prot_H-paniculata_contig11015.665.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11015.665.1
Unique Nameprot_H-paniculata_contig11015.665.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 1.340e-71
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            MSGKGKGGRG  KKS TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 4.580e-70
Identity = 116/123 (94.31%), Postives = 119/123 (96.75%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            MSGKGKGGRG  KKS TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 3.120e-66
Identity = 109/120 (90.83%), Postives = 116/120 (96.67%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 7.560e-66
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KK  +RSAKAGLQFPVGRIGRF+KQGKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.600e-65
Identity = 109/120 (90.83%), Postives = 116/120 (96.67%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 201 bits (512), Expect = 6.840e-65
Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            MSGKGKGGRG GKKS T SAKAGLQFPVGRIGR+L+QGKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRG-GKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.710e-64
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0 
Query:    1 MSGKGKGGRG-DGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 125
            M+GKGKGGRG +GKK  ++SAKAGLQFPV R+GR+LKQG+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELN+LLG VTIASGGVLPNIHAVLLPKK   KA
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKA 126
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.520e-64
Identity = 103/123 (83.74%), Postives = 117/123 (95.12%), Query Frame = 0 
Query:    3 GKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 125
            GKGKGGRGD KK++++SAKAGLQFPVGR+GRFLKQG+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K+
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKS 126
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.960e-64
Identity = 105/120 (87.50%), Postives = 114/120 (95.00%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG+ KKS T SAKAGLQFPVGRIGR+L+QGKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
[Close]
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 199 bits (507), Expect = 5.840e-64
Identity = 104/124 (83.87%), Postives = 116/124 (93.55%), Query Frame = 0 
Query:    1 MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            MSG+GKG    GKK+++RSAKAGLQFPVGR+ R+LK+GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK  KK
Sbjct:    1 MSGRGKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11015.665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.340e-7194.35Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI4.580e-7094.31Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE3.120e-6690.83Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LLP0_ECTSI7.560e-6690.00Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
D7FVQ5_ECTSI1.600e-6590.83Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6U2JFS4_9STRA6.840e-6587.80Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A835ZBB6_9STRA2.710e-6484.13Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZLE9_9STRA3.520e-6483.74Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA3.960e-6487.50Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A061QUG5_9CHLO5.840e-6483.87Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 100..118
score: 76.04
coord: 43..58
score: 90.36
coord: 58..71
score: 90.54
coord: 72..86
score: 74.98
coord: 14..36
score: 68.53
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 3.5E-79
score: 279.1
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 12..89
e-value: 1.1E-15
score: 58.2
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..125
e-value: 6.9E-19
score: 67.3
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..125
e-value: 3.6E-62
score: 210.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 5..124
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 8..125
NoneNo IPR availablePANTHERPTHR23430:SF251coord: 8..125
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11015contigH-paniculata_contig11015:6749..7126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11015.665.1mRNA_H-paniculata_contig11015.665.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11015 6749..7126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11015.665.1 ID=prot_H-paniculata_contig11015.665.1|Name=mRNA_H-paniculata_contig11015.665.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MSGKGKGGRGDGKKSMTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKVVKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS