prot_H-paniculata_contig11226.782.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11226.782.1
Unique Nameprot_H-paniculata_contig11226.782.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length220
Homology
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: D8LGP1_ECTSI (MutS protein homolog 1B MutS-like ATPases involved in mismatch repair, family 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP1_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 7.800e-113
Identity = 184/220 (83.64%), Postives = 197/220 (89.55%), Query Frame = 0
Query:    1 LQEEGRGAYVSEIGGRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEPVGNNMALDGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L +EGR AYVSEI GRFVIPV PTYKRTVGIVHDSSRTGKTL+VEP+Q VVGPTNELVE KL LKVETQRIL QMTLKIA++E++IL SL  AAEVDLALARGRL  K    IP V NEGTI L NARHPVLLLRGK PVGN+M+LD +MQ+L+LTGPNAGGKTVVLKTLGLVALMARAGIPIPA+PGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV
Sbjct:  230 LADEGREAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQ-VVGPTNELVEVKLQLKVETQRILSQMTLKIAEHEDEILQSLAAAAEVDLALARGRLGAKTGGTIPKVMNEGTIKLVNARHPVLLLRGKAPVGNSMSLDASMQALILTGPNAGGKTVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 448          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A6H5JAB7_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB7_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 9.670e-98
Identity = 167/220 (75.91%), Postives = 180/220 (81.82%), Query Frame = 0
Query:    1 LQEEGRGAYVSEIGGRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEPVGNNMALDGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L +EGR AYVSEI GRFVIPV PTYKRTVGIVHDSSRTGKTL+VEP+Q VVGPTNELVE                   IA++E++IL SL  AAEVDLALARGRL  K    IP V NEGTI L NARHPVLLLRGK PVGN+M+LD +MQ+L+LTGPNAGGKTVVLKTLGLVALMARAGIPIPA+ GARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV
Sbjct:  347 LADEGREAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQ-VVGPTNELVE-------------------IAEHEDEILQSLAAAAEVDLALARGRLGAKTGGTIPKVMNEGTIKLVNARHPVLLLRGKAPVGNDMSLDASMQALILTGPNAGGKTVVLKTLGLVALMARAGIPIPAAQGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 546          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A835YZI9_9STRA (Muts protein-like protein 1B muts-like ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI9_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.260e-92
Identity = 159/234 (67.95%), Postives = 180/234 (76.92%), Query Frame = 0
Query:    1 LQEEGRGAYVSEIGGRFVIPVRPTYKRT--------------VGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEPVGNNMALDGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L +EGRGAYVSE+ GRFV+PV+PTYKR               VGIVHD SRTGKTLF+EPS  VV PTNELVE KLALK E  RIL +MT+K+  N+  +L SL  AAEVDLA AR RL  ++   IP V +EG I L   RHPVL LRGK+PV N++ LD   Q+LVLTGPNAGGKTVVLKTLGLVALMARAGIP+PA+ GARVD+FDPVLADIGDLQSVTGDLSTFSGHL+V
Sbjct:  226 LADEGRGAYVSEVNGRFVLPVKPTYKRNGTCAAFCEAYDKRNVGIVHDVSRTGKTLFIEPSS-VVEPTNELVELKLALKAEEARILSRMTIKVGQNQRPLLASLSAAAEVDLACARARLGARLGGTIPEVGSEGAIRLRAVRHPVLALRGKDPVPNDLELDAASQALVLTGPNAGGKTVVLKTLGLVALMARAGIPVPAARGARVDVFDPVLADIGDLQSVTGDLSTFSGHLMV 458          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A4D9D3J8_9STRA (Smr domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 5.370e-69
Identity = 119/214 (55.61%), Postives = 161/214 (75.23%), Query Frame = 0
Query:    9 YVSEIGGRFVIPVRPTYKRT-VGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMK-AIIPTVRNEGTISLANARHPVLLLRGKEPVGNNMALDGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            Y+++  GRFV+P++ TYKR  +GIVHD S TG+T++VEP Q V+ PTN++   +L L  E  RI+G+MT  +A +++ IL SL+  A +D+++AR +L + M  A++P V  +G IS  +ARHPVLLLR + P+GN + +D     LVLTGPNAGGKT+VLKTLGL+AL+ R GIP+PA  G RVD F P+LADIGD+QSVTGDLSTFSGHL+V
Sbjct:  293 YIAQRNGRFVLPIKNTYKRAGLGIVHDQSNTGQTVYVEPVQ-VIEPTNDMKRLELELLQEEARIVGEMTRLVAVSKDQILRSLDAGALIDISVARAKLGDLMGGAVVPEVGTDGCISAEDARHPVLLLRNRNPIGNTLHIDPAKPGLVLTGPNAGGKTIVLKTLGLLALLVRLGIPVPARRGVRVDFFSPILADIGDMQSVTGDLSTFSGHLLV 505          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A7S2H3Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H3Q5_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.130e-67
