prot_H-paniculata_contig11457.947.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11457.947.1
Unique Nameprot_H-paniculata_contig11457.947.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 7.660e-43
Identity = 65/87 (74.71%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI DSE+ YLGY  SESYGLTWKVRGFC +G+NPE+FD VNVYGNIY+S IH+N+FG+YTYGH+QGDWR N+M+ N +YGF
Sbjct:   23 MGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGF 109          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 6.100e-42
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI  SE+GYLGY DSESYGLTWKVRGFC + +NPE+FD VNVYGN+Y+S IH+  FG+YTYGHQQGDWR N+M+DN  YGF
Sbjct:   94 MGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGF 180          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 2.170e-41
Identity = 65/87 (74.71%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI DSE+ YLGY  SESYGLTWKVRGFC +G+NPE+FD VNVYGNIY+S IH+N+FG+YTYGH+QGDWR N+M+ N +YGF
Sbjct:  200 MGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGF 286          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.230e-40
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI  SE+GYLGY DSESYGLTWKVRGFC + +NPE+FD VNVYGN+Y+S IH+  FG+YTYGHQQGDWR N+M+DN  YGF
Sbjct:  200 MGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGF 286          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.890e-40
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI +SE+GYLG+ DSESYGLTWKVRGFC + +NP IFD VNVYGN+Y+S IH+  FG+YTYGHQQGDWR N+M+DN  YGF
Sbjct:  203 MGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGF 289          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 6.620e-40
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI  SE+GYLGY DSESYGLTWKVRGFC + +NPE+FD VNVYGN+Y+S IH+  FG+YTYGHQQGDWR N+M+DN  YGF
Sbjct:  200 MGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGF 286          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 9.740e-40
Identity = 65/87 (74.71%), Postives = 76/87 (87.36%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI +SE+GYLG+ DSESYGLTWKVRGFC + +NPEIFD VNVYGN+Y+S IH+  FG+YTYGHQQGDWR N+M+DN  YGF
Sbjct:  204 MGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGF 290          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.230e-39
Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI DSE+GYLGY+ SESYGLTWKVRGFC + +N ++F+ VNVYGNIY+S IH+N FG+YTYGHQQGDWR N+M+DN  YGF
Sbjct:  197 MGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGF 283          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 5.890e-39
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI +SE+ YLGY+ +E+YGLTWKVRGFC +  NPE+FD VNVYGNIY+S IH+N FG+YTYGHQQGDWR N+M+DN  YGF
Sbjct:  171 MGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGF 257          
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 142 bits (358), Expect = 2.290e-38
Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = 0
Query:    1 MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYGNIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF 87
            MGEARMDI DSE+ YLGY  SESYGLTWKVRG C + +N E+FD VNVYGNIY+S IH+NYFG+YTYGH+QGDWR N+M+ N +YGF
Sbjct:  197 MGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGF 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11457.947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q7XAJ9_9PHAE7.660e-4374.71Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5KES9_9PHAE6.100e-4274.71MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
Q7XAK2_9PHAE2.170e-4174.71Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D7FXE5_ECTSI1.230e-4074.71Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE3.890e-4073.56MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G339_ECTSI6.620e-4074.71Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI9.740e-4074.71Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE2.230e-3973.56Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ8_9PHAE5.890e-3972.41Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A8CEP1_SACJA2.290e-3872.41Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..87
e-value: 5.2E-27
score: 96.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11457contigH-paniculata_contig11457:4770..5897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11457.947.1mRNA_H-paniculata_contig11457.947.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11457 4770..5929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11457.947.1 ID=prot_H-paniculata_contig11457.947.1|Name=mRNA_H-paniculata_contig11457.947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MGEARMDIVDSEVGYLGYNDSESYGLTWKVRGFCTNGTNPEIFDTVNVYG
NIYNSKIHNNYFGIYTYGHQQGDWRENQMYDNIQYGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold