prot_H-paniculata_contig111.714.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig111.714.1
Unique Nameprot_H-paniculata_contig111.714.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length543
Homology
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: D8LU32_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU32_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 7.410e-43
Identity = 97/168 (57.74%), Postives = 116/168 (69.05%), Query Frame = 0
Query:    2 VASLLQHHKGTCDRTKTSFSALVFVSTRMLASTTPNLLKNYMQRAMPELSRFVNARCIMGLSDMTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNN-CRFLGLSRTCGRIDQEHVRTICKRESNMLEAIEKLSTSGSS 168
            +A LL+ HK  CD +   FSALVFVS R LA  TP +L+        E   FV A+ I+GLS+MT  +Q   L  F+NG  NVLVST+VC EGID+PAC+LVVC SLP+SGT LVQLRGRIR   N CRF+GL+RT G  D+ HV++IC RE NMLEAI  LS  GSS
Sbjct:  675 IAWLLEEHKRACDASGKRFSALVFVSRRELALATPAMLE--------EAKPFVKAQSIVGLSEMTLNQQRRALASFQNGLKNVLVSTSVCGEGIDVPACALVVCASLPSSGTELVQLRGRIRSKENECRFVGLTRTAGAADKAHVKSICLREQNMLEAIRSLSGGGSS 834          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: A0A0H5R4I3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4I3_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 8.910e-24
Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = 0
Query:   14 DRTKTSFSALVFVSTRMLASTTPNLLKNYMQRAMPELSR--FVNARCIMGLSDMTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFLGLSRTCGRIDQEHVRTICKRESNMLEAIEKL 162
            D     FSAL+FVSTR LA     L+K+        +SR  F+ A  ++G+S+MT A+Q T L  FR+   NV+VST+VC EG+DIPAC LV+CT LPNS  + VQ+RGRIR   + R+L + R   R D  HV  +  RE NM EAI+++
Sbjct:  492 DADPKGFSALIFVSTRGLAI---ELVKH--------ISRIPFIKAEAMVGISEMTLAQQKTVLSKFRDQVINVVVSTSVCGEGVDIPACCLVICTCLPNSMISFVQIRGRIRSNESARYLSMVRE--RRDM-HVEGLVLREDNMNEAIQQI 628          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: A0A6A5BL25_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BL25_NAEFO)

HSP 1 Score: 82.4 bits (202), Expect = 1.010e-12
Identity = 59/167 (35.33%), Postives = 81/167 (48.50%), Query Frame = 0
Query:    2 VASLLQHHKGTCDRTKTSFSALVFVSTRMLASTTPNLLKNYMQRAMPELSRFVNARCIMG------LSDMTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFLGLSRTCGRIDQEHVRTICKRESNMLEAIEKL 162
            +A LL  +K           AL+FV TR+    T   L++      PEL  F+    ++G         MT ++Q T L  FRNG  N L+ST+V  EGIDIPACSLVV     +S   L+Q RGR R  N+  +  L    G   Q+ V     +E  M+ A++ L
Sbjct:  538 LARLLSEYKSKAQ----DMRALIFVKTRLSCKETKEFLES-----RPELRDFLKLDILLGHGKGASTGGMTSSQQQTVLTNFRNGVINTLISTSVAEEGIDIPACSLVVRLDGVDSALNLIQSRGRARSRNSEFYCILHTNSG---QKSVERYQMQERKMIAAVDLL 692          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: F4QCG4_CAVFA (Putative RNA helicase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QCG4_CAVFA)

HSP 1 Score: 78.6 bits (192), Expect = 1.420e-11
Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = 0
Query:    5 LLQHHKGT--CDRTKTSFSALVFVSTRMLASTTPNLLKNYMQRAMPELSRFVNARCIMGLSD-------MTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFLGLSRTCGRIDQEHVRTICKRESNMLEAIEKLST 164
            +L+ H      D +K  F A++FV TR  A     +L N   ++    +R+   +C+  +         M+ ++Q   +E FR G  NV+V+TNV  EG+D+P C+LV+    P++ TAL+Q RGR R   N  F+ + +T   I+    R     E  + E IE L T
Sbjct:  503 ILEEHNALHQADPSKDQFRAILFVKTRDSAHQLGEILNNISNKS----TRYSFTKCVTVVGHGSNTDGGMSTSKQKEVVEAFRTGKANVVVTTNVLEEGLDVPECNLVIRIDAPSTVTALIQSRGRAR-HRNSEFVAIIKT---IEGHSYRRFLMHEQLLQETIEFLRT 663          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: D2V9B4_NAEGR (Dicer helicase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V9B4_NAEGR)