Identity = 120/212 (56.60%), Postives = 156/212 (73.58%), Query Frame = 0
Query:   13 IGGRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEP----VGNNMALDGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            IG RFV+P++PT KR +GI+HD+SR+ KT++VEP+Q VV PTNEL E K+A++ E QRIL  M+  +  +   +  +L+ AAE DL+ AR  L + +   IP V NEG IS+   RHP+L LR        VGN++ L+  + SLVLTGPNAGGKTVVLK LGL AL+A+AGIP+PA+ GARVD+F  +LADIGD+QSV GDLSTFSGHL+V
Sbjct:   50 IGDRFVVPIKPTNKRGIGIIHDASRSAKTIYVEPAQ-VVEPTNELKEVKVAVRQEEQRILTTMSRLVYKHAGKLDSALDAAAETDLSTARFALGQLLNGTIPVVENEGVISVQACRHPLLQLRKGASKCNVVGNDLELNPEVPSLVLTGPNAGGKTVVLKLLGLCALLAKAGIPLPAADGARVDVFGTILADIGDMQSVGGDLSTFSGHLLV 260          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A7S3L824_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L824_9STRA)

HSP 1 Score: 223 bits (567), Expect = 9.140e-67
Identity = 120/229 (52.40%), Postives = 164/229 (71.62%), Query Frame = 0
Query:    1 LQEEGRGAYVSEI-GGRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRG-KEPVGNNMAL--DGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGA-----RVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L  E  GA  SE+ GGR VIPV P     +GIVHD+SR+GKT++VEP++ +VGPTNEL + +  L+ E  R+  Q+T +I  N++ +  S++   ++DL  AR RL + ++  +P V+ EG + L NA+HP+LLLRG    VG+++ L  DG  Q LVLTGPN+GGKT++LK LGLVALMARAGIP+PA+ G      RVD F+P+L+DIGD+QSV GDLSTFSGH++V
Sbjct:  278 LALESGGAVYSEVSGGRLVIPVEPKEASRIGIVHDTSRSGKTVYVEPTE-IVGPTNELRQVEAELRAEEARVWRQLTQQIVVNQDILRRSIQAVGQLDLVTARLRLGQALEGTVPLVQEEGVVDLRNAKHPILLLRGISNVVGSDVQLGADGN-QGLVLTGPNSGGKTIILKLLGLVALMARAGIPVPAASGTDDYKPRVDFFNPILSDIGDIQSVGGDLSTFSGHMLV 504          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A1E7FVZ7_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVZ7_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.340e-65
Identity = 120/235 (51.06%), Postives = 166/235 (70.64%), Query Frame = 0
Query:    1 LQEEGRGAYVSEIG-----GRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEPV-GNNMAL--DGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPG-------ARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L  E  G  +SE+      GR V+P+ P Y   +GIVHDSSR+GKT++VEPS+ +VGPTN+L   +  L+ E  R+   +T ++ +N+ D+  S++  A++DL +AR  L ++++ +IP V++EG ISL NA+HPVLLLR  E V G++++L  DG  Q LVLTGPN+GGKT++LK LGL+ALM+R+GIPIPA  G        RVD FDPVLADIGD+QSV  DLSTFSGH+ +
Sbjct:   91 LALESGGPLISEVASSNGAGRLVLPINPKYASALGIVHDSSRSGKTVYVEPSE-IVGPTNDLRVVERDLEAEEARVWRLLTEQVWNNQRDLRASVQAVAQLDLCVARYTLGQRLEGVIPDVQDEGIISLRNAKHPVLLLRKMEKVVGSDISLGVDGK-QGLVLTGPNSGGKTLILKLLGLLALMSRSGIPIPAEHGDMDGVYLPRVDFFDPVLADIGDIQSVDSDLSTFSGHMYI 323          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A7S4ENI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ENI8_9STRA)

HSP 1 Score: 220 bits (561), Expect = 3.080e-64
Identity = 121/236 (51.27%), Postives = 168/236 (71.19%), Query Frame = 0
Query:    1 LQEEGRGAYVSEI-------GGRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEPV-GNNMALDGT-MQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPG-------ARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L  E  G  VSE+       GGR V+P+ P Y   +GIVHDSSR+GKT++VEPS+ +VGPTNEL + +  L+ E  R+   +T ++ +N+ D+  S++  A++DL +AR +L ++++ +IP V++EG ISL +A+HP LLLR  E V G++++L     Q LVLTGPNAGGKTV+LK LGL+ALM+R+GIPIPA+ G        RVD F+PVLADIGD+QSV  DLSTFSGH++V
Sbjct:  389 LALESGGPLVSEVASNNGGTGGRLVLPINPKYASQLGIVHDSSRSGKTVYVEPSE-IVGPTNELRQIEHELEAEEARVWRSLTEQVWNNQYDLRKSVQAVAQLDLIVARCKLGQRLRGVIPIVKDEGVISLRDAKHPALLLRKFEKVVGSDISLGANGNQGLVLTGPNAGGKTVILKLLGLLALMSRSGIPIPAAYGDLNGEYQPRVDFFNPVLADIGDIQSVDSDLSTFSGHMLV 623          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A7S4T874_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T874_9STRA)

HSP 1 Score: 211 bits (538), Expect = 4.220e-64
