prot_H-paniculata_contig10993.643.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10993.643.1
Unique Nameprot_H-paniculata_contig10993.643.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length120
Homology
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BLAST of mRNA_H-paniculata_contig10993.643.1 vs. uniprot
Match: D8LCH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 5.350e-30
Identity = 68/119 (57.14%), Postives = 88/119 (73.95%), Query Frame = 0 
Query:    1 FIKTQVEEGRERWQARLDSLREECSTERATTRDKVARLAAKSEQAEXXXXXXXXXXGDRKAALRAALEAELFQVEAKVAAVLEQKSGQAEALRERLATLRKATKAREEELSDYRRRTFS 119
            F  T++EEGRERW++RL+ L+EECS ER   R++V+RL  ++E AE           D+ A LRA+L AE  QVEAKVAAVL +K+ QA+AL+ERL +L+  TKAREEELSD+RRRTFS
Sbjct:    3 FYYTKLEEGRERWRSRLERLQEECSEERKAVREQVSRLTERAEGAEAAARRAAGVREDKSAGLRASLSAEFAQVEAKVAAVLGRKTEQADALKERLTSLQGQTKAREEELSDHRRRTFS 121
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BLAST of mRNA_H-paniculata_contig10993.643.1 vs. uniprot
Match: A0A6H5JCC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCC7_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.460e-27
Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 0 
Query:    5 QVEEGRERWQARLDSLREECSTERATTRDKVARLAAKSEQAEXXXXXXXXXXGDRKAALRAALEAELFQVEAKVAAVLEQKSGQAEALRERLATLRKATKAREEELSDYRRRTFS 119
            Q+EEGRERW++RL  L+EECS ER   +++V+RL+ ++E AE           D  A LRA+L AE  QVE KVAAVL +K+ QA AL+ERL++L+  TKAREEELSD+RRRTFS
Sbjct:   20 QLEEGRERWRSRLKRLQEECSEERKAAKEEVSRLSERAEGAEAAARRAAGFREDESAGLRASLSAEFAQVEGKVAAVLSRKTEQANALKERLSSLQGQTKAREEELSDHRRRTFS 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10993.643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCH6_ECTSI5.350e-3057.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCC7_9PHAE1.460e-2756.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..48
NoneNo IPR availableCOILSCoilCoilcoord: 64..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10993contigH-paniculata_contig10993:2010..5850 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10993.643.1mRNA_H-paniculata_contig10993.643.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10993 2010..5850 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10993.643.1 ID=prot_H-paniculata_contig10993.643.1|Name=mRNA_H-paniculata_contig10993.643.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
FIKTQVEEGRERWQARLDSLREECSTERATTRDKVARLAAKSEQAEEAAR
AAAGTAGDRKAALRAALEAELFQVEAKVAAVLEQKSGQAEALRERLATLR
KATKAREEELSDYRRRTFS*
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