prot_H-paniculata_contig10782.498.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10782.498.1
Unique Nameprot_H-paniculata_contig10782.498.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length546
Homology
BLAST of mRNA_H-paniculata_contig10782.498.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 548 bits (1412), Expect = 2.540e-178
Identity = 300/550 (54.55%), Postives = 354/550 (64.36%), Query Frame = 0
Query:    1 ADPSWSAELLARVAEGLGLVLERPGGVKGCCVPGMWCGTHGCYTLAVGNWFSNHGGYVGMPADEYSVYTCVESGLSPSSGSXXXXXXXXXXXXXXXXXVSHDNPQFGQAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXTIISVNPDVAKSGEALTLVGSGFGEDREAVRVMVGGRECRDPELCHRVCRPCDENRXXXXXXMCANDDLTKDKVCLPLCDGPKASCPCEHRCLPRQFEVQGMP--LEVNLCRPPDADPNFLCHGSVLREQERIQCTVPVLTWDQAETEVFQHVGIDRGLLHERGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSVAVGNRAAVWRAGVAYAPNGCRSAGDCDDGDACSFDACVKRQCVHNAVEEGYGCQAQPTSVVSRGDVYRYFQALDKADPLEHKEFVRMMQAESKRSSVTGVDDYPVESHKWDTVFPIFGTKYNELFISPNGAVFVSS------GKSSAVSPSTEAFFPVLQADWNPSNGQASSAVLLMIEEEHFSVLYQDVFLFRK 542
            A P WS  L+  VA GLGL LERPGG+ GCCVPGMWCG  GCYTLA G+ FSN+GGYVG+P D+YS+YTC E  +  ++ +                  S   P    A                             TI+SV P+V K+GEAL +VGSGFGE    VRVMVGGR+CRDPELCH VCRPC E        MC  D L+K+KVCLP+CDG + SCPC+HRCLP++FE+QG P  + VNLCRPPDADPNFLCHGSVLREQERIQCTVPVL WDQAETE     G   G      +G                         XXXXXXXXXXXX          S S++VG+R AVW   V YAP  C SA DCDDGDACSFDACV+  CVH  V+EGYGCQAQP     RGD YRYFQ +D+ADP+E  EFV  ++A++K SSVT  DDYPVE H W   FP++GTKY +++ISPNGA+FV        G  SAVSPSTEA+FPVL+ADWNPS+ +A+S+VL+MIEE+ FSVLYQDVFLF++
Sbjct:  115 ARPLWSENLVTVVANGLGLELERPGGLAGCCVPGMWCGPRGCYTLAFGDTFSNYGGYVGVPPDDYSIYTCKEPSVPLAAPADSSTPAPAVNGSDPGDAASA--PGSTTAALPTLSPTAPAAEVEEKAGDGSPAPPVRPTIVSVGPEVVKAGEALMVVGSGFGEAVSDVRVMVGGRDCRDPELCHLVCRPCGEEDRCEFDEMCMEDGLSKEKVCLPICDGTEGSCPCDHRCLPKRFELQGEPHSMVVNLCRPPDADPNFLCHGSVLREQERIQCTVPVLVWDQAETESSDRAGAGLGQKPPVRRGRHLDGDGRRGGERVEGRGVVEGEGEXXXXXXXXXXXXELSAA-----SFSLSVGDRGAVWEGSVEYAPRDCHSAEDCDDGDACSFDACVEGSCVHTGVQEGYGCQAQPVHATWRGDTYRYFQIVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNWRE-FPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVMIEEDQFSVLYQDVFLFKR 656          
BLAST of mRNA_H-paniculata_contig10782.498.1 vs. uniprot
Match: A0A6H5L2U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.920e-75
Identity = 130/256 (50.78%), Postives = 152/256 (59.38%), Query Frame = 0
Query:    1 ADPSWSAELLARVAEGLGLVLERPGGVKGCCVPGMWCGTHGCYTLAVGNWFSNHGGYVGMPADEYSVYTCVESGLSPSSGSXXXXXXXXXXXXXXXXXVSHDNPQFGQAKGXXXXXXXXXXXXXXXXXXXXXXXXXXX--TIISVNPDVAKSGEALTLVGSGFGEDREAVRVMVGGRECRDPELCHRVCRPCDENRXXXXXXMCANDDLTKDKVCLPLCDGPKASCPCEHRCLPRQFEVQGMP--LEVNLCRPPDA 252
