prot_H-paniculata_contig1154.990.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1154.990.1
Unique Nameprot_H-paniculata_contig1154.990.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length584
Homology
BLAST of mRNA_H-paniculata_contig1154.990.1 vs. uniprot
Match: D7G6T8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6T8_ECTSI)

HSP 1 Score: 508 bits (1309), Expect = 1.550e-173
Identity = 266/427 (62.30%), Postives = 321/427 (75.18%), Query Frame = 0
Query:  143 LALPLLNRFFNQASQLFQVGVLMGPIPTVFAACVTAFWAWQVLVAGSRRFQSRKTAEGIKVCRVPVPTVGPGSPGFVDRSPLLDAEELRAQVVSRYNPTLLVHGERGSGKTVAIRLSLHSQTSVVHIKLWAQDLDSPLKALSRAITDAAGVDVS-PGGARLVAEDALRRLKGKGWGVGGSQAPIVVIELDKRCTAAQLQAVLLACKRWGDDENLSKFVVEAPSARIARGLPISLADLRVEGVKMPPLSPREALQVARGSVPAGACRDWTGGRRDDLASYVVSRAGLGMLDLVRVGFAAGTATDPLAFHNAVDAFATREARAARGGVTAFLAALGSSARE----------HEELPKRLWAAVAGAAAVITGAKGRNPGLDEVLDELGIAEKDFERAAGGVGPVCPLAVDPFSYKVVVRSVFMKSALLA 558
            LALP+L R    ++ LFQVGVL+G IPT+ A  V  +WA+QV+V GS  +QSRK AE IK  R+P   VGPG+PGFVDR  LLDA+ LR +V SRYNPTLLVHGERGSGKTVA+RL+LHS  SVVH+KLW +D+  PL AL++AI D + V V+ PG A LV E ALR +KG+GW  GG+  PIVV+ELDKRC+   L  VLLACKRWGDDENL+KFVVEAPSARIARGLPISL+DLRVEGVKM PL+P EA QVA G VP  A R+W GGR++DLA Y+VS+ GLGMLDLVRVGFAA  A DPLA H +V+ FATRE+RAARGGV AFL +L +               E++ +RLW A+ GAAA   G  G+ PGLDEVL+ +G++E+ FE A  GVGP  PL+VDPFSYKV +RS+F ++AL A
Sbjct:    2 LALPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQSRKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTSSVQVTAPGSAPLVVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEEDIERRLWRAIEGAAARADGRGGKKPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEA 428          
BLAST of mRNA_H-paniculata_contig1154.990.1 vs. uniprot
Match: A0A836CEX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 9.870e-10
Identity = 85/328 (25.91%), Postives = 141/328 (42.99%), Query Frame = 0
Query:  237 RYNPTLLVHGERGSGKTVAIRLSLHSQTSVVHIKLWAQDLDSPLKALSRAITDAAGVDVSPGGARLVAEDALRRLKGKGWGVGGSQAPIVVIELDKRCTAAQLQAVLLACKRWGDDENLSKFVVEAPSARIARGLPISLADLRVEGVKMPPLSPREALQVARGSVPAGACRDWTGGRRDDLASYVVSRAGLGMLDLVRV-GFAAGTATDPLAFHNAVDAFATREARAARGGVTAFLAALGSSAREHEELPK-------RLWAAVAGAAAVITGAKGRNPGLDEVLDELGIAEKDFERAAGGVGPVCPLAVDPFSYKVVVRSVFMKSAL 556
            + NP+LLV+G RG GKT  +  +L     V+ +       D   + L + +   AG+     G +    D LR +    + +   + P+VVI++++R   A L  +LLA K+ G  E L+ F+    ++R A GL I +   RV G + P  S  EAL      +P              +A +VV + G   +DLV +     G   +P      V+A+     + AR  +  F+A     A+++E   K       R   A     A + G    +   D   D  G  E +    A  +      A+DPF + + ++S FM++A+
Sbjct:   44 KQNPSLLVYGARGVGKTSLVEAALQGTAGVLGMSYNGDGTDLEQR-LEQLLLKLAGLPEH--GPKADLGDRLRAIL-TFYQIVHKRRPVVVIDINERTGPATLSKLLLAAKQLGFQEKLATFIFVVSASRSALGLTIGIRQSRVRGYRAPDFSEDEALAYLAKHLPPFP----------GMAEFVVQQIGTRAMDLVELCSECRGVELEPEC-RERVEAYREACIKDARFALRGFVAI----AKKNEAFSKEASVAFFRQLLAADSDDAALAGTCVLDD--DYAADAFGFEEPELLLLA--LAKYHAFAIDPFDHTISMQSHFMQTAI 348          
BLAST of mRNA_H-paniculata_contig1154.990.1 vs. uniprot
Match: A0A835YHU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHU7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.260e-8
Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 0
