prot_H-paniculata_contig11162.744.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11162.744.1
Unique Nameprot_H-paniculata_contig11162.744.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length351
Homology
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BLAST of mRNA_H-paniculata_contig11162.744.1 vs. uniprot
Match: A0A6H5JP20_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP20_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.800e-43
Identity = 131/384 (34.11%), Postives = 180/384 (46.88%), Query Frame = 0 
Query:    8 ASYSIPPLAKDLLLKMLHRDPDQRLTAQQVLHHPWFRTATIIG-QLDLATADDPLPSAAAAT---PAAASPAPVASDALQVFWSGRRRLKGCLLAVMTGLVD----GISE-----EMPAAKSKADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIN----RKSEGK---------------------------NLNAKAVHAYYSPPSRPPLLVGGDEDLXXXXXXXXXXXXXXXXXGRVTSASALALGAHASEAFIGSRTVACRMIDRGGKGYITADDLVHVLRLMGEDADASEEMVMEMMQAVDGDPSTETRRVTYEQMARLVPPLCPARKFRAGEELYKEGDLDPTFYLLRKGVVEFSVSTPVGKVPLQTQGPG 347
            A   + PLA+DL+LKML  DP+ R T Q+VL HPW   A++ G    L T +         T   P    P P  ++ALQ FWS RRRLK C+LA+M GLV+    G +E      M     K D                                     N     + E K                           ++ A A++A Y        ++  ++DL                   + + +++ +  +A    IGSR  AC +IDRG KGYIT  DL H++  MGE    +E  + +MM+A+DG+P+TE+RR+TYE+M + VPPLCP +K +AG+ LYKEG LDPTFYLL KG VEFSV +  G+  LQ Q  G
Sbjct:  417 ARSRVSPLARDLILKMLTPDPELRATPQEVLQHPWLELASLRGGDRTLRTMNPRCHMHRHRTERHPRYGEPTPTNAEALQNFWSARRRLKACMLALMCGLVETEVEGYNEGEGLRTMMETNLKMDERGIKWGAPPPPPAGLAGAGIPAVLLPNSLFQSTPTRNPPFSAEMEAKEKAXXXXXXXXXXXXXXXXXXXXXXXXSVKAAAMYADYLEK-----ILQEEDDLSEDRF--------------IATLTSVGIQPYA----IGSREAACGIIDRGRKGYITRGDLEHIMLAMGEHLTRAE--ITDMMRAIDGNPATESRRITYEEMVQTVPPLCPPKKIKAGQTLYKEGQLDPTFYLLMKGTVEFSVRSLQGQAGLQRQSSG 775
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BLAST of mRNA_H-paniculata_contig11162.744.1 vs. uniprot
Match: D7G274_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G274_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.910e-42
Identity = 163/363 (44.90%), Postives = 203/363 (55.92%), Query Frame = 0 
Query:    8 ASYSIPPLAKDLLLKMLHRDPDQRLTAQQVLHHPWFRTATIIGQLDLATADDPLPSA----AAATPAAASPAPVASDALQVFWSGRRRLKGCLLAVMTGLVDGISEEMPAAKS-------------------KADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINRKSEGKNLNAKAVHAYYSPPSRPPLLVGGDEDLXXXXXXXXXXXXXXXXXGRVTSASALALGAHASEAFIGSRTVACRMIDRGGKGYITADDLVHVLRLMGEDADASEEMVMEMMQAVDGDPSTETRRVTYEQMARLVPPLCPARKFRAGEELYKEGDLDPTFYLLRKGVVEFSVSTPVGKVPLQTQGPG 347
            A  S+ PLA+DL+LKML  DP+ R T Q+VL HPW   A++ G        +P        A   P    PAP   +ALQ FWS RRRLK C+L++M GLV+  +EE    +S                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             A++A Y   S+     G  ED                    + +  ++ +  +A    IGSR  AC +IDRG KGYIT  DL  +   MGE    +E  + +MM+A+DGDP+TE+RR+TY +M   VPPLCP +K +AG+ LYKEG LDPTFYLL KGVVEFSV +   +  LQ Q PG
Sbjct:  254 ARSSVSPLARDLILKMLTPDPELRATPQEVLQHPWLELASLGGGDRTLRTMNPRGHMHRHRAERHPRHGEPAPTNPEALQKFWSARRRLKTCMLSLMCGLVEIEAEEYNEEESLRALMELRLEMDERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMYADYMEKSQQEA-DGASEDRFIA----------------MLTIPSVGIRPYA----IGSREAACGIIDRGRKGYITRGDLERITLAMGERFTRAE--ITDMMRAIDGDPATESRRITYGEMVETVPPLCPPKKIKAGQTLYKEGQLDPTFYLLMKGVVEFSVCSLQEQAGLQRQLPG 593
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BLAST of mRNA_H-paniculata_contig11162.744.1 vs. uniprot
