prot_H-paniculata_contig1117.749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI) HSP 1 Score: 813 bits (2099), Expect = 9.310e-282 Identity = 516/764 (67.54%), Postives = 559/764 (73.17%), Query Frame = 0 Query: 41 VVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRD--------VQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKK-QMEDGIIDAATPGKGAATCRNTSVKYSSMEAS------------VKVFASAFRRLKKKKKSASLF---SVPVRVPLAGEELKAFRDEENRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVASLFSKYSKPQQLMFGYHDPQVPMDEYGVKETEPIGWLAAAMQQHNSEMPAAMEEEGAARGKLKVKDGKFVLDKGDTKGGIKESKDQLDGGAEEGKRSAANRSSTGEAVEDDEERKAAGEDADXXXXXXXXXXXXXXXGSKEGPMDALRMGAAGGKESAFFQDSGAVPTKLENEEQEVEIRCRVEYVDYEGLSDGRSIKNTVLNLAPKMLVVFGGSSRAKDWLVTHIQTRLIDDSSSTKR 780 VVFTPLYGCDE +GV PV S+LEVGGVTI+LDCGWDIHFDTALLEPLR VV R+DLVLISHPDLEHLG LPYAFGKLGMRA+VYATLP WKMGQM VYDAY+SRTHEGNF AFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDI+YATAYN+ ERHLR SAL LTRP+VLITDAHNAL K K RE +L+S +MDTVRGGGNVLLPTDTAGRVLELLVLL++YW KHRLGSYKLVLLHNTAFNT EFAKSQLEWMS DIGRAFDLQRSNPFEL NVHI+HSLEELDELGDDP+VV+ATD SLDFGFSKALLLRWASG ANTILLTGRGHG++TA L+ + + + AA AA R V YS + AS+ +VPVRVPLAGEELKAFRDEENR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AIVASLFSKYSKPQ LMFGY+DP VP DEYGVKETEPIGWLAAAMQQ NSEMPAAM XXXXXXXXXXXXXXX E +DALR A GKESAFFQDSGAVPTKLE E QE+E+ CRV YVD EGLSDG S+KNT + LAPKML+V GGS RAK LV++++ ++ +++ +R Sbjct: 127 VVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAAAAGRGARVGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVPVTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRR---AIVASLFSKYSKPQHLMFGYYDPHVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXEPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVTLAPKMLIVTGGSRRAKAELVSYVR-HAVEPAAAGRR 860
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA) HSP 1 Score: 587 bits (1512), Expect = 2.400e-195 Identity = 376/749 (50.20%), Postives = 463/749 (61.82%), Query Frame = 0 Query: 40 DVVFTPLYGC-DENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGN--FDAFDLDDVDAAFARFKTLKFSQHLTFS--GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKP-KARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKKQMEDGIIDAATPGKGAATCRNTSVKYSSMEASVKVFASAFRRLKKKKKSASLFSVPVRVPLAGEELKAFRDEENRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVASLFSKYSKPQQLMFGYHDPQVPMDEYGVKETEPIGWLAAAMQQHNSEMPAAMEEEGAARGKLKVKDGKFVLDKGDTKGGIKESKDQLDGGAEEGKRSAANRSSTGEAVEDDEERKAAGEDADXXXXXXXXXXXXXXXGSKEGPMDALRMGAAGGKESAFFQDSGAVPTKLENEEQEVEIRCRVEYVDYEGLSDGRSIKNTVLNLAPKMLVVFGGSSRAKDWLVTHIQTRLIDDSSSTKRGG 782 DV FTPLYGC D+ G GPVCSLLEVG VTI+LDCGWDI FD +LL PL SVVSRVDLVLISH DLEHLG LPYA GKLG++A V+ATLP KMGQMTVYDA+ R+ E N F AF LDD DAAF RF+ LK+SQHL FS GRGAGVTITPYAAG +IG ++WR+ WQT+DNDI+YA +YNH+ E HL A+ L+RP+++ITDAH L KP + R + L ++ TVR GGNVLLP DTAGRVLELL+LLD +W +++LGSY LVLLH+ AFNT EFAKSQLEWMS+ I + FDLQRSNPFE+ +V + HSLEEL LG P VVLATD SLDFGF+KALLL WA+ N +LLT RGHGDS A +LL + + + AA G +++ K + VP RVPL GEEL A+ EE XXXXXXXXXXXXXX XXXXXXXXXX + ASLFSK+SKPQ LMFG+HD V +D+YGV+E