prot_H-paniculata_contig11202.766.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11202.766.1
Unique Nameprot_H-paniculata_contig11202.766.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length390
Homology
BLAST of mRNA_H-paniculata_contig11202.766.1 vs. uniprot
Match: A0A6H5K899_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K899_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.330e-55
Identity = 111/298 (37.25%), Postives = 154/298 (51.68%), Query Frame = 0
Query:   35 YTLHVKTCNTTFAGTANKVQLSFCSEKSS-CEDEPKNNYNEYGQLSKSGIWNSLHVPLDYEPDTMTVYMDSTDSWCMEQIVWQNGQNLLGKGAHIYLDGDLGIPGCQFGVHVNYTLGTMYPCQTTWQIFNLQGSDDFKYDLGVKAC-PGTRSG---------------------RALATICSESTCNDALGEVVERNLTM-----------------GRGEGRWTHWKIAIGFNPAAM-LWTATEGEWCATEAVFNGFQLIGKNDPPVRLG-GIQSYRLFHNLQYHGPAPGDRGENSG 290
            +TL V+TCN T AG+ ++V LSFC      C   P+N YN   +L++ G W    +PL +EP  M++ M   D+WC ++++W  G NLLG G  +YLDGDLG  GC +GVH  +  G  YPCQ++W+ FNLQGSDD++Y++ VK C   T SG                     R LA++CSES C++ +GEVV   L                   G G G W   +    FNP AM L    +  WCA E  FN + L+ +   P  +  G+   RLF N+Q  G   G   ++ G
Sbjct:  134 FTLEVRTCNETNAGSLDEVHLSFCDGGGDDCVMGPENVYNSVAELAEIGTWTPFEIPLAFEPTAMSMSMVGIDAWCFDEVIWNGGTNLLGSGGRVYLDGDLGKKGCNYGVH--FDTGWFYPCQSSWRFFNLQGSDDYEYEIKVKPCGSATSSGXXXXXXXXXXXXXXXXXXXSSRILASLCSESECDETVGEVVNVTLAAEPSHRHGXXXXXXTSRAGSG-GDWATTRTPATFNPVAMRLTNVGDFPWCAEEVAFNEYTLVNRFASPHGMKLGVGDDRLFFNVQSLGLLAGASSDDPG 428          
BLAST of mRNA_H-paniculata_contig11202.766.1 vs. uniprot
Match: D7G1J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J9_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 6.230e-52
Identity = 116/327 (35.47%), Postives = 164/327 (50.15%), Query Frame = 0
Query:   17 AVFYLISAAGYT---NGYMTGYTLHVKTCNTTFAGTANKVQLSFCSEKSS-CEDEPKNNYNEYGQLSKSGIWNSLHVPLDYEPDTMTVYMDSTDSWCMEQIVWQNGQNLLGKGAHIYLDGDLGIPGCQFGVHVNYTLGTMYPCQTTWQIFNLQGSDDFKYDLGVKACPG-TRSGRA---------------------LATICSESTCNDALGEVVERNLTMGRGEGR--------------WTHWKIAIGFNPAAM-LWTATEGEWCATEAVFNGFQLIGKNDPPVRLG-GIQSYRLFHNLQYHGPAPGDRGENSGIIESIVYVAGE 301
            ++F L+  AG+T      +  YTL V+T N T AG+ ++V LSFC      C   P+N YN   +L++ G   +  +PL YEP  M++ +   D+WC ++ +W  G NLLG GA +YLDGDLG  GC +GVH  +  G  YPCQ+ W+ FNL GSDD++Y++ VK C   T SG A                     LA++CSES C++  GEVV   L     +G               W   +    FNP AM L    +  WCA E  FN + L+ +   P  +   +   RLF N+Q  G   GD  ++ G  +   Y+ GE
Sbjct:   29 SLFLLLLLAGWTFPATAAIQPYTLEVRTRNATNAGSLDEVHLSFCDGGGDDCVMGPENVYNSMAELAEIGTRATFEIPLAYEPTAMSISIVGIDAWCFDEAIWNGGTNLLGSGARVYLDGDLGEKGCNYGVH--FDTGWFYPCQSRWRFFNLPGSDDYEYEIKVKPCDSATPSGSASLSQQEEEAAAVRESSASTKILASLCSESECDETAGEVVNVTLAAEPAQGXXXXXXXXXXXXXXDWATTRTPATFNPVAMRLTNVGDLPWCAEEVAFNEYTLVNRYASPHGMKLDVGDDRLFFNVQSLGLLAGDSSDDPGGSDDD-YIKGE 352          
