prot_H-paniculata_contig11734.1112.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11734.1112.1
Unique Nameprot_H-paniculata_contig11734.1112.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length498
Homology
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BLAST of mRNA_H-paniculata_contig11734.1112.1 vs. uniprot
Match: A0A6H5JVQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVQ3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 4.260e-12
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 0 
Query:  437 AETAADGRDGKAG--------AAPRLRTFQEKLGQGEKKWWPWAYEVLVVQWTQVLATVDGRVQ 492
            A  AADG DG A          + RLRTF+EKL QGEKKWWPW YEVLVVQWT+VLAT  G ++
Sbjct:   21 ATAAADGADGGAAEGSKSSGSGSVRLRTFEEKLNQGEKKWWPWLYEVLVVQWTEVLATARGGME 84
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BLAST of mRNA_H-paniculata_contig11734.1112.1 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.090e-10
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:  441 ADGRDGKAGAAPRLRTFQEKLGQGEKKWWPWAYEVLVVQWTQVLATVDGRVQ 492
            A+G       + RLRTF+EKL QGEKKWWPW YEVLVVQWT+VLAT  G  +
Sbjct:  973 AEGTRSSGSGSVRLRTFEEKLNQGEKKWWPWLYEVLVVQWTEVLATARGGTE 1024
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11734.1112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVQ3_9PHAE4.260e-1260.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBX9_ECTSI1.090e-1063.46Similar to dedicator of cytokinesis n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11734contigH-paniculata_contig11734:4100..7496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11734.1112.1mRNA_H-paniculata_contig11734.1112.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11734 4100..7497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11734.1112.1 ID=prot_H-paniculata_contig11734.1112.1|Name=mRNA_H-paniculata_contig11734.1112.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=498bp
GAGVGGSSASVAILPPPAVPRLDFTNPFFFANPGPGVVTSASSTAAAHVH
SASAPSCLSSGSFTPSRCDTAAASANADGADGDVDDDVVAAVVTSLATFF
SGTTAIRVPMPTSPIMTPSHSAPKTTMATSPIKTTSATSSSSATTAVVTP
TTFSSSTTAAPNVATAASVGAVGAAGVDNRDTNPFGQHEYQQRPQQPPPR
RHRTNNINNTHNINNHYHAPTTANPIKMGSSLSSPSKPLPATPPPTPTTS
CSPPAPSTTTTKLTSSTTTGPATATPLILLNVGKNGRKQNLNNAEIPTHR
PTSKPHHAAAAAPSSSSSSTGNAPGGTGASQEDPYSLRAQRMRSPSKLLG
TSITRSVVGSSARGSSTSPVRGRGTGVVEIRSLEESYGRMGMGAGGSRGR
GAMGSSSRTMGAEAGSNHVMPPPPPGERRMHSSSSAAETAADGRDGKAGA
APRLRTFQEKLGQGEKKWWPWAYEVLVVQWTQVLATVDGRVQGGDGVG
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