prot_H-paniculata_contig1168.1073.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1168.1073.1
Unique Nameprot_H-paniculata_contig1168.1073.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length363
Homology
BLAST of mRNA_H-paniculata_contig1168.1073.1 vs. uniprot
Match: A0A6H5KBW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW2_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 7.220e-129
Identity = 199/363 (54.82%), Postives = 275/363 (75.76%), Query Frame = 0
Query:    1 MTICTVGGVLFFNAITRQLEIYAHGNKQSKELLESVYRELSVLGIVAFVIWSIQSSSYLALDYDVKHFFEVVHMTLFLAAIFHSFFVVLVSLYSKQVSKRWDVYEDDEMKRYKELKQQHRRTAQALGLRHSTLKRGVGPLRQMWMWIRHPALSRRLYQLSENVSYHAMRSHFIKMNQLPRNFRFSVYLKKCEQEVVIEMAEIKESVWVGFILAVGIELYIKGLFGEAESGDDVRILFLISAGLVLIAALGVHFKLGKIYRALLYSYTTSTDRREDFMQFLSPDANALFRQQDMFWFGQPEIMPIMLQSMQFLLATMVAVLVWFGTGHDEMTDVVVVGEIVLAVGALGIYTVVLPSFIPAFTMV 363
            + ICTVGGVLFF  I  Q+   A G + +++LLE++YREL++LG+VAF++WSI  S  + ++Y  KHFFE +HM LFLAA+ H+FFV +V+LY++Q+++RWD++EDDEM+RYK+LKQQHRRTAQ LG+RH+ LK G+G  R  W+ +RHP LSRRL +LSE+V YHA+R+ FIK NQLP+NFRF+ YL KCEQ VV+E+A +KE VWV  IL VG EL++KG+ G+AES +DV+ +F+    +V++AA+ VH KL  IY  ++ SY   T+RR+D MQF+ P  +   RQ+ +FWF +P +M + LQSMQFLLA MV  L+WFG+   + T V+++ E+ L VGA GIYT+VLP FIP +T V
Sbjct:   44 VVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALYARQINRRWDIFEDDEMRRYKDLKQQHRRTAQKLGIRHADLKYGIGTWRAAWLTVRHPILSRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESSEDVKPIFITGTIIVMLAAIAVHLKLRSIYYDMIRSY--HTERRDDLMQFVGPSTSNTMRQKSLFWFSRPGLMLVTLQSMQFLLAIMVGALIWFGS--TDSTGVMILAEVFLGVGAFGIYTIVLPKFIPKYTTV 402          
BLAST of mRNA_H-paniculata_contig1168.1073.1 vs. uniprot
Match: D7FXU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU3_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 8.970e-129
Identity = 197/363 (54.27%), Postives = 274/363 (75.48%), Query Frame = 0
Query:    1 MTICTVGGVLFFNAITRQLEIYAHGNKQSKELLESVYRELSVLGIVAFVIWSIQSSSYLALDYDVKHFFEVVHMTLFLAAIFHSFFVVLVSLYSKQVSKRWDVYEDDEMKRYKELKQQHRRTAQALGLRHSTLKRGVGPLRQMWMWIRHPALSRRLYQLSENVSYHAMRSHFIKMNQLPRNFRFSVYLKKCEQEVVIEMAEIKESVWVGFILAVGIELYIKGLFGEAESGDDVRILFLISAGLVLIAALGVHFKLGKIYRALLYSYTTSTDRREDFMQFLSPDANALFRQQDMFWFGQPEIMPIMLQSMQFLLATMVAVLVWFGTGHDEMTDVVVVGEIVLAVGALGIYTVVLPSFIPAFTMV 363
            + ICTVGGVLFF  I  Q+   A G + +++LLE++YREL++LG+VAF++WSI  S  + ++Y  KHFFE +HM LFLAA+ H+FFV +V+LY++Q+++RWD++EDDEM+RYK+LKQQHRRTAQ LG+R + LK G+G  R  W+ +RHP L RRL +LSE+V YHA+R+ FIK NQLP+NFRF+ YL KCEQ VV+E+A +KE VWV  IL VG EL++KG+ G+AES +DV+ +F+    +V++AA+ VH KL  IY  ++ SY  ST+RR+D MQF+ P  +   RQ+ +FWF +P +M + LQSMQFLLA MV  L+WFG+   + T ++++ E+ L VGA GIYT+VLP FIP +T V
