prot_H-paniculata_contig11700.1089.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11700.1089.1
Unique Nameprot_H-paniculata_contig11700.1089.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length84
Homology
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BLAST of mRNA_H-paniculata_contig11700.1089.1 vs. uniprot
Match: D8LQX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX2_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.990e-12
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0 
Query:    5 GTSRAIREAEEQVNSLKLRIDKKRRRLDVASLERDATKAEYQERVGGGRRSALKESIAWLEHAKLYL 71
            G  RA  +A+++V  LK R+  K RRL+ A  +RDA +AEYQ  +G G+RSALKES+AWLEHA L L
Sbjct: 1060 GVGRAPSDAQDEVARLKARLKNKTRRLEGAIFDRDAIRAEYQHLIGKGQRSALKESLAWLEHAALQL 1126
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11700.1089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQX2_ECTSI1.990e-1255.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11700contigH-paniculata_contig11700:2335..5520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11700.1089.1mRNA_H-paniculata_contig11700.1089.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11700 2335..5941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11700.1089.1 ID=prot_H-paniculata_contig11700.1089.1|Name=mRNA_H-paniculata_contig11700.1089.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp
GGERGTSRAIREAEEQVNSLKLRIDKKRRRLDVASLERDATKAEYQERVG
GGRRSALKESIAWLEHAKLYLESQQTLQNIPAS*
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