prot_H-paniculata_contig11023.668.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11023.668.1
Unique Nameprot_H-paniculata_contig11023.668.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length331
Homology
[Close]
BLAST of mRNA_H-paniculata_contig11023.668.1 vs. uniprot
Match: A0A6H5K1B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B4_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 4.430e-18
Identity = 58/109 (53.21%), Postives = 66/109 (60.55%), Query Frame = 0 
Query:  190 GGAGQRAKEPQREKRTGSGVLPDGTFFVEM-----------------GKAFFTPREKDGRLPMEDLIAATQACLQALTDDVVVVNHGGDTEPSRYRALVRPFSVRLVPG 281
            GGAG      +R  R G  V+  G FF+E+                 GKA  TP  +DGRLPME LIA TQ CLQALTDDV VVNHGG +E  +YRALVRPF+VRL PG
Sbjct:  505 GGAGPEHSG-RRGLRRGRSVVTGGRFFLEVRLAVFAESGAMVIGGWVGKALLTPG-RDGRLPMETLIATTQGCLQALTDDVSVVNHGGTSEAGQYRALVRPFTVRLSPG 611
[Close]
BLAST of mRNA_H-paniculata_contig11023.668.1 vs. uniprot
Match: D7FHF4_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.140e-13
Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:  229 KDGRLPMEDLIAATQACLQALTDDVVVVNHGGDTEPSRYRALVRPFSVRLVPG 281
            +DGRL ME LIA TQ CLQALTDDV VVNHGG +E  +YRALVRPF+VRL PG
Sbjct:  858 RDGRLRMETLIATTQGCLQALTDDVSVVNHGGSSEAGQYRALVRPFTVRLSPG 910
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11023.668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1B4_9PHAE4.430e-1853.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHF4_ECTSI1.140e-1375.47Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11023contigH-paniculata_contig11023:1750..3555 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11023.668.1mRNA_H-paniculata_contig11023.668.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11023 1750..3555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11023.668.1 ID=prot_H-paniculata_contig11023.668.1|Name=mRNA_H-paniculata_contig11023.668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp
GQGITTFEAEESGVLRALLRALFSGRHRGGLEEHYCQNGGGGGSGGSSAD
QRNVGADERNTSGCYKKGETPAATVRTELMVQSEQAAGSTRVVVASGTEE
SEGTQVEGVEQARPANAGQSDPKARKSNTESISHVPFASEIHAAAEATNS
CATSSGSSSSNEKQVSRATTKITSTMSSGPQAVPMAENPGGAGQRAKEPQ
REKRTGSGVLPDGTFFVEMGKAFFTPREKDGRLPMEDLIAATQACLQALT
DDVVVVNHGGDTEPSRYRALVRPFSVRLVPGSAAAKKPSRSSSSSSKRRK
QSCAAAALGNEAMAAAESKEWSGVNRAANGG
back to top