prot_H-paniculata_contig1117.749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1117.749.1
Unique Nameprot_H-paniculata_contig1117.749.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length799
Homology
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI)

HSP 1 Score: 813 bits (2099), Expect = 9.310e-282
Identity = 516/764 (67.54%), Postives = 559/764 (73.17%), Query Frame = 0
Query:   41 VVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRD--------VQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKK-QMEDGIIDAATPGKGAATCRNTSVKYSSMEAS------------VKVFASAFRRLKKKKKSASLF---SVPVRVPLAGEELKAFRDEENRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVASLFSKYSKPQQLMFGYHDPQVPMDEYGVKETEPIGWLAAAMQQHNSEMPAAMEEEGAARGKLKVKDGKFVLDKGDTKGGIKESKDQLDGGAEEGKRSAANRSSTGEAVEDDEERKAAGEDADXXXXXXXXXXXXXXXGSKEGPMDALRMGAAGGKESAFFQDSGAVPTKLENEEQEVEIRCRVEYVDYEGLSDGRSIKNTVLNLAPKMLVVFGGSSRAKDWLVTHIQTRLIDDSSSTKR 780
            VVFTPLYGCDE  +GV PV S+LEVGGVTI+LDCGWDIHFDTALLEPLR VV R+DLVLISHPDLEHLG LPYAFGKLGMRA+VYATLP WKMGQM VYDAY+SRTHEGNF AFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDI+YATAYN+  ERHLR SAL  LTRP+VLITDAHNAL            K K RE +L+S +MDTVRGGGNVLLPTDTAGRVLELLVLL++YW KHRLGSYKLVLLHNTAFNT EFAKSQLEWMS DIGRAFDLQRSNPFEL NVHI+HSLEELDELGDDP+VV+ATD SLDFGFSKALLLRWASG ANTILLTGRGHG++TA  L+   + +  +    AA     AA  R   V YS    +                             AS+    +VPVRVPLAGEELKAFRDEENR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       AIVASLFSKYSKPQ LMFGY+DP VP DEYGVKETEPIGWLAAAMQQ NSEMPAAM                                                                      XXXXXXXXXXXXXXX   E  +DALR  A  GKESAFFQDSGAVPTKLE E QE+E+ CRV YVD EGLSDG S+KNT + LAPKML+V GGS RAK  LV++++   ++ +++ +R
Sbjct:  127 VVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAAAAGRGARVGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVPVTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRR---AIVASLFSKYSKPQHLMFGYYDPHVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXEPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVTLAPKMLIVTGGSRRAKAELVSYVR-HAVEPAAAGRR 860          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA)

HSP 1 Score: 587 bits (1512), Expect = 2.400e-195
Identity = 376/749 (50.20%), Postives = 463/749 (61.82%), Query Frame = 0
Query:   40 DVVFTPLYGC-DENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGN--FDAFDLDDVDAAFARFKTLKFSQHLTFS--GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKP-KARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKKQMEDGIIDAATPGKGAATCRNTSVKYSSMEASVKVFASAFRRLKKKKKSASLFSVPVRVPLAGEELKAFRDEENRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVASLFSKYSKPQQLMFGYHDPQVPMDEYGVKETEPIGWLAAAMQQHNSEMPAAMEEEGAARGKLKVKDGKFVLDKGDTKGGIKESKDQLDGGAEEGKRSAANRSSTGEAVEDDEERKAAGEDADXXXXXXXXXXXXXXXGSKEGPMDALRMGAAGGKESAFFQDSGAVPTKLENEEQEVEIRCRVEYVDYEGLSDGRSIKNTVLNLAPKMLVVFGGSSRAKDWLVTHIQTRLIDDSSSTKRGG 782
            DV FTPLYGC D+   G GPVCSLLEVG VTI+LDCGWDI FD +LL PL SVVSRVDLVLISH DLEHLG LPYA GKLG++A V+ATLP  KMGQMTVYDA+  R+ E N  F AF LDD DAAF RF+ LK+SQHL FS  GRGAGVTITPYAAG +IG ++WR+ WQT+DNDI+YA +YNH+ E HL   A+  L+RP+++ITDAH  L    KP + R + L  ++  TVR GGNVLLP DTAGRVLELL+LLD +W +++LGSY LVLLH+ AFNT EFAKSQLEWMS+ I + FDLQRSNPFE+ +V + HSLEEL  LG  P VVLATD SLDFGF+KALLL WA+   N +LLT RGHGDS A +LL   + +   +  AA  G                             +++  K   +  VP RVPL GEEL A+  EE   XXXXXXXXXXXXXX             XXXXXXXXXX            + ASLFSK+SKPQ LMFG+HD  V +D+YGV+E EPI WLA +MQ+ N +    + EEG  R          +L++  T                     AA+ SS  + V           DAD                +      ALR       +SAF++D+G +P+K+  +E+E+ +R RV Y+D EGLSDGRS++N +  + P+ LV+ GGS +A   L    + R I  +  T R G
Sbjct:   47 DVTFTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQLEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELL---RGVTAHVRAAAAAGG----------------------------VEEAPKQRIVVEVPERVPLVGEELTAYL-EEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHDAMVEVDDYGVREAEPIAWLAVSMQERN-DTSGLIHEEGQRR----------LLEQQAT---------------------AAHLSSAMQVV--------GLSDADGAVSA-----------ATAAAQTALRS------DSAFYEDTGVLPSKVVLQERELVVRARVAYIDMEGLSDGRSVRNLLATVGPRQLVLVGGSVKAVSALSEDARDRHICSAVFTPRSG 706          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD)

HSP 1 Score: 360 bits (925), Expect = 1.550e-109
Identity = 181/371 (48.79%), Postives = 257/371 (69.27%), Query Frame = 0
Query:   41 VVFTPLYGCDENISGVGPVCS-LLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTH-EGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409
            + FTPLYG    +    P C+ LLE+  V I+LDCGW   +DT LL+PL+ V+ R+DLVLISH DL H+GALPYA GKLG++A +Y TLP  +MGQ+ +YDAY ++T  +G+F  F LDDVDA F  FK LK+S+ LT +  G G+ ITP+ AG +IG ++WR+  +T+D  IIYA  YNH+ E  L+ + L   TRP +LITD+ N   +  K K R++K+M  I+ TVRGGGNVL+PTD++GRVLEL+ +LD+YW +++L    + LLH+ ++ T + A++ LEW +  I + FD+ R NPF+  ++H+IHSLEELD L   P+VVL T +SL+ GF+K L +RWAS + N+I+ T     +S A  ++
Sbjct:    4 ITFTPLYG----VHSSDPCCAYLLEIDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRIEKETDD--IIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNIHSEQPKLKDRDSKIMVEILKTVRGGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNERIAKNFDVGRQNPFQFSHIHLIHSLEELDNL-PSPKVVLTTSSSLECGFAKDLFIRWASDQRNSIIFTCTSAPNSFATRVI 366          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO)

HSP 1 Score: 359 bits (922), Expect = 3.230e-109
Identity = 178/374 (47.59%), Postives = 244/374 (65.24%), Query Frame = 0
Query:   43 FTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKKQME 416
            F PL G    + G  P+C LLEV     +LDCGWD   +   L+ L + V +VD VL+SH D +HLGALPYA GKLG+   VYATLP  KMGQM +YD YLS+  E  ++ F+L+DVD AF  F  ++++Q +  +G+G G+TITP+ AG  +G   WR++ + ED  I+YA  YNH+ ERHL  +AL    RP VLITDA+N L +    K R+  L++ +M T+R GGNVL+P DTA RVLELL++LD +W   ++G Y LVLL+N A+N  EFAKS LE+M++DI ++F+  R N F+  NVH+ HSLEEL+EL D P+VVLA+  SL+ G  + LL+ WAS   N IL   R    + ++ +  +    E
Sbjct:   18 FVPLCG----VHGQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGTLSSFIQTYMDSDE 385          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC)