Match: A0A836CA94_9STRA (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA94_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.280e-9
Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:  293 RLVPPLCPARKFRAGEELYKEGDLDPTFYLLRKGVVEFSVSTPVGKVPLQTQGPGD 348
            RLVPPLCPARK++ GE +Y+EG+ D +F+L+++G +EF + +P G+  LQ    GD
Sbjct:    1 RLVPPLCPARKYQPGEVVYREGERDDSFFLVKRGNIEFGIGSPAGEQVLQGLSAGD 56
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BLAST of mRNA_H-paniculata_contig11162.744.1 vs. uniprot
Match: H3GS53_PHYRM (cGMP-dependent protein kinase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS53_PHYRM)

HSP 1 Score: 60.1 bits (144), Expect = 3.430e-6
Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = 0 
Query:    8 ASYSIPPLAKDLLLKMLHRDPDQRLTAQQVLHHPWFRTATIIGQLDLATADDPLPSAAAATPAAASPAPVASDALQVFWSGRRRLKGCLLAVMT------GLVDGISEEMPAAK 115
            A  SI P A+DL+LK+L  DP+QRL+A+Q L HPW R  + +                        P   + + L+ F  GRRRL+  +LAV+        + DG +EE+ + K
Sbjct:  376 AWQSISPSARDLILKLLETDPNQRLSAEQALQHPWLRNQSQLSH---------------------EPMKNSVELLEKFQRGRRRLRASILAVLLLDAMDDNIDDGDNEELESVK 468
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11162.744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JP20_9PHAE1.800e-4334.11cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
D7G274_ECTSI1.910e-4244.90cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
A0A836CA94_9STRA2.280e-950.00Cyclic nucleotide-binding domain-containing protei... [more]
H3GS53_PHYRM3.430e-633.33cGMP-dependent protein kinase n=1 Tax=Phytophthora... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 286..348
e-value: 7.2E-6
score: 27.7
NoneNo IPR availableGENE3D1.10.510.10coord: 5..51
e-value: 2.3E-9
score: 39.2
NoneNo IPR availableGENE3D1.10.238.10coord: 220..285
e-value: 1.7E-6
score: 29.9
NoneNo IPR availablePANTHERPTHR24349SERINE/THREONINE-PROTEIN KINASEcoord: 11..255
NoneNo IPR availablePANTHERPTHR24349:SF95CALCIUM-DEPENDENT PROTEIN KINASE 3coord: 11..255
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 282..350
score: 8.76
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 235..260
score: 9.102
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 10..70
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 294..348
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 233..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11162contigH-paniculata_contig11162:1633..4744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11162.744.1mRNA_H-paniculata_contig11162.744.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11162 1633..8164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11162.744.1 ID=prot_H-paniculata_contig11162.744.1|Name=mRNA_H-paniculata_contig11162.744.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp
MTAAVAVASYSIPPLAKDLLLKMLHRDPDQRLTAQQVLHHPWFRTATIIG
QLDLATADDPLPSAAAATPAAASPAPVASDALQVFWSGRRRLKGCLLAVM
TGLVDGISEEMPAAKSKADDSSSSSRDGEERQRQEKQQRRRRRRRSSSSG
SSSSSINRKSEGKNLNAKAVHAYYSPPSRPPLLVGGDEDLLGGDVSASSS
GSSSSSSGRVTSASALALGAHASEAFIGSRTVACRMIDRGGKGYITADDL
VHVLRLMGEDADASEEMVMEMMQAVDGDPSTETRRVTYEQMARLVPPLCP
ARKFRAGEELYKEGDLDPTFYLLRKGVVEFSVSTPVGKVPLQTQGPGDDG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR002048EF_hand_dom
IPR011009Kinase-like_dom_sf
IPR018490cNMP-bd-like
IPR011992EF-hand-dom_pair