prot_H-paniculata_contig1180.1151.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1180.1151.1
Unique Nameprot_H-paniculata_contig1180.1151.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length339
Homology
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BLAST of mRNA_H-paniculata_contig1180.1151.1 vs. uniprot
Match: A0A6H5LB16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB16_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.380e-6
Identity = 37/112 (33.04%), Postives = 52/112 (46.43%), Query Frame = 0 
Query:   77 ESSKELPRTSLALCRVSRRCIAVHLRVSNKTPRSVWTEDERSGGARCLCPRLPTLKVVSLTWQRAGKDLARAGADSWEEVAELTFGREFNSSICGLSWPPNLERLSFGSYFN 188
            +S K+L   SL++C  SR CIA HLRV  +TP+ +WT   RS G R     +P ++V                   W     LTF   F  ++  + W   L ++SFG  FN
Sbjct:    9 KSVKQLQLASLSICSESRACIAFHLRVGRRTPKRLWTTT-RSTGKRVGTDSVPPMRV------------------DW-----LTFRECFEPAVRNVVWRAGLRKISFGKQFN 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1180.1151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LB16_9PHAE2.380e-633.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 243..284
e-value: 2.9E-5
score: 24.2
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 158..285
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 158..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1180contigH-paniculata_contig1180:3877..14569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1180.1151.1mRNA_H-paniculata_contig1180.1151.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1180 3255..14822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1180.1151.1 ID=prot_H-paniculata_contig1180.1151.1|Name=mRNA_H-paniculata_contig1180.1151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=339bp
MGRKRRIANGGNFAAGDARDASSVMKQQKADRSAPSRDSYCETPSGAACG
RGSGSSTLAETILSLVVQSEVIGPGGESSKELPRTSLALCRVSRRCIAVH
LRVSNKTPRSVWTEDERSGGARCLCPRLPTLKVVSLTWQRAGKDLARAGA
DSWEEVAELTFGREFNSSICGLSWPPNLERLSFGSYFNRDITTTTNTKTN
SVIPKTAAPITTTTTTTTTTTTTTTTTMLLPRSLVELTFGKHFNKPLPKT
LPPRLRKLTLGRNFNRSVRNVVAWPSTLEEVCFGEALFVCGREVPPKLAR
DPARWRVVLTEPGVFSKGVKFVRKEEEEEGEKAKSAEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP