prot_H-paniculata_contig1146.949.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1146.949.1
Unique Nameprot_H-paniculata_contig1146.949.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A6H5K2D2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D2_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 6.110e-33
Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGSA 70
            MMSVRRVMKGA+ERGLSGPEIQKH+MEMK+ELAAAVTMEDFRSSLRKVSKSVG+ADL+KYAEWM EFGSA
Sbjct:  281 MMSVRRVMKGALERGLSGPEIQKHIMEMKDELAAAVTMEDFRSSLRKVSKSVGQADLDKYAEWMKEFGSA 350          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: D8LRZ3_ECTSI (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ3_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 6.330e-31
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGSA 70
            MMSVRRVMKGA+ERGLSGPEIQKHVMEMK+ELAAAVTMEDFRSSLRKVSKSVG+ADL+KY EWM EFGSA
Sbjct:  709 MMSVRRVMKGALERGLSGPEIQKHVMEMKDELAAAVTMEDFRSSLRKVSKSVGQADLDKYDEWMKEFGSA 778          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A7S2V3J4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3J4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.660e-17
Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEEL-AAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGSA 70
            MMSVRRVM  A ++GL G EIQ+ + + K++L  AAVT +DF +SL+KVSKSVG+ADL++Y +WM EFGSA
Sbjct:   90 MMSVRRVMMEARKKGLQGAEIQQELQKNKDQLKTAAVTQDDFLTSLKKVSKSVGEADLQRYQQWMDEFGSA 160          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A7S3YD60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD60_HETAK)

HSP 1 Score: 76.6 bits (187), Expect = 5.380e-15
Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGSA 70
            MM VRRVM  A E+GL G  IQ  +M  K++L  AVTMEDF ++  KV++SVG+ DL+KY +WM EFGSA
Sbjct:  240 MMGVRRVMAAAREKGLQGSAIQAELMNNKDQLQTAVTMEDFLTAAGKVNRSVGEQDLKKYEQWMSEFGSA 309          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A7S3JVY7_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVY7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.580e-14
Identity = 36/70 (51.43%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGSA 70
            MMSVRR+M+ A  RGLSG ++Q+ ++  +E+L+AAV+ +DF +++ KV +SVG+ADL++YA+W  EFG+A
Sbjct:  392 MMSVRRIMEAARARGLSGTDMQRELVANQEKLSAAVSQQDFLNAIAKVHRSVGQADLKRYADWSKEFGAA 461          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A7S2NU11_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NU11_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.400e-12
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGS 69
            MMSVRRVMK A E+GL G  + +++ E    L +AVT +D   +++KV KSV K DL KY EWM EFGS
Sbjct:  404 MMSVRRVMKRAKEKGLGGNSLLQYIEENSLSLQSAVTQDDLSQAVQKVGKSVSKKDLNKYREWMDEFGS 472          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: W7U5R9_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5R9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.500e-12
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAA-VTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGS 69
            MMSVRRVM+ A ++GL G EIQK +M  +++L A+ VT  DF  +L K+SKSVG  DL++Y +WM EFGS
Sbjct:  591 MMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGS 660          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A4D9D8G0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8G0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.550e-12
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAA-VTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGS 69
            MMSVRRVM+ A ++GL G EIQK +M  +++L A+ VT  DF  +L K+SKSVG  DL++Y +WM EFGS
Sbjct:  591 MMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGS 660          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A7S2SSB0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSB0_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.560e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGSA 70
            MMS+RR+M     +G+    +Q+ +++ K  L  AVT EDF  +L+KVSKSVG+ADLE Y +WM EFGSA
Sbjct:  499 MMSMRRLMSDVRAKGIGLDAMQRELIQNKAALNTAVTQEDFILALKKVSKSVGQADLETYQKWMDEFGSA 568          
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Match: A0A7S3HFM6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFM6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 9.180e-11
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSKSVGKADLEKYAEWMVEFGSA 70
            MMSVRR+M+ A ++GL+   +Q  + +  E L  AV+ EDF  +L KV++SV   DLE++ EWM EFGSA
Sbjct:  111 MMSVRRIMEEARKKGLNKEAMQAMLKQQNEALNTAVSREDFLIALSKVNRSVSDHDLERFTEWMAEFGSA 180          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1146.949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2D2_9PHAE6.110e-3391.43AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LRZ3_ECTSI6.330e-3191.43Katanin p60 ATPase-containing subunit A1 n=1 Tax=E... [more]
A0A7S2V3J4_9STRA4.660e-1760.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YD60_HETAK5.380e-1557.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3JVY7_9STRA3.580e-1451.43Katanin p60 ATPase-containing subunit A1 n=1 Tax=A... [more]
A0A7S2NU11_9STRA5.400e-1253.62Katanin p60 ATPase-containing subunit A1 n=1 Tax=L... [more]
W7U5R9_9STRA5.500e-1255.71Katanin p60 ATPase-containing subunit A1 n=1 Tax=N... [more]
A0A4D9D8G0_9STRA5.550e-1255.71Katanin p60 ATPase-containing subunit A1 n=1 Tax=N... [more]
A0A7S2SSB0_9STRA3.560e-1151.43Katanin p60 ATPase-containing subunit A1 n=1 Tax=R... [more]
A0A7S3HFM6_9STRA9.180e-1148.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015415Vps4 oligomerisation, C-terminalPFAMPF09336Vps4_Ccoord: 27..68
e-value: 3.7E-10
score: 39.6
NoneNo IPR availableGENE3D1.10.8.60coord: 1..70
e-value: 1.1E-6
score: 30.9
NoneNo IPR availablePANTHERPTHR23074:SF65KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 1coord: 11..69
NoneNo IPR availablePANTHERPTHR23074AAA ATPASEcoord: 11..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1146contigH-paniculata_contig1146:21127..25021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1146.949.1mRNA_H-paniculata_contig1146.949.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1146 21127..25049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1146.949.1 ID=prot_H-paniculata_contig1146.949.1|Name=mRNA_H-paniculata_contig1146.949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
MMSVRRVMKGAMERGLSGPEIQKHVMEMKEELAAAVTMEDFRSSLRKVSK
SVGKADLEKYAEWMVEFGSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015415Vps4_C