HSP 1 Score: 77.4 bits (189), Expect = 3.510e-11
Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = 0
Query:    2 VASLLQHHKGTCDRTKTSFSALVFVSTRMLASTTPNLLKNYMQRAMPELSRFVNARCIMGLSDMTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNN 127
            +A LL+ +K T    +    AL+FV TR+    T   L++      P+L  ++    ++G S MT  +Q+T L+ FR G  N L+ST+V  EG+D+PACSLV+      +   ++Q RGR R  N+
Sbjct:  416 LAKLLKQYKETGKELR----ALIFVKTRIGCKETLEFLQSE-----PDLKDYLKVDILLGKSGMTSNQQNTILDNFRQGIVNTLISTSVAEEGLDVPACSLVIRLDGIETTKTMIQSRGRARSANS 532          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: F7VPX7_SORMK (WGS project CABT00000000 data, contig 2.3 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) TaxID=771870 RepID=F7VPX7_SORMK)

HSP 1 Score: 76.3 bits (186), Expect = 9.660e-11
Identity = 40/114 (35.09%), Postives = 66/114 (57.89%), Query Frame = 0
Query:   23 LVFVSTRMLASTTPNLLKNY-MQRAMPELSRFVNARCIMG----LSDMTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFL 131
            +VFV  R++ S   +++  + + +     +  +    + G      DMT A  + +LEGFR G FN+LV+TNV  EGID+P C+LV+C   P++  + +Q RGR R G++  +L
Sbjct:  424 IVFVQERVMVSIVTHIISTHPLTKDRYRTAAMIGTANVPGRKQHFKDMTNAGDNKSLEGFREGRFNLLVATNVLEEGIDVPICNLVICFDKPSNIKSFIQRRGRARKGSSTLYL 537          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: V4BFR5_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BFR5_LOTGI)

HSP 1 Score: 75.5 bits (184), Expect = 1.740e-10
Identity = 54/158 (34.18%), Postives = 87/158 (55.06%), Query Frame = 0
Query:    8 HHKGTCDRTKTSFSALVFVSTRMLASTTPNLLKNYMQRAMPELSRFVNARCIMGLSDMTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFLGLSRTCGRIDQEHVRTICKRESNMLEAIEKLSTS 165
            ++ G  + T+ S  ALV V  R  A     LL+N +     +++  V        S M   +Q  TLEG ++  FN++V+T+V  EG+DIPAC LVV  + P++ TALVQ+RGR R  +   F+ +  T  +  +E + ++  +E NM++A   +S S
Sbjct: 1419 NNPGYINFTEESAMALVLVQMRSSAKKLSKLLQNTLTHL--KVTHLVG-HGKGSESGMRVQKQKRTLEGIKSNKFNIVVATSVAEEGVDIPACQLVVSLNPPSNVTALVQIRGRAR-KHGSNFVIICNTEEK--KEKINSLITKEQNMIKAARTISQS 1570          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: A0A3N4KTJ5_9PEZI (Uncharacterized protein n=1 Tax=Morchella conica CCBAS932 TaxID=1392247 RepID=A0A3N4KTJ5_9PEZI)

HSP 1 Score: 74.3 bits (181), Expect = 3.720e-10
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 0
Query:   20 FSALVFVSTRMLASTTPNLLKNYMQRAMPELSRFVNARCIMGLSD------------MTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFL 131
            FS LVFV  R+  S    +L+ +     P+     +   ++G SD             T  EQ  T+EGFR    N+++ST+V  EG+DIPAC LVVC SLP +  + +Q RGR R   +  +L
Sbjct:  136 FSGLVFVEQRVGVSVLAEILREH-----PDTREIFDVGTLVGTSDNSAKTGRLVYEPTTLQEQKGTIEGFRRKTKNIVISTSVVEEGLDIPACHLVVCFSLPKNVKSFIQRRGRARQEKSTYYL 254          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: A0A6P8I5K1_ACTTE (uncharacterized protein LOC116298393 isoform X1 n=3 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I5K1_ACTTE)

HSP 1 Score: 73.6 bits (179), Expect = 6.350e-10
Identity = 57/147 (38.78%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   22 ALVFVSTRMLASTTPNLLKNYMQRAMPELSR-FVNARCIMGLSD------MTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFLGLSRTCGRIDQEH-VRTICKRESNMLEAIE 160
            ALV V  R  A      L ++     PEL R  V    I+G  +      MT A+Q  TL+  R G + V+V+T+V  EG+D+PAC LVV    PNS TALVQ+RGR R     +F  +   C   DQ   ++ +  RE NM +A E
Sbjct:  988 ALVLVKRRCTAVCLAEYLNSF-----PELQRKLVRTTYIVGHGNGGTDRGMTVAQQIDTLKLIRQGVYQVVVATSVAEEGLDLPACDLVVQMDPPNSVTALVQIRGRAR-QKRAQFAAI---CRDKDQARKIKDLLAREENMRQAAE 1125          
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Match: A0A545W8I7_9HYPO (RNA helicase/RNAse III n=1 Tax=Cordyceps javanica TaxID=43265 RepID=A0A545W8I7_9HYPO)