Query:  239 NPTLLVHGERGSGKTVAIRLSLHSQTSVVHIKLWAQDLDSPLKALSRAITDAAGVDVSPG-GARLVAEDALRRLKGKGWGVGGSQAPIVVIELDKRCTAAQLQAVLLACKRWGDDENLSKFVVEAPSARIARGLPISLADLRVEGVKMPPLSPREALQVARGSVPAGACRDWTGGRRDDLASYVVSRAGLGMLDLVRV 435
            NP+LLV+G RG GKT  +  +L     V+ +       D   + L + +   AG+   PG G +    D LR +      V   + P+VVI +D+R   A L  +LLA ++ G  E L+ F+    + R A GLPI L+  +V G + P  +  EAL      +P+  C          +A + V + G   +DLV +
Sbjct:  105 NPSLLVYGARGGGKTSIVEAALQGIAGVLAMSYNGDGTDLEQR-LEQLLLKPAGL---PGHGPKADLGDRLRAILTFYQKVY-DRRPVVVIHIDERTAPATLSKLLLAAEQLGFQEKLATFIFVVSAYRSALGLPIGLSQTQVLGYRAPDFTEDEALAYLAKHLPS--C--------PGMAEFAVQQIGTRAMDLVEL 287          
BLAST of mRNA_H-paniculata_contig1154.990.1 vs. uniprot
Match: A0A1E7F6C6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6C6_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.400e-6
Identity = 58/201 (28.86%), Postives = 96/201 (47.76%), Query Frame = 0
Query:  241 TLLVHGERGSGKTVAIRLSLHSQTSVVHIKLWAQDLDSPLKALSRAITDAAGVDVSPGGARLV-AEDALRRLKGKGWGVGGSQAPIVVIELDKRCTAAQLQAVLLACKRWGDDENLSK-----FVVEAPSARIARGLPISLADLRVEGVKMPPLSPREALQVARGSVPAGACRDWTGGRRDDLASYVVSRAGLGMLDLVRV 435
            T+L++G+RGSGKT  IR +L  +  V+ I++  +  D   K L   ++    VD+      LV  ED     +           PI+V+ +D RC    L+AVL+ CK +  + +  +     F+V+   +R A     ++  LRV G+++      EAL  A   +PA + +D    RR ++A  VV +    +  L RV
Sbjct:   73 TVLLYGQRGSGKTSFIRYALKGRRGVLSIQITKKTHDEASKELIEKMSSQ--VDLLGTQQDLVFMEDVFAACR---------VPPIIVVTMDARCKGEVLEAVLILCKSFSYENSFRRGKQPRFLVDISFSRAAIDASSNIEVLRVVGIQVGNFPRDEALLYATERMPA-SLKDRR--RRHEIAMSVVEKFDCNVYTLQRV 259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1154.990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G6T8_ECTSI1.550e-17362.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEX4_9STRA9.870e-1025.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YHU7_9STRA2.260e-830.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7F6C6_9STRA3.400e-628.86Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..583
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.611

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1154contigH-paniculata_contig1154:850..26126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1154.990.1mRNA_H-paniculata_contig1154.990.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1154 803..26675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1154.990.1 ID=prot_H-paniculata_contig1154.990.1|Name=mRNA_H-paniculata_contig1154.990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=584bp
MRLVLSGIYLLSYGQLVTGLQFVTRPSATVVKLTICRQLHYVSAMAAAST
LFSDRSPPVNSWSRHVSSARCYSRYSIDRQLTLAAMVELSYHRLRSVLRQ
YQCKISTDATSLICSGGVFWNGPAALVKEEASGERMAQSVAGLALPLLNR
FFNQASQLFQVGVLMGPIPTVFAACVTAFWAWQVLVAGSRRFQSRKTAEG
IKVCRVPVPTVGPGSPGFVDRSPLLDAEELRAQVVSRYNPTLLVHGERGS
GKTVAIRLSLHSQTSVVHIKLWAQDLDSPLKALSRAITDAAGVDVSPGGA
RLVAEDALRRLKGKGWGVGGSQAPIVVIELDKRCTAAQLQAVLLACKRWG
DDENLSKFVVEAPSARIARGLPISLADLRVEGVKMPPLSPREALQVARGS
VPAGACRDWTGGRRDDLASYVVSRAGLGMLDLVRVGFAAGTATDPLAFHN
AVDAFATREARAARGGVTAFLAALGSSAREHEELPKRLWAAVAGAAAVIT
GAKGRNPGLDEVLDELGIAEKDFERAAGGVGPVCPLAVDPFSYKVVVRSV
FMKSALLAAAEDRQGPMEDEDSRETFYQSATTV*
back to top