HSP 1 Score: 358 bits (919), Expect = 5.730e-108
Identity = 182/370 (49.19%), Postives = 245/370 (66.22%), Query Frame = 0
Query:   41 VVFTPLYGCDENISGVG--PVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDL 408
            + F+PLYG    + G+G  P C +L++ G  I+LDCGW+  FD  LLEPL  V + VD VLISHPD EHLGALPYAFGKLGMR +VYATLP  KMG M +YD +LSR    +F  F LDD+D AF+ F  ++++Q     G GAG+TITPYAAG M+G A+W+V  +T+D  ++YA  +NH+ E+HL  + L  + RP VLITDA NA R +   K RE  L+  I+ TVR  GNVL+P D AGRVLELL++L+E W + +L +Y+LVLL   A+NT EFA+S LEWM   +G+ FD +R N F   ++ + HS++E   L   P+VVLA+  SLD G S+ + + WA    N I+ T R    S + ++
Sbjct:    8 IKFSPLYG----VQGIGEDPFCYVLDLDGFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKHLNGTVLESIKRPAVLITDASNARR-LPPSKTRENDLIEAILRTVRQDGNVLIPIDPAGRVLELLLVLEERWSQKQLAAYQLVLLTKVAYNTLEFARSHLEWMGEHVGQYFDRERHNAFNTRHLKLCHSIDEFRALPQGPKVVLASFGSLDAGASRHIFVEWAPDPRNLIVFTDRLQPGSLSREV 370          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA)

HSP 1 Score: 356 bits (914), Expect = 7.520e-108
Identity = 184/373 (49.33%), Postives = 244/373 (65.42%), Query Frame = 0
Query:   41 VVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKK 413
            + F+PL G         P+C LLE+    I+LDCGW+  +D  LL+PL+ VV +++ VLISHPDL HLGALPYA GKLG++A++  T+P +KMGQM +YDAY SR +   F  F+LDDVDAAF  F  LK+SQ  T SG+G  + ITPYAAG +IG  +W++  +T++  IIYA  YNHK ERHL P+ L  LT+P +LITDA NAL        R++ L+  I  T+R GGNVLLP DTAGRVLELLV+LD++W  H   SY L+ L+N A+NT EFAKSQLEWMS  I   F   R N F+  NV + H   E++E    P+VVLA+ +SL+ GF++ + + W S   N I+ T      + A  L+ + K
Sbjct:    5 IKFSPLCGAYNE----DPLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHW-SHFHYSYPLLFLNNVAYNTIEFAKSQLEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEF-PSPKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRLMENPK 369          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: M4C192_HYAAE (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C192_HYAAE)

HSP 1 Score: 353 bits (905), Expect = 5.800e-107
Identity = 177/371 (47.71%), Postives = 253/371 (68.19%), Query Frame = 0
Query:   41 VVFTPLYGCDENISGVGPVCS-LLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRT-HEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409
            + FTPLYG    +    P C+ LLEV  V I+LDCGW   +D  +L+PL+ VV R+DLVL+SH DL H+GALPYA GKLG+ A +Y TLP  +MGQ+ +YDA+ ++T HE +F  F LDDVD  F +F+ LK+S+ LT +  G G+ ITP+ AG +IG A+WR+  +T+D  IIYA  YNH+ E  L+ + L   TRP +LITD+ N  R+  K K R++K+M  I+ TVR GGNVL+PTD++GRVLEL+ +LD+YW +++L    + LLH+ ++ T + A++ LEW ++ I + FD+ R NPF+  ++H++H+LEELD L   P+VVLAT  +L+ GF+K + +RWA    NTI+ T      S A  +L
Sbjct:    4 ITFTPLYG----VHSSAPCCAYLLEVDDVCILLDCGWTDEYDVEILKPLQRVVDRIDLVLVSHLDLAHMGALPYAMGKLGLNAPIYGTLPVHRMGQIALYDAFQAKTKHESDFALFSLDDVDLVFEKFQQLKYSEKLTLTSSGEGIVITPHVAGHLIGGALWRIVKETDD--IIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNLHREQPKLKDRDSKIMMEILKTVRNGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNDRIAKNFDVGRQNPFQFSHIHLVHTLEELDAL-PSPKVVLATSPNLECGFAKDIFIRWAPDPRNTIIFTSTTPETSFAYRVL 366          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A2R6XNT6_MARPO (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XNT6_MARPO)