BLAST of mRNA_H-paniculata_contig11202.766.1 vs. uniprot
Match: A0A6H5JRD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD2_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 5.000e-36
Identity = 103/321 (32.09%), Postives = 147/321 (45.79%), Query Frame = 0
Query:   34 GYTLHVKTCNTTFAGTANK-VQLSFCSEKSSC-----EDEPKNNYNEYGQLSKSGIWNSLHVPLDYEPDTMT------VYMDSTDSWCMEQIVWQNGQNLLGKGAHIYLDGDLGIPGCQFGVHVNYTLGTMYP-----CQTTWQIFNLQGSDDFKYDLGVKACPGTRSGRALATICSESTCN-DALGEVVERNLTMGRGEGRWTHWKIAIGFNPAAMLWTATEGE--WCATEAVFNGFQLIGKNDPPVRLGGIQSYRLFHNLQYHGPAPGDRGENSGIIESI---------VYVAGEVVIAVLSAFILAFMGGFAKHLYRR 325
            GY+L V  CN+T++GT +  ++  FC   S C     ED+            +S I   + +   YEP T+       V     DSWC++++ W++G NLLG+  + +L+      GC  G+    T G + P     C   W+ FN+ G  ++KYD+ VKAC GT     LA  CS S C+  A+GE     L M   EG WT     + FNP A+   A +G+  WCA E  FNG+ LI  N   V   G Q   +F N+Q +G  P           S          +  A EV + V+ A ++A   G     YRR
Sbjct:   19 GYSLKVTACNSTYSGTPDDDIKFHFCDGGSYCILGDAEDDDWVGLQGNSISDRSTI--EIAIAPGYEPTTIEFRKGFGVEDPGQDSWCIDRVTWEDGDNLLGEDGYFFLEHQNEAMGCINGIAD--TTGWVDPTEKVACMKKWRFFNINGQSEYKYDVRVKACAGTSLSIVLAYFCSNSNCDRGAIGEEWPERLEMNDVEGGWTDVSFYLPFNPLAVRLEAADGDDAWCADELFFNGYSLI-TNMTKVETEGFQ---IFPNIQENGQTPAPTXXXVDASASTKEESDDPKWLDAAWEVTVTVIGAVVVAAGAGCFARAYRR 331          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11202.766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K899_9PHAE1.330e-5537.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1J9_ECTSI6.230e-5235.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRD2_9PHAE5.000e-3632.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 320..389
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 295..319
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableTMHMMTMhelixcoord: 296..318
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11202contigH-paniculata_contig11202:601..5793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11202.766.1mRNA_H-paniculata_contig11202.766.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11202 554..7587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11202.766.1 ID=prot_H-paniculata_contig11202.766.1|Name=mRNA_H-paniculata_contig11202.766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=390bp
MSSRKESMVTTSLVVLAVFYLISAAGYTNGYMTGYTLHVKTCNTTFAGTA
NKVQLSFCSEKSSCEDEPKNNYNEYGQLSKSGIWNSLHVPLDYEPDTMTV
YMDSTDSWCMEQIVWQNGQNLLGKGAHIYLDGDLGIPGCQFGVHVNYTLG
TMYPCQTTWQIFNLQGSDDFKYDLGVKACPGTRSGRALATICSESTCNDA
LGEVVERNLTMGRGEGRWTHWKIAIGFNPAAMLWTATEGEWCATEAVFNG
FQLIGKNDPPVRLGGIQSYRLFHNLQYHGPAPGDRGENSGIIESIVYVAG
EVVIAVLSAFILAFMGGFAKHLYRRICRSQGQMRNTVGDIRPMQKVVIEE
DAYGSGRLLLARSLSDSSGGGESVWQRAPYDNPPFSLPL*
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