EPI WLA +MQ+ N + + EEG R +L++ T AA+ SS + V DAD + ALR +SAF++D+G +P+K+ +E+E+ +R RV Y+D EGLSDGRS++N + + P+ LV+ GGS +A L + R I + T R G Sbjct: 47 DVTFTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQLEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELL---RGVTAHVRAAAAAGG----------------------------VEEAPKQRIVVEVPERVPLVGEELTAYL-EEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHDAMVEVDDYGVREAEPIAWLAVSMQERN-DTSGLIHEEGQRR----------LLEQQAT---------------------AAHLSSAMQVV--------GLSDADGAVSA-----------ATAAAQTALRS------DSAFYEDTGVLPSKVVLQERELVVRARVAYIDMEGLSDGRSVRNLLATVGPRQLVLVGGSVKAVSALSEDARDRHICSAVFTPRSG 706
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD) HSP 1 Score: 360 bits (925), Expect = 1.550e-109 Identity = 181/371 (48.79%), Postives = 257/371 (69.27%), Query Frame = 0 Query: 41 VVFTPLYGCDENISGVGPVCS-LLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTH-EGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409 + FTPLYG + P C+ LLE+ V I+LDCGW +DT LL+PL+ V+ R+DLVLISH DL H+GALPYA GKLG++A +Y TLP +MGQ+ +YDAY ++T +G+F F LDDVDA F FK LK+S+ LT + G G+ ITP+ AG +IG ++WR+ +T+D IIYA YNH+ E L+ + L TRP +LITD+ N + K K R++K+M I+ TVRGGGNVL+PTD++GRVLEL+ +LD+YW +++L + LLH+ ++ T + A++ LEW + I + FD+ R NPF+ ++H+IHSLEELD L P+VVL T +SL+ GF+K L +RWAS + N+I+ T +S A ++ Sbjct: 4 ITFTPLYG----VHSSDPCCAYLLEIDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRIEKETDD--IIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNIHSEQPKLKDRDSKIMVEILKTVRGGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNERIAKNFDVGRQNPFQFSHIHLIHSLEELDNL-PSPKVVLTTSSSLECGFAKDLFIRWASDQRNSIIFTCTSAPNSFATRVI 366
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO) HSP 1 Score: 359 bits (922), Expect = 3.230e-109 Identity = 178/374 (47.59%), Postives = 244/374 (65.24%), Query Frame = 0 Query: 43 FTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKKQME 416 F PL G + G P+C LLEV +LDCGWD + L+ L + V +VD VL+SH D +HLGALPYA GKLG+ VYATLP KMGQM +YD YLS+ E ++ F+L+DVD AF F ++++Q + +G+G G+TITP+ AG +G WR++ + ED I+YA YNH+ ERHL +AL RP VLITDA+N L + K R+ L++ +M T+R GGNVL+P DTA RVLELL++LD +W ++G Y LVLL+N A+N EFAKS LE+M++DI ++F+ R N F+ NVH+ HSLEEL+EL D P+VVLA+ SL+ G + LL+ WAS N IL R + ++ + + E Sbjct: 18 FVPLCG----VHGQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGTLSSFIQTYMDSDE 385
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC) HSP 1 Score: 358 bits (919), Expect = 5.730e-108 Identity = 182/370 (49.19%), Postives = 245/370 (66.22%), Query Frame = 0 Query: 41 VVFTPLYGCDENISGVG--PVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDL 408 + F+PLYG + G+G P C +L++ G I+LDCGW+ FD LLEPL V + VD VLISHPD EHLGALPYAFGKLGMR +VYATLP KMG M +YD +LSR +F F LDD+D AF+ F ++++Q G GAG+TITPYAAG M+G A+W+V +T+D ++YA +NH+ E+HL + L + RP VLITDA NA R + K RE L+ I+ TVR GNVL+P D AGRVLELL++L+E W + +L +Y+LVLL A+NT EFA+S LEWM +G+ FD +R N F ++ + HS++E L P+VVLA+ SLD G S+ + + WA N I+ T R S + ++ Sbjct: 8 IKFSPLYG----VQGIGEDPFCYVLDLDGFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKHLNGTVLESIKRPAVLITDASNARR-LPPSKTRENDLIEAILRTVRQDGNVLIPIDPAGRVLELLLVLEERWSQKQLAAYQLVLLTKVAYNTLEFARSHLEWMGEHVGQYFDRERHNAFNTRHLKLCHSIDEFRALPQGPKVVLASFGSLDAGASRHIFVEWAPDPRNLIVFTDRLQPGSLSREV 370