            A P WS  LL  +A GLGL LER GG+ GCCVPGMWCG  GCYTLA G+ FSN+GGYVG+PAD+YS+YTC E    PS                     SH     G                                 T++SV P+V K+GEAL +VGSGFGE    VRVMVGGR+CRDPELCH VCRPC E        MC  D L+K+KVCLP+CDG + SCPC+HRCLP++FE+QG P  + VNLCRPPDA
Sbjct:  127 AQPLWSENLLTVIANGLGLELERSGGLAGCCVPGMWCGPRGCYTLAFGDTFSNYGGYVGVPADDYSIYTCKE----PSVPLAAPVDSSTPAPAVNGSDPSHAASAHGSTTAALPTLSPTAPAAEVGEEAGDGSPAPPVRPTVVSVGPEVVKAGEALMVVGSGFGEAVSDVRVMVGGRDCRDPELCHLVCRPCGEEDRCEFDEMCMEDGLSKEKVCLPICDGTEGSCPCDHRCLPKRFELQGEPHSMVVNLCRPPDA 378          
BLAST of mRNA_H-paniculata_contig10782.498.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.190e-34
Identity = 75/125 (60.00%), Postives = 99/125 (79.20%), Query Frame = 0
Query:  424 QALDKADPLEHKEFVRMMQAESKRSSVTGVDDYPVESHKWDTVFPIFGTKYNELFISPNGAVFVSS------GKSSAVSPSTEAFFPVLQADWNPSNGQASSAVLLMIEEEHFSVLYQDVFLFRK 542
            Q +D+ADP+E  EFV  ++A++K SSVT  DDYPVE H W   FP++GTKY +++ISPNGA+FV        G  SAVSPSTEA+FPVL+ADWNPS+ +A+S+VL++IEE+ FSVLYQDVFLF++
Sbjct:   18 QIVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNWRE-FPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVVIEEDQFSVLYQDVFLFKR 141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10782.498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI05_ECTSI2.540e-17854.55RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L2U7_9PHAE1.920e-7550.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LLL6_9PHAE1.190e-3460.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 121..183
e-value: 4.8E-7
score: 31.5
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 136..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10782contigH-paniculata_contig10782:835..8316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10782.498.1mRNA_H-paniculata_contig10782.498.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10782 835..8316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10782.498.1 ID=prot_H-paniculata_contig10782.498.1|Name=mRNA_H-paniculata_contig10782.498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=546bp
ADPSWSAELLARVAEGLGLVLERPGGVKGCCVPGMWCGTHGCYTLAVGNW
FSNHGGYVGMPADEYSVYTCVESGLSPSSGSSSGSSSNSTNSGSGGGAVS
HDNPQFGQAKGKERHDEQEQEEGKGSSSSPAVPYPPPPTIISVNPDVAKS
GEALTLVGSGFGEDREAVRVMVGGRECRDPELCHRVCRPCDENRPCDFDE
MCANDDLTKDKVCLPLCDGPKASCPCEHRCLPRQFEVQGMPLEVNLCRPP
DADPNFLCHGSVLREQERIQCTVPVLTWDQAETEVFQHVGIDRGLLHERG
QGHGRRRRDVDNEHGHSGWPREAEHDQEERGGASATATAARGSGGDSRAS
VSVAVGNRAAVWRAGVAYAPNGCRSAGDCDDGDACSFDACVKRQCVHNAV
EEGYGCQAQPTSVVSRGDVYRYFQALDKADPLEHKEFVRMMQAESKRSSV
TGVDDYPVESHKWDTVFPIFGTKYNELFISPNGAVFVSSGKSSAVSPSTE
AFFPVLQADWNPSNGQASSAVLLMIEEEHFSVLYQDVFLFRKVTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR014756Ig_E-set