prot_H-paniculata_contig11172.754.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11172.754.1
Unique Nameprot_H-paniculata_contig11172.754.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11172.754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 23..56
e-value: 2.7E-6
score: 36.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 23..56
score: 11.092
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..69
e-value: 2.4E-20
score: 74.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..69
NoneNo IPR availablePFAMPF13414TPR_11coord: 30..69
e-value: 8.9E-14
score: 50.9
NoneNo IPR availablePANTHERPTHR44366:SF1UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNITcoord: 2..69
IPR037919UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunitPANTHERPTHR44366FAMILY NOT NAMEDcoord: 2..69
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..70
score: 20.882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11172contigH-paniculata_contig11172:6109..6714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11172.754.1mRNA_H-paniculata_contig11172.754.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11172 6109..6714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11172.754.1 ID=prot_H-paniculata_contig11172.754.1|Name=mRNA_H-paniculata_contig11172.754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MQGLIKEAIHCYVTAVRLMPKFAAVHSNLGSVLKEQGKLDHALAHYHEAI
AIDPTFADAYSNMGNAYKDL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR037919OGT
IPR013026TPR-contain_dom