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA) HSP 1 Score: 356 bits (914), Expect = 7.520e-108 Identity = 184/373 (49.33%), Postives = 244/373 (65.42%), Query Frame = 0 Query: 41 VVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLLIHKK 413 + F+PL G P+C LLE+ I+LDCGW+ +D LL+PL+ VV +++ VLISHPDL HLGALPYA GKLG++A++ T+P +KMGQM +YDAY SR + F F+LDDVDAAF F LK+SQ T SG+G + ITPYAAG +IG +W++ +T++ IIYA YNHK ERHL P+ L LT+P +LITDA NAL R++ L+ I T+R GGNVLLP DTAGRVLELLV+LD++W H SY L+ L+N A+NT EFAKSQLEWMS I F R N F+ NV + H E++E P+VVLA+ +SL+ GF++ + + W S N I+ T + A L+ + K Sbjct: 5 IKFSPLCGAYNE----DPLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHW-SHFHYSYPLLFLNNVAYNTIEFAKSQLEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEF-PSPKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRLMENPK 369
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: M4C192_HYAAE (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C192_HYAAE) HSP 1 Score: 353 bits (905), Expect = 5.800e-107 Identity = 177/371 (47.71%), Postives = 253/371 (68.19%), Query Frame = 0 Query: 41 VVFTPLYGCDENISGVGPVCS-LLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRT-HEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409 + FTPLYG + P C+ LLEV V I+LDCGW +D +L+PL+ VV R+DLVL+SH DL H+GALPYA GKLG+ A +Y TLP +MGQ+ +YDA+ ++T HE +F F LDDVD F +F+ LK+S+ LT + G G+ ITP+ AG +IG A+WR+ +T+D IIYA YNH+ E L+ + L TRP +LITD+ N R+ K K R++K+M I+ TVR GGNVL+PTD++GRVLEL+ +LD+YW +++L + LLH+ ++ T + A++ LEW ++ I + FD+ R NPF+ ++H++H+LEELD L P+VVLAT +L+ GF+K + +RWA NTI+ T S A +L Sbjct: 4 ITFTPLYG----VHSSAPCCAYLLEVDDVCILLDCGWTDEYDVEILKPLQRVVDRIDLVLVSHLDLAHMGALPYAMGKLGLNAPIYGTLPVHRMGQIALYDAFQAKTKHESDFALFSLDDVDLVFEKFQQLKYSEKLTLTSSGEGIVITPHVAGHLIGGALWRIVKETDD--IIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNLHREQPKLKDRDSKIMMEILKTVRNGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNDRIAKNFDVGRQNPFQFSHIHLVHTLEELDAL-PSPKVVLATSPNLECGFAKDIFIRWAPDPRNTIIFTSTTPETSFAYRVL 366
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A2R6XNT6_MARPO (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XNT6_MARPO) HSP 1 Score: 353 bits (907), Expect = 6.990e-107 Identity = 180/372 (48.39%), Postives = 240/372 (64.52%), Query Frame = 0 Query: 37 GLRDVVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDL 408 G V TPL G P+C LLEV G +LDCGW FD A L+PL SV S +D VL+S+PD HLGALPYA G LG+ A VY TLP +MGQM +YD YLSR NFD F+LDDVD AF LK+SQH G+G G+TITPYAAGR++G VW+++ TED IIYA +NH+ ERHL + L RP VLITD++NAL + K R+ + + ++M +R GGNVLLP +TAGRVLEL++ LD+ W +L +Y + LL N +++T EFAKS LEWMS+ I ++F+ R N F L + + H+ ++LD+L P+VV A+ SL+ GF++ L + WA+ N +L T RG + + L Sbjct: 18 GSSSVQITPLSGAHSE----SPLCYLLEVDGFRFLLDCGWTDAFDVAQLQPLASVASTIDAVLLSYPDTMHLGALPYAVGNLGLTATVYCTLPVHRMGQMYMYDHYLSRRAVSNFDLFNLDDVDTAFGNSVQLKYSQHHLLQGKGEGITITPYAAGRLLGGTVWKITVDTED--IIYAVDFNHRKERHLNGTVLQSFVRPAVLITDSYNALNNQPLQKQRDAEFLDVVMKALRAGGNVLLPVETAGRVLELVLYLDKCWAGDKL-NYPMALLTNVSYSTLEFAKSLLEWMSDAIAKSFEHTRDNSFVLKYLKLCHTRKDLDDLPAGPKVVFASMASLEAGFARELFVEWATDPNNLVLFTERGQVGTLSRKL 382