HSP 1 Score: 353 bits (907), Expect = 6.990e-107
Identity = 180/372 (48.39%), Postives = 240/372 (64.52%), Query Frame = 0
Query:   37 GLRDVVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDL 408
            G   V  TPL G         P+C LLEV G   +LDCGW   FD A L+PL SV S +D VL+S+PD  HLGALPYA G LG+ A VY TLP  +MGQM +YD YLSR    NFD F+LDDVD AF     LK+SQH    G+G G+TITPYAAGR++G  VW+++  TED  IIYA  +NH+ ERHL  + L    RP VLITD++NAL +    K R+ + + ++M  +R GGNVLLP +TAGRVLEL++ LD+ W   +L +Y + LL N +++T EFAKS LEWMS+ I ++F+  R N F L  + + H+ ++LD+L   P+VV A+  SL+ GF++ L + WA+   N +L T RG   + +  L
Sbjct:   18 GSSSVQITPLSGAHSE----SPLCYLLEVDGFRFLLDCGWTDAFDVAQLQPLASVASTIDAVLLSYPDTMHLGALPYAVGNLGLTATVYCTLPVHRMGQMYMYDHYLSRRAVSNFDLFNLDDVDTAFGNSVQLKYSQHHLLQGKGEGITITPYAAGRLLGGTVWKITVDTED--IIYAVDFNHRKERHLNGTVLQSFVRPAVLITDSYNALNNQPLQKQRDAEFLDVVMKALRAGGNVLLPVETAGRVLELVLYLDKCWAGDKL-NYPMALLTNVSYSTLEFAKSLLEWMSDAIAKSFEHTRDNSFVLKYLKLCHTRKDLDDLPAGPKVVFASMASLEAGFARELFVEWATDPNNLVLFTERGQVGTLSRKL 382          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: UPI00155AE16F (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 n=1 Tax=Drosophila subobscura TaxID=7241 RepID=UPI00155AE16F)

HSP 1 Score: 342 bits (877), Expect = 2.650e-106
Identity = 165/354 (46.61%), Postives = 239/354 (67.51%), Query Frame = 0
Query:   58 PVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLG--SYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409
            P C +L++  V I+LDCGWD  FD   ++ L+  V  +D VL+SHPD  HLGALPY  GKLG+   +YAT+P +KMGQM +YD Y+S  + G+FD F LDDVD AF +   LK++Q ++  G+G G++ITP  AG MIG  +W++  +  + DI+YAT +NHK ERHL    L +L RP++LITDA+NA     + +AR+ KLM+ I+ TVR  GNVL+  DTAGR+LEL  +LD+ W     G  +Y L LL+N ++N  EFAKSQ+EWMS+ + +AF+  R+NPF+  ++ + H+L ++ +L   P+VVLA+   L+ GF++ L ++WAS   N+I+LT R    + A DL+
Sbjct:   18 PPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAADTAGRMLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVVEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHTLADVYKLPAGPKVVLASTPDLESGFTRDLFIQWASNANNSIILTTRTSPGTLAMDLV 370          
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A7S0WC87_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WC87_9CHLO)

HSP 1 Score: 350 bits (897), Expect = 6.260e-105
Identity = 184/394 (46.70%), Postives = 253/394 (64.21%), Query Frame = 0
Query:   19 ATSAQAVAKNGSSGVK--QKGLRDVVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNF-DAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409
            AT+  AVA+  S   K  ++G + V+ TPLYG    + G  P+C  + + G  I+LDCGW+  FD  LL PL ++   +D VLISHPD  HLGALPYAFGKLGM  +VYATLP  KMGQM +YD +L+R  + +F + F LDDVD AFA F  +KF Q     G+G G+T+T YAAG  +G AVW++    ED  ++YA  YN + ERHL  +A   + RP +LITDA N  R V     R+ +L   I+ +VR  GNVL+P D AGRVLEL++LL+E W + +LGSY+++LL N A+NT +FAKS LEWM   +  AF+ +R NPF+   + + HS+EEL  L   P+VVLA+  SL+ G ++ L   WA   +N ++LTG+    S + ++L
Sbjct:    6 ATALDAVAEGESVKAKTVERGNK-VLVTPLYG----VKGEQPMCYHVSIDGCNILLDCGWNDQFDVDLLAPLAAIAPTIDAVLISHPDTAHLGALPYAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTRQDQCDFQETFSLDDVDTAFAAFVPVKFMQLSMLRGKGEGITVTAYAAGHTLGGAVWKIGKDAED--VVYAVDYNVRKERHLNGTAFDAIHRPALLITDACNVGRAVPNKATRDAQLTEAILSSVRKNGNVLIPIDPAGRVLELILLLEEKWAQRQLGSYQIILLTNVAYNTIDFAKSHLEWMGEGVTTAFERKRENPFDTKFLTLCHSMEELKALPAGPKVVLASFGSLEAGPARHLFAEWADNASNLVILTGQPEPGSLSEEVL 392          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA4_ECTSI9.310e-28267.54Cleavage and polyadenylation specificity factor su... [more]
A0A836CFV8_9STRA2.400e-19550.20Cleavage and polyadenylation specificity factor su... [more]
K3WHC0_GLOUD1.550e-10948.79Cleavage and polyadenylation specificity factor su... [more]
A0A6U9RRA8_9CHLO3.230e-10947.59Cleavage and polyadenylation specificity factor su... [more]
C1FDL7_MICCC5.730e-10849.19Cleavage and polyadenylation specificity factor su... [more]
A0A6B2KYM6_9EUKA7.520e-10849.33Cleavage and polyadenylation specificity factor su... [more]
M4C192_HYAAE5.800e-10747.71Cleavage and polyadenylation specificity factor su... [more]
A0A2R6XNT6_MARPO6.990e-10748.39Cleavage and polyadenylation specificity factor su... [more]
UPI00155AE16F2.650e-10646.61probable cleavage and polyadenylation specificity ... [more]
A0A7S0WC87_9CHLO6.260e-10546.70Cleavage and polyadenylation specificity factor su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 475..514
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 284..408
e-value: 1.2E-24
score: 97.9
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 284..407
e-value: 4.0E-17
score: 62.5
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 49..294
e-value: 3.8E-70
score: 237.9
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 53..769
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 62..238
e-value: 6.0E-54
score: 182.4
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR45922FAMILY NOT NAMEDcoord: 41..770

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1117contigH-paniculata_contig1117:76..21259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1117.749.1mRNA_H-paniculata_contig1117.749.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1117 76..21259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1117.749.1 ID=prot_H-paniculata_contig1117.749.1|Name=mRNA_H-paniculata_contig1117.749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=799bp
MTAATQHAIGVAVEKGFAATSAQAVAKNGSSGVKQKGLRDVVFTPLYGCD
ENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLI
SHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGN
FDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVW
RVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDV
QKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRL
GSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHII
HSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGH
GDSTANDLLIHKKQMEDGIIDAATPGKGAATCRNTSVKYSSMEASVKVFA
SAFRRLKKKKKSASLFSVPVRVPLAGEELKAFRDEENRKRRLEAEEEEAR
RQAAAMEKEQVIADSDDEGEGGGGAAATSEPTQKKRRAIVASLFSKYSKP
QQLMFGYHDPQVPMDEYGVKETEPIGWLAAAMQQHNSEMPAAMEEEGAAR
GKLKVKDGKFVLDKGDTKGGIKESKDQLDGGAEEGKRSAANRSSTGEAVE
DDEERKAAGEDADEDGQEDDDNDNGIDDGSKEGPMDALRMGAAGGKESAF
FQDSGAVPTKLENEEQEVEIRCRVEYVDYEGLSDGRSIKNTVLNLAPKML
VVFGGSSRAKDWLVTHIQTRLIDDSSSTKRGGARTGLAGGGGGGAGAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Metallo-B-lactamas
IPR027075CPSF2