HSP 1 Score: 73.6 bits (179), Expect = 6.760e-10
Identity = 49/160 (30.63%), Postives = 80/160 (50.00%), Query Frame = 0
Query:   21 SALVFVSTRMLASTTPNLLKNYMQRAMPELSRFVNARCIMGLSDMTRAEQST----------TLEGFRNGAFNVLVSTNVCSEGIDIPACSLVVCTSLPNSGTALVQLRGRIRCGNNCRFLGLSRTCGRIDQ-----EHVRTICK---RESNMLEAIEKL 162
            + ++FV  R+ A+    LL +     +P +       C++G S     ++S           TL  FR G  N+LV+T+V  EGID+PAC+LV+C   P +  + +Q RGR R  ++   L   +    IDQ     E ++ +C+   RE   +EA+E+L
Sbjct:  403 TGIIFVKERVTAAVLSALLAS-----IPNIRSRYQIGCMVGTSHNQLRKRSLYEYFDSKDLKTLHEFREGKINLLVATSVLEEGIDVPACNLVICFDSPQTPKSFIQRRGRARMQDSTLLLFAQKQSSIIDQWAAFEEEIQKLCRNSERERQQVEALERL 557          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig111.714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU32_ECTSI7.410e-4357.74DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A0H5R4I3_9EUKA8.910e-2447.02Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A6A5BL25_NAEFO1.010e-1235.33Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
F4QCG4_CAVFA1.420e-1131.95Putative RNA helicase n=1 Tax=Cavenderia fascicula... [more]
D2V9B4_NAEGR3.510e-1135.71Dicer helicase n=1 Tax=Naegleria gruberi TaxID=576... [more]
F7VPX7_SORMK9.660e-1135.09WGS project CABT00000000 data, contig 2.3 n=1 Tax=... [more]
V4BFR5_LOTGI1.740e-1034.18Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A3N4KTJ5_9PEZI3.720e-1036.29Uncharacterized protein n=1 Tax=Morchella conica C... [more]
A0A6P8I5K1_ACTTE6.350e-1038.78uncharacterized protein LOC116298393 isoform X1 n=... [more]
A0A545W8I7_9HYPO6.760e-1030.63RNA helicase/RNAse III n=1 Tax=Cordyceps javanica ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 44..125
e-value: 9.0E-14
score: 61.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 18..123
e-value: 5.8E-16
score: 58.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 4..167
score: 13.721
NoneNo IPR availableGENE3D3.40.50.300coord: 1..163
e-value: 3.3E-25
score: 90.4
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 17..131
NoneNo IPR availablePANTHERPTHR14950:SF45coord: 17..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 294..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 317..542
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig111contigH-paniculata_contig111:47365..50011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig111.714.1mRNA_H-paniculata_contig111.714.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig111 47158..51008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig111.714.1 ID=prot_H-paniculata_contig111.714.1|Name=mRNA_H-paniculata_contig111.714.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=543bp
MVASLLQHHKGTCDRTKTSFSALVFVSTRMLASTTPNLLKNYMQRAMPEL
SRFVNARCIMGLSDMTRAEQSTTLEGFRNGAFNVLVSTNVCSEGIDIPAC
SLVVCTSLPNSGTALVQLRGRIRCGNNCRFLGLSRTCGRIDQEHVRTICK
RESNMLEAIEKLSTSGSSALSSCGSTSELPSSLGGASASASASAAAVTTT
ATAGSGSGSTSELPSYVGGASASASPAANGSRRINSCGSTSESPYVGEVA
SVAAAPAAPLSSLPTTDKGVGSTHSSCGSTSEPLARPRREETPFAAAAAA
AAATATATAVAMAAVWKPKVGKEIDVDPTPNGITTTTGNSSDGDVTEMNR
LHVAIMRATLGKRRSPSVAGSVAGSVAGSVAGSMVESVAGSVVGSVSGSE
MEGIDDGMGWSKPTGPLLNPRLVLYALRFLASTTRQTIFKHGPEQNARAC
LNCSLQLAHLLKPTLSYDERKKGTGGKAVFHARCFITCDIAAADVKGLVL
VTQATGNGVKPAREAAAGKAVQKLLSQPSGIIEHGASSPPSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase