prot_H-paniculata_contig11859.1192.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11859.1192.1
Unique Nameprot_H-paniculata_contig11859.1192.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
[Close]
BLAST of mRNA_H-paniculata_contig11859.1192.1 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 4.740e-18
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 0 
Query:    2 IGFLAILVWNGIIDVVEVNFMMVGHTQFKFDQIFSRLAVGVRGKNIFTRSQQSEILKDSYKHLPVHCTALRN 73
            +GF  +LV   +I VVE+NFMMVGHT  K DQIFSR + G++GKNIFTR+Q +E+L+ SY  +PV C+ L N
Sbjct:   34 LGFAGLLVAASVIRVVEINFMMVGHTHMKIDQIFSRFSRGIKGKNIFTRTQLAEVLQASYTEVPVFCSTLGN 105
[Close]
BLAST of mRNA_H-paniculata_contig11859.1192.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 7.070e-16
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 0 
Query:    2 IGFLAILVWNGIIDVVEVNFMMVGHTQFKFDQIFSRLAVGVRGKNIFTRSQQSEILKDSYKHLPVHCTALRN 73
            +G+  +LV   ++ VVE++FMMVGHT  K DQ+FSR + G++GKNIFTR+  +E L+ SY  +PV C+ LRN
Sbjct:  237 LGYAGLLVAADVVRVVEIHFMMVGHTHTKIDQVFSRFSRGIKGKNIFTRTHLAEELRASYTEVPVFCSTLRN 308
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11859.1192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCW3_9PHAE4.740e-1856.94Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUU1_9PHAE7.070e-1651.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11859contigH-paniculata_contig11859:4324..5063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11859.1192.1mRNA_H-paniculata_contig11859.1192.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11859 4324..5063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11859.1192.1 ID=prot_H-paniculata_contig11859.1192.1|Name=mRNA_H-paniculata_contig11859.1192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
MIGFLAILVWNGIIDVVEVNFMMVGHTQFKFDQIFSRLAVGVRGKNIFTR
SQQSEILKDSYKHLPVHCTALRN
back to top