXSS-----SNNVDHAFAGAMLQRSTSAPPVSDH 179
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1186.1194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWZ2_ECTSI4.310e-1651.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1186contigH-paniculata_contig1186:12246..26350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1186.1194.1mRNA_H-paniculata_contig1186.1194.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1186 12246..26468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1186.1194.1 ID=prot_H-paniculata_contig1186.1194.1|Name=mRNA_H-paniculata_contig1186.1194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp
MDGPRGARGATGAVDVGVSHLNMNINVTGGGVGGLGSSVVGLAGTSDSGG
GGGGDSSSVAGGSTSSPPLVGFGATNGGLPSGRSRSPGFDVDPPGMPSKP
SAMGDGTASNSAAAAFLANATVVTGACSASSGGSAPAGGRVWGAAPGSSG
DSPSSGSAAAVAAASKVNSDMDHAFAGAMLQRSSSAPPMSDHVEGWSRSV
PRGAPATVPDGAPSGPAADSDYYYYYYAPHSINPRMAGASREGGGNGSRT
LAAPIAQSHTSHILDKATGSPPDGRTSPHLSNGDVSAPGPDYRKLNGTPG
VSSTPVGGGSGDEGGVTVGNGPPRSASPPGFPDVVSGGGAGG
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