Identity = 119/243 (48.97%), Postives = 162/243 (66.67%), Query Frame = 0
Query:    1 LQEEGRGAYVSEI-GGRFVIPVRPTYKRT-VGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEP-VGNNMAL-DGTMQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGA-------------------RVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L  E  G   SE+ GGR VIPV+  YK + VGI+HD SR+GKT+FVEP++ +VGPTNE+ + ++ L+ E  ++  Q+T ++  + +DI  S+    ++DL LAR RL + +  +IP V++EG +S+  A+HPVL+LR  E  VGN++ L D   Q LVLTGPN+GGKTV+LK +GL A M R GIP+PA+P                     RVD FDPVLADIGD+QSV GDLSTFSGH++V
Sbjct:   17 LALESGGPIFSEVNGGRIVIPVQDAYKNSGVGIMHDVSRSGKTVFVEPTE-IVGPTNEMKQVEVELRQEEAKVWRQLTEEVIKHRDDIERSVSSIVQIDLVLARMRLGDLLNGVIPVVKDEGVMSVREAKHPVLVLRELEDIVGNDIDLGDNGNQGLVLTGPNSGGKTVILKLMGLFAYMTRDGIPLPAAPACTSITVDEETGGEIMEEVVPRVDYFDPVLADIGDIQSVDGDLSTFSGHMLV 258          
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Match: A0A6V0BCP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0BCP0_9STRA)

HSP 1 Score: 220 bits (561), Expect = 9.930e-64
Identity = 121/236 (51.27%), Postives = 168/236 (71.19%), Query Frame = 0
Query:    1 LQEEGRGAYVSEI-------GGRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQVVGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLALARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEPV-GNNMALDGT-MQSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPG-------ARVDLFDPVLADIGDLQSVTGDLSTFSGHLVV 220
            L  E  G  VSE+       GGR V+P+ P Y   +GIVHDSSR+GKT++VEPS+ +VGPTNEL + +  L+ E  R+   +T ++ +N+ D+  S++  A++DL +AR +L ++++ +IP V++EG ISL +A+HP LLLR  E V G++++L     Q LVLTGPNAGGKTV+LK LGL+ALM+R+GIPIPA+ G        RVD F+PVLADIGD+QSV  DLSTFSGH++V
Sbjct:  473 LALESGGPLVSEVASNNGGTGGRLVLPINPKYASQLGIVHDSSRSGKTVYVEPSE-IVGPTNELRQIEHELEAEEARVWRSLTEQVWNNQYDLRKSVQAVAQLDLIVARCKLGQRLRGVIPIVKDEGVISLRDAKHPALLLRKFEKVVGSDISLGANGNQGLVLTGPNAGGKTVILKLLGLLALMSRSGIPIPAAYGDLNGEYQPRVDFFNPVLADIGDIQSVDSDLSTFSGHMLV 707          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11226.782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGP1_ECTSI7.800e-11383.64MutS protein homolog 1B MutS-like ATPases involved... [more]
A0A6H5JAB7_9PHAE9.670e-9875.91DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A835YZI9_9STRA2.260e-9267.95Muts protein-like protein 1B muts-like ATPase n=1 ... [more]
A0A4D9D3J8_9STRA5.370e-6955.61Smr domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2H3Q5_9STRA1.130e-6756.60Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3L824_9STRA9.140e-6752.40Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A1E7FVZ7_9STRA2.340e-6551.06p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4ENI8_9STRA3.080e-6451.27Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S4T874_9STRA4.220e-6448.97Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A6V0BCP0_9STRA9.930e-6451.27Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 154..215
e-value: 9.8E-9
score: 35.5
NoneNo IPR availableGENE3D3.40.50.300coord: 112..219
e-value: 3.4E-27
score: 97.2
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 16..218
IPR005747Endonuclease MutS2PANTHERPTHR11361:SF14DNA MISMATCH REPAIR PROTEIN MUTS, TYPE 2coord: 16..218
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 113..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11226contigH-paniculata_contig11226:790..7288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11226.782.1mRNA_H-paniculata_contig11226.782.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11226 790..7288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11226.782.1 ID=prot_H-paniculata_contig11226.782.1|Name=mRNA_H-paniculata_contig11226.782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
LQEEGRGAYVSEIGGRFVIPVRPTYKRTVGIVHDSSRTGKTLFVEPSQQV
VGPTNELVEAKLALKVETQRILGQMTLKIADNEEDILLSLEKAAEVDLAL
ARGRLAEKMKAIIPTVRNEGTISLANARHPVLLLRGKEPVGNNMALDGTM
QSLVLTGPNAGGKTVVLKTLGLVALMARAGIPIPASPGARVDLFDPVLAD
IGDLQSVTGDLSTFSGHLVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR005747MutS2
IPR027417P-loop_NTPase