prot_H-paniculata_contig1184.1181.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1184.1181.1
Unique Nameprot_H-paniculata_contig1184.1181.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length144
Homology
BLAST of mRNA_H-paniculata_contig1184.1181.1 vs. uniprot
Match: D7FNK9_ECTSI (YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK9_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.930e-64
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 0
Query:   27 KHLYSIHCMDDQSCGRVGGEPRGGSTKRMNNYPAHKEYQGATANPEDPRYIKKVCAGPMVEEDDKYMVGSFFLVEATREEAQKFVDNDPFNKESVWQTISVQRYVSVVGVKAHDGNL 143
            KHLY+IHC+DDQSCG+  GEPRGGS KRM NYPAHKEYQ ATANPEDPR+I KV AGP+V+E D YM+GSFFLV ATREEAQKFVDNDPF KE VW TIS++RYVSVVGVK H GNL
Sbjct:    5 KHLYAIHCLDDQSCGKADGEPRGGSAKRMGNYPAHKEYQAATANPEDPRFINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKKEGVWSTISLERYVSVVGVKPHSGNL 121          
BLAST of mRNA_H-paniculata_contig1184.1181.1 vs. uniprot
Match: A0A835Z4J4_9STRA (YCII-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 9.520e-35
Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = 0
Query:   27 KHLYSIHCMDDQSCGRVG--GEPRGGSTKRMNNYPAHKEYQGATANPEDPRYIKKVCAGPMVEEDDKYMVGSFFLVEATREEAQKFVDNDPFNKESVWQTISVQRYVSVVGVKA 138
            K LY I C+DDQSCG      EPR GS KR+  Y  HK YQ +TA+P+ P +I K+ AGPMV +D KYMVGS F+VE TRE+ + F  NDPF K  VW +I+ ++Y SV G++A
Sbjct:    4 KRLYVITCVDDQSCGPADPPAEPRSGSAKRIGIYAEHKAYQASTADPDSPNFITKITAGPMVTDDGKYMVGSSFIVEGTREQVEAFYKNDPFYKAGVWASITCEQYFSVQGIQA 117          
BLAST of mRNA_H-paniculata_contig1184.1181.1 vs. uniprot
Match: A0A7S2V359_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V359_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.770e-34
Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 0
Query:   27 KHLYSIHCMDDQSCGRVGGEPRGGSTKRMNNYPAHKEYQGATANPEDPRYIKKVCAGPMVEEDDKYMVGSFFLVEATREEAQKFVDNDPFNKESVWQTISVQRYVSV-VGVKAHDG 141
            K L+ IHC+DD S     GE  GGS KRM  Y  HK YQGATANPE+P YI+K+ AGP++ ++  +M+GS F+VE+T+EEA  F +NDPF K  VW+++++ RYVS+  G+ AH G
Sbjct:   50 KQLWLIHCVDDDSSPLEDGETFGGSGKRMAVYAEHKVYQGATANPENPEYIRKLAAGPLLTDEGTHMIGSTFIVESTKEEAIAFNENDPFAKAGVWKSVNISRYVSIPAGLIAHAG 165          
BLAST of mRNA_H-paniculata_contig1184.1181.1 vs. uniprot
Match: UPI0004D00C7F (YciI family protein n=1 Tax=Caballeronia sordidicola TaxID=196367 RepID=UPI0004D00C7F)

HSP 1 Score: 60.8 bits (146), Expect = 1.860e-9
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   30 YSIHCMDDQSCGRVGGEPRGGSTKRMNNYPAHKEYQGATANPEDPRYIKKVCAGPMVEEDDKYMVGSFFLVEATREEA-QKFVDNDPFNKESVWQTISVQRYVSVV 134
            Y ++C+D    G V          R+ +Y AHK Y            +K + +GP+V +DDK M+GSFFL E+   EA + F   DPFNK  +W+T+ V+ ++  V
Sbjct:    3 YIVYCLDHD--GMVD--------TRLAHYDAHKAYLATLP-------VKTLISGPLVADDDKTMIGSFFLYESESIEAVRNFAKEDPFNKVGIWKTMEVRPFLKRV 91          
BLAST of mRNA_H-paniculata_contig1184.1181.1 vs. uniprot
Match: UPI0003669DA7 (YciI family protein n=1 Tax=Cupriavidus sp. UYPR2.512 TaxID=1080187 RepID=UPI0003669DA7)

HSP 1 Score: 57.0 bits (136), Expect = 5.710e-8
Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 0
Query:   32 IHCMDDQSCGRVGGEPRGGSTKRMNNYPAHKEYQGATANPEDPRYIKKVCAGPMVEEDDKYMVGSFFLVE-ATREEAQKFVDNDPFNKESVWQTISVQRYV 131
            +HC+D  + G    + R  S    N++ AH   QGA          K + AGP+V+ +D+ ++GSFFL E AT E+ + F+ NDP NK  VW+++ V+  V
Sbjct:    5 VHCLDHPNVG----DRRQAS---QNDHRAH--LQGAPG--------KLLVAGPLVQGEDQAVIGSFFLYEDATAEQVESFLRNDPLNKAGVWKSVEVRELV 88          
BLAST of mRNA_H-paniculata_contig1184.1181.1 vs. uniprot
Match: A0A2E6U228_9HYPH (YCII domain-containing protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E6U228_9HYPH)

HSP 1 Score: 52.0 bits (123), Expect = 5.110e-6
Identity = 21/55 (38.18%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   82 AGPMVEEDDKYMVGSFFLVE-ATREEAQKFVDNDPFNKESVWQTISVQRYVSVVG 135
            AGP + +D   M+G+  +++ ATR+EAQ F DNDP+NK  +++ + ++R+  ++G
Sbjct:   36 AGPFISDDGDTMIGTLLVLDVATRQEAQAFADNDPYNKAGLFEAVEIRRWNHLIG 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1184.1181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FNK9_ECTSI1.930e-6479.49YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835Z4J4_9STRA9.520e-3553.51YCII-related n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2V359_9STRA4.770e-3452.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI0004D00C7F1.860e-934.91YciI family protein n=1 Tax=Caballeronia sordidico... [more]
UPI0003669DA75.710e-836.63YciI family protein n=1 Tax=Cupriavidus sp. UYPR2.... [more]
A0A2E6U228_9HYPH5.110e-638.18YCII domain-containing protein n=1 Tax=Rhodobiacea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005545YCII-relatedPFAMPF03795YCIIcoord: 79..127
e-value: 3.1E-5
score: 24.3
NoneNo IPR availableGENE3D3.30.70.1060coord: 29..136
e-value: 1.1E-13
score: 53.0
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 52..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1184contigH-paniculata_contig1184:24718..26151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1184.1181.1mRNA_H-paniculata_contig1184.1181.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1184 24622..26151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1184.1181.1 ID=prot_H-paniculata_contig1184.1181.1|Name=mRNA_H-paniculata_contig1184.1181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp
MSSPPPPGLFRAFCQSLDISLFFVPAKHLYSIHCMDDQSCGRVGGEPRGG
STKRMNNYPAHKEYQGATANPEDPRYIKKVCAGPMVEEDDKYMVGSFFLV
EATREEAQKFVDNDPFNKESVWQTISVQRYVSVVGVKAHDGNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005545YCII
IPR011008Dimeric_a/b-barrel