prot_H-paniculata_contig11565.1003.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11565.1003.1
Unique Nameprot_H-paniculata_contig11565.1003.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length191
Homology
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BLAST of mRNA_H-paniculata_contig11565.1003.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.060e-9
Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 0 
Query:  102 NPLADHVDVVSNVVEFARNSGYLFVAGVSKHFKAAWG-DTPRTTSFDDMLQSPSHAAMLTETECDRYENKICPTAAAGGHLETIKWARRKG 191
            NPLAD   ++ +++ FA  +G+LFVAGVS+ ++ AWG + P  T  D  +QSPS       +    +   +C  AA+GGHL T+++AR  G
Sbjct:  726 NPLADPT-ILRHLISFAARNGFLFVAGVSRSWRDAWGVERPPETEVDAAVQSPSRLGWARASGLG-WGPSVCARAASGGHLATLRYARALG 814
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11565.1003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXW1_9PHAE1.060e-939.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11565contigH-paniculata_contig11565:5280..5852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11565.1003.1mRNA_H-paniculata_contig11565.1003.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11565 5070..5852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11565.1003.1 ID=prot_H-paniculata_contig11565.1003.1|Name=mRNA_H-paniculata_contig11565.1003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=191bp
MNTCNGKRKMEREEDEAPRRVTQRMTAANAAADAVADAVANVQGIAAVGC
DDNSNRNIKIQFQDTKASPSAITPSGASAQQQDSTPRVPARVGAPTQTRV
RNPLADHVDVVSNVVEFARNSGYLFVAGVSKHFKAAWGDTPRTTSFDDML
QSPSHAAMLTETECDRYENKICPTAAAGGHLETIKWARRKG
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