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: UPI00155AE16F (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 n=1 Tax=Drosophila subobscura TaxID=7241 RepID=UPI00155AE16F) HSP 1 Score: 342 bits (877), Expect = 2.650e-106 Identity = 165/354 (46.61%), Postives = 239/354 (67.51%), Query Frame = 0 Query: 58 PVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNFDAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLG--SYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409 P C +L++ V I+LDCGWD FD ++ L+ V +D VL+SHPD HLGALPY GKLG+ +YAT+P +KMGQM +YD Y+S + G+FD F LDDVD AF + LK++Q ++ G+G G++ITP AG MIG +W++ + + DI+YAT +NHK ERHL L +L RP++LITDA+NA + +AR+ KLM+ I+ TVR GNVL+ DTAGR+LEL +LD+ W G +Y L LL+N ++N EFAKSQ+EWMS+ + +AF+ R+NPF+ ++ + H+L ++ +L P+VVLA+ L+ GF++ L ++WAS N+I+LT R + A DL+ Sbjct: 18 PPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAADTAGRMLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVVEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHTLADVYKLPAGPKVVLASTPDLESGFTRDLFIQWASNANNSIILTTRTSPGTLAMDLV 370
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Match: A0A7S0WC87_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WC87_9CHLO) HSP 1 Score: 350 bits (897), Expect = 6.260e-105 Identity = 184/394 (46.70%), Postives = 253/394 (64.21%), Query Frame = 0 Query: 19 ATSAQAVAKNGSSGVK--QKGLRDVVFTPLYGCDENISGVGPVCSLLEVGGVTIMLDCGWDIHFDTALLEPLRSVVSRVDLVLISHPDLEHLGALPYAFGKLGMRARVYATLPAWKMGQMTVYDAYLSRTHEGNF-DAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIIYATAYNHKPERHLRPSALSQLTRPNVLITDAHNALRDVQKPKARETKLMSIIMDTVRGGGNVLLPTDTAGRVLELLVLLDEYWHKHRLGSYKLVLLHNTAFNTAEFAKSQLEWMSNDIGRAFDLQRSNPFELPNVHIIHSLEELDELGDDPRVVLATDTSLDFGFSKALLLRWASGKANTILLTGRGHGDSTANDLL 409 AT+ AVA+ S K ++G + V+ TPLYG + G P+C + + G I+LDCGW+ FD LL PL ++ +D VLISHPD HLGALPYAFGKLGM +VYATLP KMGQM +YD +L+R + +F + F LDDVD AFA F +KF Q G+G G+T+T YAAG +G AVW++ ED ++YA YN + ERHL +A + RP +LITDA N R V R+ +L I+ +VR GNVL+P D AGRVLEL++LL+E W + +LGSY+++LL N A+NT +FAKS LEWM + AF+ +R NPF+ + + HS+EEL L P+VVLA+ SL+ G ++ L WA +N ++LTG+ S + ++L Sbjct: 6 ATALDAVAEGESVKAKTVERGNK-VLVTPLYG----VKGEQPMCYHVSIDGCNILLDCGWNDQFDVDLLAPLAAIAPTIDAVLISHPDTAHLGALPYAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTRQDQCDFQETFSLDDVDTAFAAFVPVKFMQLSMLRGKGEGITVTAYAAGHTLGGAVWKIGKDAED--VVYAVDYNVRKERHLNGTAFDAIHRPALLITDACNVGRAVPNKATRDAQLTEAILSSVRKNGNVLIPIDPAGRVLELILLLEEKWAQRQLGSYQIILLTNVAYNTIDFAKSHLEWMGEGVTTAFERKRENPFDTKFLTLCHSMEELKALPAGPKVVLASFGSLEAGPARHLFAEWADNASNLVILTGQPEPGSLSEEVL 392 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1117.749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1117.749.1 ID=prot_H-paniculata_contig1117.749.1|Name=mRNA_H-paniculata_contig1117.749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=799bpback to top |