prot_H-paniculata_contig11276.816.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11276.816.1
Unique Nameprot_H-paniculata_contig11276.816.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig11276.816.1 vs. uniprot
Match: D7FQQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ7_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 3.790e-39
Identity = 75/86 (87.21%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 MSQESWIPMDLRMKMMRRSMAVIKENVDESMAQGQLVKKEKKRSNRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKV 86
            MS ESWIP DLRMKM+RR MAVIKENV ES+A G +V+KEKKRS+RSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKV
Sbjct:  204 MSHESWIPDDLRMKMVRRGMAVIKENVFESVAHGSVVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKV 289          
BLAST of mRNA_H-paniculata_contig11276.816.1 vs. uniprot
Match: A0A836CGB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.930e-20
Identity = 48/85 (56.47%), Postives = 66/85 (77.65%), Query Frame = 0
Query:    1 MSQESWIPMDLRMKMMRRSMAVIKENVDESMAQGQLVKKEKKRSNRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK 85
            +SQESWIP+DLRMKM+RRS++ + ++V E+ A  ++  K+  ++ R+ LEI K QE+FG +  RPCALCEQ FS VNLVLAVP+K
Sbjct:  242 LSQESWIPIDLRMKMLRRSISAVADSVSETAAWEKVRTKQAAKNARTSLEIAKEQERFGRECPRPCALCEQVFSSVNLVLAVPYK 326          
BLAST of mRNA_H-paniculata_contig11276.816.1 vs. uniprot
Match: A0A7S2LA26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA26_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 5.390e-6
Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 0
Query:    2 SQESWIPMDLRMKMMRRSMAVIKENVDESMAQGQLVKKEKKRSNRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK 85
            S+ESWIP DLR +M++R  +V K N +          +E +R     LE  +++EK+G + +R C LC++     NLVLAV  K
Sbjct:  254 SRESWIPEDLRRRMLKREFSVAKMNYETREKCQSSNLRELQRCKSDALEKSRSKEKYGIEIKRNCGLCDRPHLSENLVLAVTLK 337          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11276.816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQQ7_ECTSI3.790e-3987.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGB7_9STRA1.930e-2056.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2LA26_9STRA5.390e-638.10Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11276contigH-paniculata_contig11276:393..1020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11276.816.1mRNA_H-paniculata_contig11276.816.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11276 393..1029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11276.816.1 ID=prot_H-paniculata_contig11276.816.1|Name=mRNA_H-paniculata_contig11276.816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MSQESWIPMDLRMKMMRRSMAVIKENVDESMAQGQLVKKEKKRSNRSELE
IVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVSR*
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