Sbjct:   52 VVICTVGGVLFFELICHQMNHAAEGKRHAQDLLETLYRELAILGVVAFILWSINVSPAVDIEYGDKHFFEQIHMALFLAALLHTFFVGVVALYARQINRRWDIFEDDEMRRYKDLKQQHRRTAQKLGIRQADLKYGIGTWRAAWLTVRHPILFRRLSELSEHVGYHAIRAQFIKSNQLPKNFRFASYLTKCEQSVVLELAGVKEGVWVALILFVGAELFVKGILGKAESSEDVKPIFITGTVIVMLAAIAVHLKLRSIYYDMIRSYQASTERRDDLMQFVGPGTSNTMRQKSLFWFSRPGLMLVTLQSMQFLLAIMVGALIWFGS--TDSTGLMILAEVFLGVGAFGIYTIVLPKFIPKYTTV 412          
BLAST of mRNA_H-paniculata_contig1168.1073.1 vs. uniprot
Match: A0A7S1TZ75_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ75_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.010e-41
Identity = 112/365 (30.68%), Postives = 189/365 (51.78%), Query Frame = 0
Query:    3 ICTVGGVLFFNAITRQLEIYAHGNKQSKELLESVYRELSVLGIVAFVIWSIQSSSYLALDYDVKHFFEVVHMTLFLAAIFHSFFVVLVSLYSKQVSKRWDVYE--DDEMKRYKELKQQHRRTAQALGLRHSTLKRGVGPLRQMWMWIRHPALSRRLYQLSENVSYHAMRSHFIKMNQLPRNFRFSVYLKKCEQEVVIEMAEIKESVWVGFILAVGIELYIKGLFGEAESGDDVR-ILFLISAGLVLIAALGVHFKLGKIYRALLYSYTTSTDRREDFMQFLSPDANALFRQQDMFWFGQPEIMPIMLQSMQFLLATMVAVLVWFGTGHDEMTD--VVVVGEIVLAVGALGIYTVVLPSFIPAFTM 362
            + T+ GVL     T  L+      K  +E++  +YREL +LGIVAF ++ I+SS  + +    KH FE VH+TLFL A+ +   +V V  +S  +   W  YE   +   +++E+++     A+ +G       R  G    +W ++ HP       +L E+V +H +R HFI+ N +P NF F+ YLKKC+Q V++E+ E++   WV     + I LY +G+  +   G DV  ++  +SA ++   AL V+FK+  IY  LL+S     D         + D      Q+ +FW G P ++  MLQ +QF+++  +AV +       + +D  V +   I++   AL  +  +LP  +P +T+
Sbjct:   29 VLTILGVLLIQYGTHSLDKVIEKKKSLREIVNMMYRELMILGIVAFGLFVIESSELVTISDTDKHVFEEVHLTLFLVAVIYGLMIVAVLYFSYAIDNTWKHYEALQNVSGQWQEIRENFDALARQIGAPSGYDARSAGITSHLWRFLAHPVSWMNYKRLLEHVRFHELRQHFIRANHMPGNFAFAGYLKKCKQHVMLELVEVRSGAWVLIAWLLSINLYAEGINEDFLIGADVATVMCTLSACVIAFCAL-VYFKINHIYWCLLHSEFIHFDPNNKQASMRAEDRRG--HQESLFWLGNPSLLIDMLQFIQFVVSVNLAVALQNIDTVRKNSDGGVKLAAMIIMLCLALLSFFALLPVAVPRYTL 390          
BLAST of mRNA_H-paniculata_contig1168.1073.1 vs. uniprot
Match: A0A7S2S7M7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7M7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.040e-5
Identity = 30/83 (36.14%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    1 MTICTVGGVLFFNAITRQLEIYAHGNKQSKELLESVYRELSVLGIVAFVIWSIQSSSYLALDYDVKHFFEVVHMTLFLAAIFH 83
            + I T+ GV+    +  +L      +   +E+L  +Y+EL +LGIVAF++++I+       + D+KH FE+VHMTLFL A+ +
Sbjct:   44 IAILTIIGVIIVQFVVDKLNHSIQKHLNGREILNMMYKELMILGIVAFLLFAIEIWG--ETEVDLKHEFEMVHMTLFLIALMY 124          
BLAST of mRNA_H-paniculata_contig1168.1073.1 vs. uniprot
Match: A0A7S3LEW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEW6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.900e-5
Identity = 38/133 (28.57%), Postives = 72/133 (54.14%), Query Frame = 0
Query:    1 MTICTVGGVLFFNAITRQLEIYAHGNKQSKELLESVYRELSVLGIVAFVIWSIQSSSYLALDYDVKHFFEVVHMTLFLAAIFHSFFVVLVSLYSKQVSKR-WDVYEDDEMKRYKELKQQHRRTAQALG-LRHS 131
            + + T+G ++    +   L+  AHG      +LE++Y EL++LG+V F ++ +Q   Y   + + K  F  VH  LF  A+ ++F  ++++    +VSK+ W   E  E+  Y E++++  R    LG L+H+
Sbjct:   17 VAVMTLGLIMVVEVVLHNLDHAAHGRPYFTAVLENIYSELAILGLVEFCVFLMQEY-YEDYNKEKKDVFGAVHFALFYTALLNAFQSMILAFAVGRVSKKMWVQTEALELNHYVEIREEFDRVTAELGRLQHT 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1168.1073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KBW2_9PHAE7.220e-12954.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXU3_ECTSI8.970e-12954.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TZ75_9STRA1.010e-4130.68Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2S7M7_9STRA1.040e-536.14Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3LEW6_9STRA1.900e-528.57Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004326Mlo-related proteinPFAMPF03094Mlocoord: 71..326
e-value: 3.6E-10
score: 38.8
NoneNo IPR availablePANTHERPTHR31942FAMILY NOT NAMEDcoord: 71..331
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 335..357
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 324..334
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..300
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 225..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..323
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 358..363
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..224
NoneNo IPR availableTMHMMTMhelixcoord: 206..225
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 235..253
NoneNo IPR availableTMHMMTMhelixcoord: 335..357
NoneNo IPR availableTMHMMTMhelixcoord: 303..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1168contigH-paniculata_contig1168:393..7504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1168.1073.1mRNA_H-paniculata_contig1168.1073.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1168 393..7519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1168.1073.1 ID=prot_H-paniculata_contig1168.1073.1|Name=mRNA_H-paniculata_contig1168.1073.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=363bp
MTICTVGGVLFFNAITRQLEIYAHGNKQSKELLESVYRELSVLGIVAFVI
WSIQSSSYLALDYDVKHFFEVVHMTLFLAAIFHSFFVVLVSLYSKQVSKR
WDVYEDDEMKRYKELKQQHRRTAQALGLRHSTLKRGVGPLRQMWMWIRHP
ALSRRLYQLSENVSYHAMRSHFIKMNQLPRNFRFSVYLKKCEQEVVIEMA
EIKESVWVGFILAVGIELYIKGLFGEAESGDDVRILFLISAGLVLIAALG
VHFKLGKIYRALLYSYTTSTDRREDFMQFLSPDANALFRQQDMFWFGQPE
IMPIMLQSMQFLLATMVAVLVWFGTGHDEMTDVVVVGEIVLAVGALGIYT
VVLPSFIPAFTMV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004326Mlo