prot_H-paniculata_contig10923.601.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10923.601.1
Unique Nameprot_H-paniculata_contig10923.601.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length713
Homology
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BLAST of mRNA_H-paniculata_contig10923.601.1 vs. uniprot
Match: A0A6H5KVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG9_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 7.840e-41
Identity = 87/163 (53.37%), Postives = 110/163 (67.48%), Query Frame = 0 
Query:  550 ADAPRPASSVEEYLANTQRGMEAVASIKSGTVFWIKFSDTKEAWLECGIVVKVHHKSAKPYEVEWRPYDSSGVELADDPQHRISLLPRLHVSWPSVPSVSPSPTRRTEQQQSAGSMPKAGTVPKTSSLFIITSKKIKLNVPPIGSWTIVESSRPWGDLGPFAF 712
            +++P PA SVEEYLANT++G EAVASIK GTVFWIKFSDT+EAW+EC +V KVH +SA PYEV WRP+DS G +LA + + RI+L PRL +S P+ P ++       E    AG+  + G  P          KK KL VPPIGSW IV+  +PWG L PF +
Sbjct: 1592 SESPGPAHSVEEYLANTKKGTEAVASIKEGTVFWIKFSDTREAWVECAVVTKVHPRSAVPYEVTWRPFDSGGCDLALNAKKRIALTPRLFMSSPANPELAG------ENDPPAGTARRGGFQP--------ARKKFKLTVPPIGSWCIVKPDQPWGQLDPFTY 1740
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BLAST of mRNA_H-paniculata_contig10923.601.1 vs. uniprot
Match: D7G2E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E8_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 4.060e-40
Identity = 88/163 (53.99%), Postives = 109/163 (66.87%), Query Frame = 0 
Query:  550 ADAPRPASSVEEYLANTQRGMEAVASIKSGTVFWIKFSDTKEAWLECGIVVKVHHKSAKPYEVEWRPYDSSGVELADDPQHRISLLPRLHVSWPSVPSVSPSPTRRTEQQQSAGSMPKAGTVPKTSSLFIITSKKIKLNVPPIGSWTIVESSRPWGDLGPFAF 712
            +++P PA SVEEYLANT++G EAVASIK GTVFWIKFSDT+EAW+EC +V KV+ +SA PYEV WRP+DS G +LA + + RI+L PRL VS P+ P  +       E    AG+  + G  P          KK KL VPPIGSW IV+  RPWG L PF +
Sbjct: 1339 SESPGPAHSVEEYLANTKKGTEAVASIKEGTVFWIKFSDTREAWVECAVVSKVYPRSAVPYEVTWRPFDSGGCDLALNAKKRIALTPRLFVSSPANPEPAG------ENDPPAGTARQGGFQP--------ARKKFKLTVPPIGSWCIVKPDRPWGQLEPFTY 1487
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10923.601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVG9_9PHAE7.840e-4153.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2E8_ECTSI4.060e-4053.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10923contigH-paniculata_contig10923:1186..5059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10923.601.1mRNA_H-paniculata_contig10923.601.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10923 520..6519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10923.601.1 ID=prot_H-paniculata_contig10923.601.1|Name=mRNA_H-paniculata_contig10923.601.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=713bp
MASANSSIEGAAASFTTPKTPSASAQPIVIGKSSSKPEMSSKHLDSANLE
PPTAVTSTSAGAATPIATPGGASGDSAQPTATGKSSMKANMSRKQPDSTN
PVPQAPVMGSKESAATSVTTPGASNASATLLRDKSNSAVALVATAGGASS
NSAQPTTTGKSSAKANISKEQPDRTNSGPQAPVIGSREGAVTLVTMSGVS
NESAYLVRISSEGAPASVATSGGASSDSAQPNVIGISSVKAKISKTHLDR
TNLGSQASVIGSREGAAISVTTPGASSGSATLVRDSSKGALASIATSGRA
SSDSAQPAATGKSSAKAKISNKQPGSASSGSLISSIGSRECVTTSFTAQG
ASSGSSGSATSVTGGSEGAATMVTTIGTSSNSAPPAPADTSSSNPVKSSS
RSASEDDGVASGDQKTAGNQKAKETALGVSSDSAQPTATIGTPSSKLCKL
GKRPSSDEKSVAVSVNPKAKRPALAFRFSDPQQSQTARNDGANGNKYSDV
KLTTKGTPRTPLRLGLGYGTGSGSAKKASVKRDFSPSPRIFKTTKRGRPA
DAPRPASSVEEYLANTQRGMEAVASIKSGTVFWIKFSDTKEAWLECGIVV
KVHHKSAKPYEVEWRPYDSSGVELADDPQHRISLLPRLHVSWPSVPSVSP
SPTRRTEQQQSAGSMPKAGTVPKTSSLFIITSKKIKLNVPPIGSWTIVES
SRPWGDLGPFAF*
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